diff --git a/single-cell-analysis/Session_3/Session3.Rmd b/single-cell-analysis/Session_3/Session3.Rmd index a2e7dfc..d293481 100644 --- a/single-cell-analysis/Session_3/Session3.Rmd +++ b/single-cell-analysis/Session_3/Session3.Rmd @@ -42,12 +42,9 @@ rm(list = ls()) suppressMessages(library(Seurat)) suppressMessages(library(muscat)) suppressMessages(library(SummarizedExperiment)) -suppressMessages(library(dplyr)) +suppressMessages(library(tidyverse)) suppressMessages(library(magrittr)) -suppressMessages(library(purrr)) -suppressMessages(library(tibble)) -suppressMessages(library(gdata)) -suppressMessages(library(tidyr)) + #source a function I slightly modified from the muscat package for the within-cluster multi-sample multi-condition comparison source("pbDS_update.R")