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mats for interm pathway scripting

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Alexander Pico 2020-03-19 16:03:42 -07:00
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intermediate-pathway-scripting/lung.up.csv Normal file
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"","x"
"1","YBX2"
"2","DLX6"
"3","CELSR3"
"4","PAX7"
"5","SYT7"
"6","ANLN"
"7","GABRA3"
"8","ABCC2"
"9","DEPDC1"
"10","INSRR"
"11","ARNTL2"
"12","HMGB3"
"13","DEPDC1B"
"14","ZIC2"
"15","MAGEC2"
"16","POLQ"
"17","STYK1"
"18","COL11A1"
"19","SPAG4"
"20","VMP1"
"21","MCM10"
"22","ASPM"
"23","PHKA1"
"24","TRIP13"
"25","HMMR"
"26","PPP2R2C"
"27","KCNQ2"
"28","SPAG5"
"29","UBE2T"
"30","FAP"
"31","RBFOX1"
"32","PTPRH"
"33","NDC80"
"34","NKAIN1"
"35","IGSF9"
"36","RAD54L"
"37","TMPRSS11E"
"38","PTHLH"
"39","DNMT3B"
"40","TPX2"
"41","FER1L4"
"42","BIRC5"
"43","KIF4A"
"44","DLL3"
"45","ORC6"
"46","RGS17"
"47","CDC6"
"48","MMP11"
"49","COCH"
"50","POLE2"
"51","GINS1"
"52","MYBL2"
"53","PABPC1L"
"54","SALL4"
"55","EEF1A2"
"56","FERMT1"
"57","FAM83D"
"58","SRPX2"
"59","CENPI"
"60","RHBDL1"
"61","SALL1"
"62","OIP5"
"63","MCM4"
"64","FSD1"
"65","MAST1"
"66","STX1A"
"67","EZH2"
"68","LHX2"
"69","CA9"
"70","EBF3"
"71","DNAJC12"
"72","GALNT7"
"73","NEIL3"
"74","NCAPG"
"75","KIAA1549L"
"76","FOXM1"
"77","PRR4"
"78","CDCA3"
"79","TTK"
"80","POLR3G"
"81","ECT2"
"82","CENPA"
"83","FHL2"
"84","ABCB6"
"85","RALGPS2"
"86","AGMAT"
"87","SLC2A1"
"88","CDC20"
"89","NEK2"
"90","CENPF"
"91","KIF14"
"92","ATP10B"
"93","ONECUT2"
"94","HELLS"
"95","TMEM156"
"96","PAEP"
"97","TWIST1"
"98","CENPK"
"99","STIL"
"100","HJURP"
"101","COL10A1"
"102","WFDC3"
"103","OR2B6"
"104","C1orf61"
"105","DLGAP5"
"106","SYNGR3"
"107","VIL1"
"108","GNGT1"
"109","PAICS"
"110","PPAT"
"111","ADM2"
"112","BAIAP2L2"
"113","VGF"
"114","E2F8"
"115","EGLN3"
"116","SGO1"
"117","FAM155B"
"118","GINS2"
"119","BARX1"
"120","CA6"
"121","TOP2A"
"122","RHBG"
"123","KHDC4"
"124","FCRL2"
"125","C1QTNF6"
"126","CCNB1"
"127","CDCA8"
"128","TCN1"
"129","ACRV1"
"130","GOLM1"
"131","PSAT1"
"132","TROAP"
"133","B4GALNT1"
"134","IGF2BP3"
"135","BRIP1"
"136","ARHGEF39"
"137","TFAP2A"
"138","SLCO5A1"
"139","SULF1"
"140","KIF23"
"141","KNL1"
"142","ITPKA"
"143","BCL2L10"
"144","CGREF1"
"145","KIF11"
"146","CEP55"
"147","GPR87"
"148","ADAMTS14"
"149","DNA2"
"150","CILP"
"151","CENPE"
"152","GCNT3"
"153","PIF1"
"154","FANCI"
"155","PMAIP1"
"156","PLPP2"
"157","SLC2A5"
"158","PLK4"
"159","KIF2C"
"160","NUF2"
"161","FCRL5"
"162","CRABP2"
"163","KCNH1"
"164","HHIPL2"
"165","CDCA7"
"166","DLX1"
"167","CCDC150"
"168","ABCA12"
"169","TRPM8"
"170","OCIAD2"
"171","CCNA2"
"172","LGSN"
"173","TPBG"
"174","ZC3HAV1L"
"175","FAM83A"
"176","CDKN2A"
"177","MKI67"
"178","ADAM12"
"179","CHEK1"
"180","HMGA2"
"181","SLC7A11"
"182","CENPU"
"183","PDK1"
"184","SPOCK1"
"185","CABYR"
"186","EME1"
"187","EPHB1"
"188","MAGEC1"
"189","SLC24A2"
"190","CXCL13"
"191","GLYATL2"
"192","FBXO32"
"193","BUB1B"
"194","TMEM171"
"195","LRP8"
"196","CCNB2"
"197","DPYSL5"
"198","XDH"
"199","HIST1H2BD"
"200","CDC25C"
"201","HIST1H4H"
"202","DONSON"
"203","CILP2"
"204","TFF1"
"205","RECQL4"
"206","SPC24"
"207","TEDC2"
"208","AK4"
"209","AKR7A3"
"210","FLVCR1"
"211","KIF26B"
"212","LINC01116"
"213","TRIM46"
"214","TSACC"
"215","CRYBA2"
"216","AIM2"
"217","KIF15"
"218","MAD2L1"
"219","SFXN1"
"220","IL31RA"
"221","STEAP1"
"222","SP8"
"223","CTHRC1"
"224","MELK"
"225","TSHR"
"226","PGM2L1"
"227","SLC16A9"
"228","GJB2"
"229","SKA3"
"230","E2F7"
"231","TAF1D"
"232","GLB1L3"
"233","GPT2"
"234","PPP1R14D"
"235","NETO1"
"236","HTR3A"
"237","PLK1"
"238","GREM1"
"239","TTYH1"
"240","KLK6"
"241","RAB26"
"242","PBK"
"243","COL3A1"
"244","GDNF"
"245","SOX14"
"246","RAB3B"
"247","COL22A1"
"248","CKAP2L"
"249","BUB1"
"250","ONECUT1"
"251","CDK1"
"252","CST1"
"253","HOXB9"
"254","HS6ST2"
"255","P2RY6"
"256","RRM2"
"257","FRMD5"
"258","MTBP"
"259","C5orf34"
"260","FUT9"
"261","MYEOV"
"262","SYT12"
"263","C11orf86"
"264","MUC13"
"265","SPTBN2"
"266","NWD2"
"267","EXO1"
"268","ANKRD36C"
"269","IL20RB"
"270","LEP"
"271","UBE2C"
"272","MARCKSL1"
"273","ANKS4B"
"274","RMI2"
"275","ETV4"
"276","FAM172BP"
"277","GPX2"
"278","ATAD5"
"279","FUT2"
"280","CD19"
"281","DNAJC22"
"282","CPNE7"
"283","ANKRD18A"
"284","EMC3-AS1"
"285","NQO1"
"286","B4GALNT4"
"287","GALNT9"
"288","PYCR1"
"289","EPHA10"
"290","IQGAP3"
"291","KNTC1"
"292","POU3F2"
"293","CDCA2"
"294","PARPBP"
"295","PRAME"
"296","DNAH14"
"297","KIF18B"
"298","SAPCD2"
"299","THBS2"
"300","HPDL"
"301","ERCC6L"
"302","TNFRSF18"
"303","TMPRSS11A"
"304","BAGE2"
"305","HIST1H1C"
"306","ENTPD8"
"307","ATP2A1"
"308","XRCC2"
"309","HIST1H2AI"
"310","S100A2"
"311","HIST1H2AG"
"312","HIST1H2AD"
"313","SCN8A"
"314","HIST1H4C"
"315","DMBX1"
"316","PRB3"
"317","AKR1B10"
"318","EPS8L3"
"319","ARHGAP11A"
"320","SNORA73B"
"321","SNORA23"
"322","ZYG11A"
"323","LINC01270"
"324","IGFL2"
"325","FAM83A-AS1"
"326","LGR4"
"327","AKR7L"
"328","IGHG4"
"329","IGHG1"
"330","PPP1R14BP2"
"331","GPC2"
"332","LINC02418"
"333","VAC14-AS1"
"334","UBE2QL1"
"335","TNFRSF25"
"336","LINC01983"
"337","HAGLROS"
"338","PSMD10P2"
"339","AKR1B15"
"340","LINC02474"
"341","NKX1-2"
"342","ANKRD36BP2"
"343","FEZF1-AS1"
"344","FOXD3-AS1"
"345","DLX6-AS1"
"346","LINC00665"
"347","LINC01271"
"348","LINC02535"
"349","DSCAM-AS1"
"350","RPSAP52"
"351","SNHG3"
"352","CCDC169"
"353","MNX1-AS1"
"354","RPL18P13"
"355","LINC00461"
"356","LINC02014"
"357","LUCAT1"
"358","LINC02362"
"359","LINC01234"
"360","LINC00942"
"361","PVT1"
"362","SCARNA13"
"363","BBOX1-AS1"
"364","MEX3A"
"365","SNHG1"
"366","LINC00346"
"367","SALL3"
"368","POLG2"
"369","TUBB3"
"370","LINC02544"
"371","VPS9D1-AS1"
"372","LINC01977"
"373","RUNDC3A-AS1"
"374","AFAP1-AS1"
"375","LHX1"
"376","UHRF1"
"377","HIST1H2BF"
"378","NEFL"
"379","RDM1"
"380","HIST1H2AM"
"381","LINC01395"
"382","HELLPAR"
"383","SNHG4"
1 x
2 1 YBX2
3 2 DLX6
4 3 CELSR3
5 4 PAX7
6 5 SYT7
7 6 ANLN
8 7 GABRA3
9 8 ABCC2
10 9 DEPDC1
11 10 INSRR
12 11 ARNTL2
13 12 HMGB3
14 13 DEPDC1B
15 14 ZIC2
16 15 MAGEC2
17 16 POLQ
18 17 STYK1
19 18 COL11A1
20 19 SPAG4
21 20 VMP1
22 21 MCM10
23 22 ASPM
24 23 PHKA1
25 24 TRIP13
26 25 HMMR
27 26 PPP2R2C
28 27 KCNQ2
29 28 SPAG5
30 29 UBE2T
31 30 FAP
32 31 RBFOX1
33 32 PTPRH
34 33 NDC80
35 34 NKAIN1
36 35 IGSF9
37 36 RAD54L
38 37 TMPRSS11E
39 38 PTHLH
40 39 DNMT3B
41 40 TPX2
42 41 FER1L4
43 42 BIRC5
44 43 KIF4A
45 44 DLL3
46 45 ORC6
47 46 RGS17
48 47 CDC6
49 48 MMP11
50 49 COCH
51 50 POLE2
52 51 GINS1
53 52 MYBL2
54 53 PABPC1L
55 54 SALL4
56 55 EEF1A2
57 56 FERMT1
58 57 FAM83D
59 58 SRPX2
60 59 CENPI
61 60 RHBDL1
62 61 SALL1
63 62 OIP5
64 63 MCM4
65 64 FSD1
66 65 MAST1
67 66 STX1A
68 67 EZH2
69 68 LHX2
70 69 CA9
71 70 EBF3
72 71 DNAJC12
73 72 GALNT7
74 73 NEIL3
75 74 NCAPG
76 75 KIAA1549L
77 76 FOXM1
78 77 PRR4
79 78 CDCA3
80 79 TTK
81 80 POLR3G
82 81 ECT2
83 82 CENPA
84 83 FHL2
85 84 ABCB6
86 85 RALGPS2
87 86 AGMAT
88 87 SLC2A1
89 88 CDC20
90 89 NEK2
91 90 CENPF
92 91 KIF14
93 92 ATP10B
94 93 ONECUT2
95 94 HELLS
96 95 TMEM156
97 96 PAEP
98 97 TWIST1
99 98 CENPK
100 99 STIL
101 100 HJURP
102 101 COL10A1
103 102 WFDC3
104 103 OR2B6
105 104 C1orf61
106 105 DLGAP5
107 106 SYNGR3
108 107 VIL1
109 108 GNGT1
110 109 PAICS
111 110 PPAT
112 111 ADM2
113 112 BAIAP2L2
114 113 VGF
115 114 E2F8
116 115 EGLN3
117 116 SGO1
118 117 FAM155B
119 118 GINS2
120 119 BARX1
121 120 CA6
122 121 TOP2A
123 122 RHBG
124 123 KHDC4
125 124 FCRL2
126 125 C1QTNF6
127 126 CCNB1
128 127 CDCA8
129 128 TCN1
130 129 ACRV1
131 130 GOLM1
132 131 PSAT1
133 132 TROAP
134 133 B4GALNT1
135 134 IGF2BP3
136 135 BRIP1
137 136 ARHGEF39
138 137 TFAP2A
139 138 SLCO5A1
140 139 SULF1
141 140 KIF23
142 141 KNL1
143 142 ITPKA
144 143 BCL2L10
145 144 CGREF1
146 145 KIF11
147 146 CEP55
148 147 GPR87
149 148 ADAMTS14
150 149 DNA2
151 150 CILP
152 151 CENPE
153 152 GCNT3
154 153 PIF1
155 154 FANCI
156 155 PMAIP1
157 156 PLPP2
158 157 SLC2A5
159 158 PLK4
160 159 KIF2C
161 160 NUF2
162 161 FCRL5
163 162 CRABP2
164 163 KCNH1
165 164 HHIPL2
166 165 CDCA7
167 166 DLX1
168 167 CCDC150
169 168 ABCA12
170 169 TRPM8
171 170 OCIAD2
172 171 CCNA2
173 172 LGSN
174 173 TPBG
175 174 ZC3HAV1L
176 175 FAM83A
177 176 CDKN2A
178 177 MKI67
179 178 ADAM12
180 179 CHEK1
181 180 HMGA2
182 181 SLC7A11
183 182 CENPU
184 183 PDK1
185 184 SPOCK1
186 185 CABYR
187 186 EME1
188 187 EPHB1
189 188 MAGEC1
190 189 SLC24A2
191 190 CXCL13
192 191 GLYATL2
193 192 FBXO32
194 193 BUB1B
195 194 TMEM171
196 195 LRP8
197 196 CCNB2
198 197 DPYSL5
199 198 XDH
200 199 HIST1H2BD
201 200 CDC25C
202 201 HIST1H4H
203 202 DONSON
204 203 CILP2
205 204 TFF1
206 205 RECQL4
207 206 SPC24
208 207 TEDC2
209 208 AK4
210 209 AKR7A3
211 210 FLVCR1
212 211 KIF26B
213 212 LINC01116
214 213 TRIM46
215 214 TSACC
216 215 CRYBA2
217 216 AIM2
218 217 KIF15
219 218 MAD2L1
220 219 SFXN1
221 220 IL31RA
222 221 STEAP1
223 222 SP8
224 223 CTHRC1
225 224 MELK
226 225 TSHR
227 226 PGM2L1
228 227 SLC16A9
229 228 GJB2
230 229 SKA3
231 230 E2F7
232 231 TAF1D
233 232 GLB1L3
234 233 GPT2
235 234 PPP1R14D
236 235 NETO1
237 236 HTR3A
238 237 PLK1
239 238 GREM1
240 239 TTYH1
241 240 KLK6
242 241 RAB26
243 242 PBK
244 243 COL3A1
245 244 GDNF
246 245 SOX14
247 246 RAB3B
248 247 COL22A1
249 248 CKAP2L
250 249 BUB1
251 250 ONECUT1
252 251 CDK1
253 252 CST1
254 253 HOXB9
255 254 HS6ST2
256 255 P2RY6
257 256 RRM2
258 257 FRMD5
259 258 MTBP
260 259 C5orf34
261 260 FUT9
262 261 MYEOV
263 262 SYT12
264 263 C11orf86
265 264 MUC13
266 265 SPTBN2
267 266 NWD2
268 267 EXO1
269 268 ANKRD36C
270 269 IL20RB
271 270 LEP
272 271 UBE2C
273 272 MARCKSL1
274 273 ANKS4B
275 274 RMI2
276 275 ETV4
277 276 FAM172BP
278 277 GPX2
279 278 ATAD5
280 279 FUT2
281 280 CD19
282 281 DNAJC22
283 282 CPNE7
284 283 ANKRD18A
285 284 EMC3-AS1
286 285 NQO1
287 286 B4GALNT4
288 287 GALNT9
289 288 PYCR1
290 289 EPHA10
291 290 IQGAP3
292 291 KNTC1
293 292 POU3F2
294 293 CDCA2
295 294 PARPBP
296 295 PRAME
297 296 DNAH14
298 297 KIF18B
299 298 SAPCD2
300 299 THBS2
301 300 HPDL
302 301 ERCC6L
303 302 TNFRSF18
304 303 TMPRSS11A
305 304 BAGE2
306 305 HIST1H1C
307 306 ENTPD8
308 307 ATP2A1
309 308 XRCC2
310 309 HIST1H2AI
311 310 S100A2
312 311 HIST1H2AG
313 312 HIST1H2AD
314 313 SCN8A
315 314 HIST1H4C
316 315 DMBX1
317 316 PRB3
318 317 AKR1B10
319 318 EPS8L3
320 319 ARHGAP11A
321 320 SNORA73B
322 321 SNORA23
323 322 ZYG11A
324 323 LINC01270
325 324 IGFL2
326 325 FAM83A-AS1
327 326 LGR4
328 327 AKR7L
329 328 IGHG4
330 329 IGHG1
331 330 PPP1R14BP2
332 331 GPC2
333 332 LINC02418
334 333 VAC14-AS1
335 334 UBE2QL1
336 335 TNFRSF25
337 336 LINC01983
338 337 HAGLROS
339 338 PSMD10P2
340 339 AKR1B15
341 340 LINC02474
342 341 NKX1-2
343 342 ANKRD36BP2
344 343 FEZF1-AS1
345 344 FOXD3-AS1
346 345 DLX6-AS1
347 346 LINC00665
348 347 LINC01271
349 348 LINC02535
350 349 DSCAM-AS1
351 350 RPSAP52
352 351 SNHG3
353 352 CCDC169
354 353 MNX1-AS1
355 354 RPL18P13
356 355 LINC00461
357 356 LINC02014
358 357 LUCAT1
359 358 LINC02362
360 359 LINC01234
361 360 LINC00942
362 361 PVT1
363 362 SCARNA13
364 363 BBOX1-AS1
365 364 MEX3A
366 365 SNHG1
367 366 LINC00346
368 367 SALL3
369 368 POLG2
370 369 TUBB3
371 370 LINC02544
372 371 VPS9D1-AS1
373 372 LINC01977
374 373 RUNDC3A-AS1
375 374 AFAP1-AS1
376 375 LHX1
377 376 UHRF1
378 377 HIST1H2BF
379 378 NEFL
380 379 RDM1
381 380 HIST1H2AM
382 381 LINC01395
383 382 HELLPAR
384 383 SNHG4