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add part 2

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Natalie Elphick 2023-04-16 21:12:31 -07:00
parent d6aa2d5bec
commit 47920f7348
6 changed files with 1594 additions and 1527 deletions
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11
intro-unix-command-line/materials/example_script.sh Normal file
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#!/bin/bash
# This is a comment. Comments are ignored by the shell.
# $1 is the first argument passed to the script
echo "Counting the genes in $1"
# count the unique genes in the file
u_genes=$(gunzip -c $1 | cut -f 1 | sort -u | wc -l)
echo "There are $u_genes unique genes in $1"