From 86a7de10771be718faa4f8cdf41206a580f17008 Mon Sep 17 00:00:00 2001
From: Natalie Elphick <natalie.elphick@gladstone.ucsf.edu>
Date: Wed, 27 Mar 2024 13:48:44 -0700
Subject: [PATCH] add a command to check the nextflow install

---
 docs/Working_on_Wynton_Part_1.html                 | 3 ++-
 working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd | 1 +
 2 files changed, 3 insertions(+), 1 deletion(-)

diff --git a/docs/Working_on_Wynton_Part_1.html b/docs/Working_on_Wynton_Part_1.html
index b9cdf5a..2f805ff 100644
--- a/docs/Working_on_Wynton_Part_1.html
+++ b/docs/Working_on_Wynton_Part_1.html
@@ -1008,7 +1008,8 @@ system</li>
 [alice@dev1 ~]$ exit
 [alice@log1 ~]$ ssh dev1
 [alice@dev1 ~]$ sdk install java 17.0.6-tem
-[alice@dev1 ~]$ wget -qO- https://get.nextflow.io | bash</code></pre>
+[alice@dev1 ~]$ wget -qO- https://get.nextflow.io | bash
+[alice@dev1 ~]$ nextflow -v</code></pre>
 </section></section>
 <section>
 <section id="containers" class="title-slide slide level1">
diff --git a/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd b/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
index 4fbc490..88b95f1 100644
--- a/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
+++ b/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
@@ -367,6 +367,7 @@ echo '[alice@dev1 ~]$ exit'
 echo '[alice@log1 ~]$ ssh dev1'
 echo '[alice@dev1 ~]$ sdk install java 17.0.6-tem'
 echo '[alice@dev1 ~]$ wget -qO- https://get.nextflow.io | bash'
+echo '[alice@dev1 ~]$ nextflow -v'
 ```