diff --git a/intro-unix-command-line/DATA.xcnv b/intro-unix-command-line/DATA.xcnv new file mode 100644 index 0000000..dd5f279 --- /dev/null +++ b/intro-unix-command-line/DATA.xcnv @@ -0,0 +1,3145 @@ +SAMPLE CNV INTERVAL KB CHR MID_BP TARGETS NUM_TARG Q_EXACT Q_SOME Q_NON_DIPLOID Q_START Q_STOP MEAN_RD MEAN_ORIG_RD +Sample_1013F DEL chr1:14970-70008 55.04 chr1 42489 2..5 4 28 39 39 8 32 -3.87 44.12 +Sample_1013F DEL chr1:12851546-12888664 37.12 chr1 12870105 1602..1608 7 34 99 99 33 6 -3.89 61.68 +Sample_1013F DUP chr1:12916941-12920126 3.19 chr1 12918533 1613..1615 3 14 54 54 4 21 5.11 108.38 +Sample_1013F DEL chr1:16918342-17046652 128.31 chr1 16982497 1955..1977 23 8 71 99 4 14 -4.32 108.26 +Sample_1013F DEL chr1:17271957-17273486 1.53 chr1 17272721 2001..2003 3 24 48 48 8 4 -4.92 156.91 +Sample_1013F DUP chr1:145301720-145368682 66.96 chr1 145335201 8404..8413 10 3 99 99 9 4 3.81 74.32 +Sample_1013F DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 47 98 99 29 11 -5.81 36.10 +Sample_1013F DEL chr5:21495207-21497349 2.14 chr5 21496278 37853..37854 2 19 45 45 17 5 -6.51 35.18 +Sample_1013F DEL chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 30 99 99 6 18 -4.19 19.63 +Sample_1013F DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 12 95 99 34 5 5.98 101.97 +Sample_1013F DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 80 94 95 91 53 8.25 101.03 +Sample_1013F DUP chr9:90747881-90748584 0.70 chr9 90748232 61296..61297 2 34 59 59 4 3 6.97 134.36 +Sample_1013F DEL chr9:117072829-117087432 14.60 chr9 117080130 62578..62583 6 2 58 58 2 5 -3.34 41.92 +Sample_1013F DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 76 97 99 29 34 8.47 211.24 +Sample_1013F DUP chr10:135267432-135439108 171.68 chr10 135353270 70960..70988 29 6 99 99 8 3 3.29 89.11 +Sample_1013F DUP chr11:18955361-18956549 1.19 chr11 18955955 72915..72915 1 31 31 31 6 27 10.00 163.46 +Sample_1013F DEL chr12:9447028-9447570 0.54 chr12 9447299 81112..81113 2 22 31 31 5 18 -5.98 103.53 +Sample_1013F DUP chr12:9572789-9578716 5.93 chr12 9575752 81135..81142 8 3 99 99 2 13 4.00 96.32 +Sample_1013F DUP chr12:9589543-9590085 0.54 chr12 9589814 81149..81150 2 65 88 88 47 29 8.19 109.46 +Sample_1013F DUP chr12:31249275-31249924 0.65 chr12 31249599 81840..81842 3 31 31 31 4 31 4.52 173.45 +Sample_1013F DUP chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 11 79 99 31 38 4.37 70.87 +Sample_1013F DUP chr15:23261763-23300167 38.41 chr15 23280965 94422..94426 5 4 99 99 4 21 5.03 137.75 +Sample_1013F DUP chr15:23444007-23444098 0.09 chr15 23444052 94438..94438 1 31 31 31 19 31 10.00 182.11 +Sample_1013F DUP chr15:30395935-30659730 263.80 chr15 30527832 94686..94688 3 7 32 32 30 7 4.96 88.01 +Sample_1013F DEL chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 36 99 99 18 25 -4.77 30.38 +Sample_1013F DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 99 99 99 5 31 -10.00 138.74 +Sample_1013F DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 48 72 72 26 38 7.36 70.06 +Sample_1013F DUP chr15:102513423-102514309 0.89 chr15 102513866 99267..99268 2 83 99 99 32 17 8.96 96.63 +Sample_1013F DEL chr16:1275207-1280185 4.98 chr16 1277696 99709..99713 5 4 99 99 4 27 -4.80 41.07 +Sample_1013F DUP chr16:1291154-1306688 15.54 chr16 1298921 99715..99719 5 5 78 78 27 5 4.08 152.59 +Sample_1013F DEL chr16:70162862-70195184 32.32 chr16 70179023 104883..104895 13 18 63 63 5 1 -2.45 34.68 +Sample_1013F DEL chr16:74394531-74444530 50.00 chr16 74419530 105289..105294 6 8 99 99 8 11 -5.07 59.59 +Sample_1013F DEL chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 80 87 87 8 27 -8.20 95.27 +Sample_1013F DUP chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 8 98 99 8 43 4.68 114.58 +Sample_1013F DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 57 99 99 31 8 -8.17 81.31 +Sample_1013F DEL chr17:60344494-60345600 1.11 chr17 60345047 113674..113676 3 11 42 42 19 10 -4.83 92.65 +Sample_1013F DUP chr19:49519804-49526457 6.65 chr19 49523130 126638..126640 3 5 96 98 5 5 6.20 153.08 +Sample_1013F DEL chr19:54724025-54726002 1.98 chr19 54725013 127861..127864 4 21 51 51 24 12 -4.21 19.58 +Sample_1013F DUP chr19:54745452-54756412 10.96 chr19 54750932 127866..127873 8 3 89 89 12 3 3.23 85.36 +Sample_1013F DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 39 99 99 6 19 -6.84 57.46 +Sample_1013F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 33 99 99 30 12 -4.61 18.43 +Sample_1013F DEL chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 7 52 52 4 11 -3.06 33.35 +Sample_1013F DEL chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 48 99 99 27 28 -5.39 28.36 +Sample_1013M DEL chr1:16913545-17275421 361.88 chr1 17094483 1952..2005 54 25 99 99 3 14 -4.58 77.64 +Sample_1013M DUP chr1:25611064-25629950 18.89 chr1 25620507 3041..3045 5 40 41 41 14 7 3.52 61.93 +Sample_1013M DEL chr1:161575849-161601158 25.31 chr1 161588503 11056..11060 5 20 49 49 4 20 -3.55 24.37 +Sample_1013M DEL chr3:48618881-48621213 2.33 chr3 48620047 27194..27205 12 7 34 34 19 8 -2.33 95.00 +Sample_1013M DUP chr5:140165876-140596993 431.12 chr5 140381434 40578..40607 30 8 99 99 12 2 2.50 90.50 +Sample_1013M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 22 99 99 8 17 -4.65 61.06 +Sample_1013M DEL chr7:72418838-72420500 1.66 chr7 72419669 50664..50668 5 33 99 99 15 3 -5.32 55.60 +Sample_1013M DUP chr7:74191613-74306731 115.12 chr7 74249172 50908..50916 9 5 62 62 4 5 2.86 79.07 +Sample_1013M DUP chr7:74578702-75048725 470.02 chr7 74813713 50926..50935 10 6 99 99 7 6 3.75 83.63 +Sample_1013M DEL chr7:143883677-144070377 186.70 chr7 143977027 54230..54236 7 4 49 49 3 25 -3.14 16.90 +Sample_1013M DUP chr8:7305276-7320381 15.11 chr8 7312828 55179..55182 4 5 32 32 6 12 3.68 49.02 +Sample_1013M DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 10 99 99 23 10 3.95 75.84 +Sample_1013M DEL chr10:46963840-47088319 124.48 chr10 47026079 66733..66741 9 5 70 70 5 13 -2.90 78.86 +Sample_1013M DUP chr11:55029658-55038594 8.94 chr11 55034126 74017..74021 5 3 37 37 3 15 3.32 56.75 +Sample_1013M DUP chr12:9572085-9600768 28.68 chr12 9586426 81133..81151 19 4 99 99 2 21 2.85 66.31 +Sample_1013M DUP chr12:11506008-11546911 40.90 chr12 11526459 81255..81259 5 21 99 99 11 9 4.93 80.19 +Sample_1013M DUP chr15:23282265-23300167 17.90 chr15 23291216 94424..94426 3 22 99 99 3 33 7.71 170.95 +Sample_1013M DUP chr15:30395935-30396211 0.28 chr15 30396073 94686..94686 1 30 30 30 30 30 10.00 108.41 +Sample_1013M DUP chr15:41859558-41865665 6.11 chr15 41862611 95375..95385 11 12 38 38 2 6 2.40 67.43 +Sample_1013M DEL chr15:72958123-72958469 0.35 chr15 72958296 97499..97500 2 55 81 81 3 17 -7.89 42.19 +Sample_1013M DEL chr15:75580599-75581824 1.23 chr15 75581211 97824..97825 2 47 74 74 2 10 -7.55 0.00 +Sample_1013M DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 50 73 73 16 43 7.43 59.59 +Sample_1013M DUP chr16:1280163-1292554 12.39 chr16 1286358 99713..99717 5 4 75 75 32 4 3.99 106.72 +Sample_1013M DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 12 53 53 12 22 -3.32 48.63 +Sample_1013M DUP chr16:69996879-69997887 1.01 chr16 69997383 104859..104860 2 15 35 35 4 6 5.99 92.78 +Sample_1013M DUP chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 52 63 63 4 35 5.20 67.55 +Sample_1013M DEL chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 44 44 44 28 18 -6.53 54.85 +Sample_1013M DUP chr17:18292171-18430160 137.99 chr17 18361165 109353..109365 13 12 98 99 12 12 4.67 68.88 +Sample_1013M DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 47 61 61 5 26 -5.28 8.53 +Sample_1013M DUP chr17:20404829-20407811 2.98 chr17 20406320 109572..109577 6 10 84 84 10 5 3.62 83.96 +Sample_1013M DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 62 99 99 36 0 -8.44 65.71 +Sample_1013M DUP chr17:39405939-39411837 5.90 chr17 39408888 111330..111331 2 10 36 36 0 3 6.30 191.63 +Sample_1013M DEL chr17:60344494-60351477 6.98 chr17 60347985 113674..113682 9 5 89 89 5 19 -3.05 50.58 +Sample_1013M DUP chr19:55247287-55290114 42.83 chr19 55268700 128016..128023 8 7 99 99 13 5 4.20 43.39 +Sample_1013M DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 18 99 99 33 4 3.50 257.66 +Sample_1013M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 61 99 99 23 23 -8.00 24.26 +Sample_1013M DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 12 99 99 20 8 -5.34 0.16 +Sample_1013M DUP chr22:25044121-25049017 4.90 chr22 25046569 135495..135499 5 6 31 31 26 5 3.35 162.13 +Sample_1013M DUP chrX:55101504-55117043 15.54 chrX 55109273 139929..139932 4 5 55 55 5 9 4.14 76.01 +Sample_1013P DEL chr1:12851546-12891264 39.72 chr1 12871405 1602..1609 8 22 99 99 22 34 -3.48 46.64 +Sample_1013P DUP chr1:12918840-12920126 1.29 chr1 12919483 1614..1615 2 50 62 62 34 10 7.26 116.79 +Sample_1013P DEL chr1:16921087-16975287 54.20 chr1 16948187 1958..1967 10 24 99 99 9 2 -3.81 142.23 +Sample_1013P DUP chr1:17090909-17275019 184.11 chr1 17182964 1986..2004 19 5 99 99 5 11 4.49 139.51 +Sample_1013P DUP chr1:45293968-45294984 1.02 chr1 45294476 5387..5390 4 21 41 41 33 21 4.01 150.64 +Sample_1013P DUP chr1:45797838-45798631 0.79 chr1 45798234 5459..5463 5 5 41 41 18 5 3.49 196.41 +Sample_1013P DUP chr1:161520321-161578341 58.02 chr1 161549331 11052..11056 5 17 67 67 6 6 3.90 72.51 +Sample_1013P DEL chr2:114341230-114353780 12.55 chr2 114347505 19699..19704 6 30 99 99 29 7 -4.49 77.17 +Sample_1013P DEL chr2:233244896-233246077 1.18 chr2 233245486 23901..23904 4 21 31 31 25 14 -3.83 74.20 +Sample_1013P DUP chr2:233271996-233274158 2.16 chr2 233273077 23909..23915 7 26 91 91 5 16 3.49 113.53 +Sample_1013P DEL chr3:195392937-195410736 17.80 chr3 195401836 32791..32796 6 3 45 45 10 3 -3.15 37.94 +Sample_1013P DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 28 99 99 15 18 5.27 108.12 +Sample_1013P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 37 99 99 32 35 -6.86 11.33 +Sample_1013P DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 7 80 99 35 0 6.55 90.56 +Sample_1013P DEL chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 44 99 99 1 5 -6.82 0.15 +Sample_1013P DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 82 99 99 26 25 8.70 183.83 +Sample_1013P DEL chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 26 99 99 26 25 -5.91 40.24 +Sample_1013P DUP chr10:135267432-135440299 172.87 chr10 135353865 70960..70989 30 7 99 99 12 8 3.39 77.56 +Sample_1013P DEL chr11:5798891-5810046 11.16 chr11 5804468 71961..71962 2 12 37 37 22 12 -6.16 25.28 +Sample_1013P DUP chr12:9436253-9451458 15.21 chr12 9443855 81110..81115 6 28 47 47 20 20 3.29 75.20 +Sample_1013P DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 45 68 68 13 15 -7.49 59.58 +Sample_1013P DUP chr12:11506008-11508524 2.52 chr12 11507266 81255..81258 4 11 99 99 21 4 5.66 68.73 +Sample_1013P DUP chr15:20771427-20776177 4.75 chr15 20773802 94346..94349 4 46 85 85 45 53 4.86 64.41 +Sample_1013P DEL chr15:23299681-23443575 143.90 chr15 23371628 94425..94437 13 74 99 99 10 35 -4.78 19.01 +Sample_1013P DUP chr15:75557463-75580705 23.24 chr15 75569084 97820..97824 5 42 61 61 16 23 3.84 53.09 +Sample_1013P DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 68 99 99 20 68 7.97 98.58 +Sample_1013P DEL chr16:1279191-1292554 13.36 chr16 1285872 99711..99717 7 43 99 99 43 0 -4.31 68.04 +Sample_1013P DUP chr16:1306273-1308494 2.22 chr16 1307383 99718..99722 5 9 69 69 0 8 3.90 132.41 +Sample_1013P DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 20 86 86 25 19 -5.84 72.24 +Sample_1013P DUP chr17:39273436-39395255 121.82 chr17 39334345 111318..111329 12 20 98 99 14 23 2.82 134.40 +Sample_1013P DEL chr17:60345056-60349349 4.29 chr17 60347202 113675..113680 6 24 74 74 35 14 -3.61 25.18 +Sample_1013P DUP chr19:6896409-7081466 185.06 chr19 6988937 119888..119924 37 3 79 99 3 26 2.41 42.37 +Sample_1013P DUP chr19:49536164-49558997 22.83 chr19 49547580 126645..126655 11 13 46 46 9 13 2.48 101.45 +Sample_1013P DUP chr19:50473069-50484270 11.20 chr19 50478669 127082..127086 5 8 48 48 4 7 3.57 72.95 +Sample_1013P DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 31 10.00 106.83 +Sample_1013P DUP chr21:45948335-46032871 84.54 chr21 45990603 134146..134159 14 4 99 99 5 4 3.18 246.63 +Sample_1013P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 24 49 49 29 19 4.88 115.45 +Sample_1013P DUP chr22:20386517-20398336 11.82 chr22 20392426 134921..134925 5 5 37 37 3 14 3.33 48.85 +Sample_1013P DEL chr22:22975944-22988991 13.05 chr22 22982467 135215..135219 5 29 66 66 19 29 -3.92 97.54 +Sample_1013P DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 11 37 37 11 19 2.91 60.67 +Sample_1013P DUP chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 9 76 76 9 31 3.62 180.19 +Sample_1013P DEL chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 18 99 99 25 11 -4.48 28.00 +Sample_1084F DEL chr1:1387426-1431581 44.16 chr1 1409503 291..316 26 31 99 99 6 28 -3.87 19.06 +Sample_1084F DUP chr1:16919936-17090975 171.04 chr1 17005455 1957..1986 30 13 99 99 12 13 4.07 97.68 +Sample_1084F DEL chr1:17249158-17257892 8.73 chr1 17253525 1988..1994 7 4 61 61 4 12 -3.15 66.39 +Sample_1084F DEL chr1:45797695-45798506 0.81 chr1 45798100 5458..5462 5 17 96 96 13 12 -4.37 78.63 +Sample_1084F DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 17 98 99 39 11 -3.38 35.30 +Sample_1084F DEL chr3:48618881-48621048 2.17 chr3 48619964 27194..27204 11 11 46 46 4 25 -2.47 71.73 +Sample_1084F DEL chr3:49724582-49724911 0.33 chr3 49724746 27609..27610 2 37 60 60 19 36 -7.20 156.19 +Sample_1084F DEL chr3:75470705-75484266 13.56 chr3 75477485 29262..29269 8 41 99 99 71 30 -7.45 35.25 +Sample_1084F DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 19 98 99 14 14 -3.58 24.31 +Sample_1084F DUP chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 29 43 43 13 43 3.90 73.48 +Sample_1084F DUP chr5:177466388-177469226 2.84 chr5 177467807 42444..42446 3 25 31 31 16 7 4.53 64.50 +Sample_1084F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 34 62 62 18 26 -3.82 45.84 +Sample_1084F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 24 42 42 14 22 3.91 50.54 +Sample_1084F DEL chr8:7215499-7320381 104.88 chr8 7267940 55174..55182 9 3 95 99 48 3 -3.44 9.40 +Sample_1084F DEL chr8:12039614-12250923 211.31 chr8 12145268 55315..55320 6 11 77 99 8 8 -4.37 24.10 +Sample_1084F DEL chr8:145619098-145619770 0.67 chr8 145619434 59189..59192 4 6 48 48 27 6 -4.13 57.39 +Sample_1084F DEL chr10:135368855-135369551 0.70 chr10 135369203 70976..70978 3 10 39 39 10 35 -4.77 76.60 +Sample_1084F DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 38 99 99 39 32 3.36 47.43 +Sample_1084F DUP chr15:20776102-21134625 358.52 chr15 20955363 94349..94354 6 15 47 47 20 15 3.45 36.41 +Sample_1084F DUP chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 34 99 99 54 34 3.72 51.15 +Sample_1084F DEL chr15:23299681-23311838 12.16 chr15 23305759 94425..94429 5 22 31 31 7 2 -3.30 34.77 +Sample_1084F DUP chr15:43900061-43903182 3.12 chr15 43901621 95844..95846 3 10 56 56 11 11 5.16 47.20 +Sample_1084F DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 7 49 49 7 36 -4.07 15.15 +Sample_1084F DEL chr16:731881-733909 2.03 chr16 732895 99535..99544 10 3 32 32 3 12 -2.45 60.69 +Sample_1084F DEL chr16:3076680-3077074 0.40 chr16 3076877 100446..100448 3 7 55 55 8 7 -5.14 117.17 +Sample_1084F DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 16 63 63 12 16 -2.57 27.40 +Sample_1084F DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 12 56 56 48 4 2.88 48.34 +Sample_1084F DUP chr17:20354794-20405283 50.49 chr17 20380038 109566..109573 8 3 98 99 2 49 3.88 41.98 +Sample_1084F DEL chr19:10084432-10087287 2.86 chr19 10085859 120562..120566 5 11 46 46 14 11 -3.59 46.76 +Sample_1084F DUP chr19:54745452-54746724 1.27 chr19 54746088 127866..127869 4 5 70 70 5 31 4.50 44.79 +Sample_1084F DEL chr19:54784119-54785033 0.92 chr19 54784576 127892..127894 3 24 32 32 24 14 -4.52 70.33 +Sample_1084F DEL chr21:45953568-46067564 114.00 chr21 46010566 134149..134162 14 8 99 99 8 22 -4.40 126.46 +Sample_1084F DEL chr22:21330940-21332065 1.13 chr22 21331502 135043..135046 4 19 68 68 8 21 -4.52 65.70 +Sample_1084F DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 23 99 99 6 7 3.66 39.65 +Sample_1084F DEL chr22:42899205-42911274 12.07 chr22 42905239 137452..137458 7 12 42 42 4 13 -2.94 22.51 +Sample_1084F DEL chr22:50017826-50020695 2.87 chr22 50019260 137887..137890 4 4 30 30 30 4 -3.67 101.07 +Sample_1084M DEL chr1:17090909-17275421 184.51 chr1 17183165 1986..2005 20 6 99 99 20 6 -3.65 21.79 +Sample_1084M DEL chr3:49849303-49850816 1.51 chr3 49850059 27701..27706 6 22 34 34 22 24 -3.11 42.75 +Sample_1084M DEL chr3:75470705-75480065 9.36 chr3 75475385 29262..29267 6 41 99 99 56 16 -6.25 24.62 +Sample_1084M DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 7 81 81 7 10 -2.50 11.93 +Sample_1084M DUP chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 40 49 49 17 44 4.02 40.76 +Sample_1084M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 17 86 86 7 17 -4.18 23.61 +Sample_1084M DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 3 57 57 13 3 4.14 33.30 +Sample_1084M DEL chr8:11985367-12245528 260.16 chr8 12115447 55312..55318 7 7 99 99 26 3 -4.91 11.18 +Sample_1084M DUP chr16:14968893-14972691 3.80 chr16 14970792 101188..101191 4 47 70 70 23 11 4.56 36.91 +Sample_1084M DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 6 57 57 54 3 2.89 24.69 +Sample_1084M DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 2 99 99 3 4 3.36 18.58 +Sample_1084M DUP chr22:42908124-42952594 44.47 chr22 42930359 137455..137461 7 42 99 99 9 24 4.16 31.80 +Sample_1084P DEL chr1:1387426-1431581 44.16 chr1 1409503 291..316 26 15 99 99 9 12 -3.83 20.46 +Sample_1084P DUP chr1:16918654-16946533 27.88 chr1 16932593 1956..1963 8 76 99 99 10 19 4.30 116.13 +Sample_1084P DUP chr1:17017713-17046652 28.94 chr1 17032182 1969..1977 9 11 79 99 1 9 3.78 66.58 +Sample_1084P DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 39 99 99 14 0 -4.13 79.90 +Sample_1084P DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 19 99 99 0 20 7.05 105.03 +Sample_1084P DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 3 55 55 28 3 3.30 47.80 +Sample_1084P DUP chr2:233272977-233274158 1.18 chr2 233273567 23912..23915 4 25 42 42 11 8 4.01 39.45 +Sample_1084P DEL chr3:48619911-48621213 1.30 chr3 48620562 27199..27205 7 15 54 54 37 15 -3.10 61.82 +Sample_1084P DUP chr6:168344621-168479839 135.22 chr6 168412230 48221..48247 27 11 99 99 9 32 3.56 48.58 +Sample_1084P DUP chr7:142459625-142482397 22.77 chr7 142471011 54058..54064 7 17 99 99 3 21 3.80 53.39 +Sample_1084P DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 7 80 99 5 5 4.20 60.26 +Sample_1084P DUP chr12:9436253-9447570 11.32 chr12 9441911 81110..81113 4 51 86 87 16 11 4.88 72.25 +Sample_1084P DUP chr15:30395935-30665348 269.41 chr15 30530641 94686..94691 6 24 99 99 48 24 4.71 48.32 +Sample_1084P DUP chr16:1280163-1291700 11.54 chr16 1285931 99713..99716 4 57 99 99 6 39 5.44 84.93 +Sample_1084P DUP chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 29 99 99 18 27 3.43 74.46 +Sample_1084P DUP chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 9 79 79 16 9 5.62 89.30 +Sample_1084P DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 10 98 99 8 31 -3.91 22.29 +Sample_1084P DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 92 93 10 3 2.77 45.79 +Sample_1084P DEL chr17:43584112-44159908 575.80 chr17 43872010 112454..112481 28 28 99 99 8 28 -3.64 0.16 +Sample_1084P DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 31 99 99 13 20 6.59 71.30 +Sample_1084P DUP chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 42 99 99 15 27 5.63 56.11 +Sample_1084P DUP chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 4 53 53 4 33 3.63 65.68 +Sample_1084P DEL chr19:55247287-55290114 42.83 chr19 55268700 128016..128023 8 6 99 99 14 6 -3.74 2.52 +Sample_1084P DEL chr21:45970318-46032871 62.55 chr21 46001594 134151..134159 9 10 73 73 4 10 -2.91 151.78 +Sample_1084P DEL chr22:50900988-50901367 0.38 chr22 50901177 138169..138170 2 43 46 46 20 7 -6.61 90.69 +Sample_1090F DEL chr1:14363-70008 55.65 chr1 42185 1..5 5 9 99 99 0 9 -5.60 16.08 +Sample_1090F DEL chr1:12851546-12921764 70.22 chr1 12886655 1602..1616 15 42 99 99 8 6 -3.86 39.16 +Sample_1090F DUP chr1:16914220-17090975 176.76 chr1 17002597 1953..1986 34 33 99 99 34 6 3.96 129.78 +Sample_1090F DEL chr1:17250820-17272900 22.08 chr1 17261860 1989..2002 14 13 99 99 3 3 -3.06 90.65 +Sample_1090F DEL chr2:130897464-130897669 0.21 chr2 130897566 20150..20151 2 81 86 86 20 5 -8.13 44.53 +Sample_1090F DUP chr2:132290437-132290642 0.21 chr2 132290539 20265..20266 2 52 52 52 12 10 6.87 138.40 +Sample_1090F DUP chr2:233272555-233274158 1.60 chr2 233273356 23911..23915 5 10 31 31 10 11 3.35 84.46 +Sample_1090F DEL chr3:195410623-195477983 67.36 chr3 195444303 32796..32803 8 6 99 99 9 7 -3.62 44.69 +Sample_1090F DUP chr5:140180783-140627799 447.02 chr5 140404291 40580..40611 32 8 98 99 6 11 2.41 85.60 +Sample_1090F DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 99 99 99 37 17 8.31 122.64 +Sample_1090F DEL chr7:74306509-74312628 6.12 chr7 74309568 50916..50919 4 3 96 98 4 3 -4.87 32.57 +Sample_1090F DEL chr8:11979496-11986804 7.31 chr8 11983150 55311..55312 2 30 39 39 18 6 -6.25 22.12 +Sample_1090F DUP chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 51 72 72 4 50 4.56 71.61 +Sample_1090F DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 4 99 99 4 20 4.96 89.98 +Sample_1090F DUP chr10:135267432-135381779 114.35 chr10 135324605 70960..70987 28 32 99 99 26 14 2.98 67.40 +Sample_1090F DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 73 99 99 87 21 5.68 75.35 +Sample_1090F DUP chr12:9447028-9453842 6.82 chr12 9450435 81112..81117 6 21 99 99 6 18 4.12 80.98 +Sample_1090F DEL chr12:11506008-11508524 2.52 chr12 11507266 81255..81258 4 14 61 61 50 14 -4.30 16.57 +Sample_1090F DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 44 99 99 52 27 7.32 73.84 +Sample_1090F DEL chr15:23299681-23443575 143.90 chr15 23371628 94425..94437 13 56 99 99 21 59 -5.04 15.28 +Sample_1090F DEL chr15:78207740-78212153 4.41 chr15 78209946 98003..98010 8 6 47 47 5 7 -2.82 110.25 +Sample_1090F DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 16 99 99 15 94 -6.27 11.99 +Sample_1090F DUP chr16:1280163-1291700 11.54 chr16 1285931 99713..99716 4 50 62 62 7 46 4.41 110.19 +Sample_1090F DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 37 98 99 10 30 -4.71 28.74 +Sample_1090F DUP chr17:18291533-18430160 138.63 chr17 18360846 109352..109365 14 4 98 99 6 6 3.47 58.13 +Sample_1090F DUP chr17:39182281-39406904 224.62 chr17 39294592 111309..111330 22 4 97 99 3 20 2.55 111.29 +Sample_1090F DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 9 50 50 17 9 -3.65 13.60 +Sample_1090F DUP chr19:40389652-40406060 16.41 chr19 40397856 124714..124720 7 34 99 99 21 31 3.94 75.45 +Sample_1090F DEL chr19:41355723-41386533 30.81 chr19 41371128 124962..124970 9 14 60 60 10 5 -2.81 19.95 +Sample_1090F DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 34 97 99 33 13 -6.30 57.46 +Sample_1090F DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 36 36 36 27 19 -6.23 48.29 +Sample_1090F DUP chr19:55344174-55361964 17.79 chr19 55353069 128030..128034 5 23 46 46 9 23 3.56 48.40 +Sample_1090F DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 27 10.00 92.49 +Sample_1090F DUP chr21:45949681-46020655 70.97 chr21 45985168 134147..134157 11 3 99 99 3 4 2.93 206.61 +Sample_1090F DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 35 99 99 32 34 7.83 126.43 +Sample_1090F DUP chr22:24373117-24384284 11.17 chr22 24378700 135356..135361 6 30 33 33 6 13 3.06 54.09 +Sample_1090F DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 20 42 42 24 18 -2.94 18.18 +Sample_1090M DEL chr1:14363-17742 3.38 chr1 16052 1..4 4 31 99 99 0 26 -5.41 29.83 +Sample_1090M DEL chr1:12851546-12976507 124.96 chr1 12914026 1602..1624 23 5 99 99 46 4 -6.61 16.51 +Sample_1090M DUP chr1:16913545-16972173 58.63 chr1 16942859 1952..1966 15 29 99 99 18 30 3.37 147.54 +Sample_1090M DEL chr1:17085561-17256842 171.28 chr1 17171201 1981..1992 12 23 99 99 5 13 -2.98 109.43 +Sample_1090M DUP chr1:144863318-144916749 53.43 chr1 144890033 8350..8374 25 12 99 99 28 5 2.73 67.33 +Sample_1090M DUP chr1:145293371-145326124 32.75 chr1 145309747 8398..8409 12 8 99 99 7 21 4.58 74.60 +Sample_1090M DUP chr1:145365287-145827103 461.82 chr1 145596195 8412..8544 133 19 99 99 21 19 3.31 59.23 +Sample_1090M DUP chr1:161575849-161643019 67.17 chr1 161609434 11056..11062 7 21 99 99 9 18 4.33 67.08 +Sample_1090M DUP chr2:233272977-233274158 1.18 chr2 233273567 23912..23915 4 14 30 30 14 16 3.80 54.74 +Sample_1090M DUP chr7:72469994-72476455 6.46 chr7 72473224 50673..50674 2 73 81 81 16 41 7.73 131.57 +Sample_1090M DEL chr7:102114808-102257205 142.40 chr7 102186006 52449..52456 8 10 99 99 10 11 -3.85 21.76 +Sample_1090M DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 20 73 73 29 20 4.52 85.61 +Sample_1090M DUP chr8:7170368-7752292 581.92 chr8 7461330 55173..55185 13 8 95 99 8 25 3.43 53.49 +Sample_1090M DUP chr8:12039614-12291623 252.01 chr8 12165618 55315..55323 9 11 99 99 6 11 4.33 85.22 +Sample_1090M DEL chr10:46965715-47088319 122.61 chr10 47027017 66734..66741 8 2 36 36 2 4 -2.70 95.25 +Sample_1090M DUP chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 27 99 99 3 12 5.85 105.13 +Sample_1090M DUP chr10:135269741-135381779 112.04 chr10 135325760 70961..70987 27 4 99 99 4 0 4.98 94.83 +Sample_1090M DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 78 99 99 74 27 4.39 80.39 +Sample_1090M DEL chr12:8376612-8385203 8.59 chr12 8380907 80973..80976 4 24 81 81 3 40 -4.71 62.70 +Sample_1090M DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 48 99 99 34 29 7.35 85.62 +Sample_1090M DEL chr15:23299681-23443575 143.90 chr15 23371628 94425..94437 13 18 69 69 10 6 -2.52 28.21 +Sample_1090M DEL chr15:30395935-30665348 269.41 chr15 30530641 94686..94691 6 11 65 65 11 25 -3.61 13.58 +Sample_1090M DEL chr15:75580599-75588146 7.55 chr15 75584372 97824..97829 6 7 88 88 9 6 -3.72 6.16 +Sample_1090M DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 34 48 48 11 44 -4.99 163.08 +Sample_1090M DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 16 98 99 16 78 -5.09 19.06 +Sample_1090M DEL chr16:109247-111694 2.45 chr16 110470 99280..99287 8 40 71 71 3 23 -3.05 89.06 +Sample_1090M DUP chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 3 99 99 4 7 3.62 78.98 +Sample_1090M DUP chr16:55844429-55860207 15.78 chr16 55852318 103455..103463 9 4 46 46 4 5 2.67 57.00 +Sample_1090M DUP chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 27 52 52 19 30 3.07 108.46 +Sample_1090M DUP chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 23 88 89 19 34 4.93 104.66 +Sample_1090M DEL chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 3 36 36 23 3 -3.72 62.74 +Sample_1090M DUP chr17:20355108-20405283 50.18 chr17 20380195 109567..109573 7 8 81 81 13 8 3.42 64.46 +Sample_1090M DUP chr17:60342069-60345600 3.53 chr17 60343834 113673..113676 4 6 33 33 6 13 3.84 108.47 +Sample_1090M DEL chr19:41355723-41386533 30.81 chr19 41371128 124962..124970 9 22 99 99 19 14 -3.21 21.41 +Sample_1090M DEL chr19:55247287-55361964 114.68 chr19 55304625 128016..128034 19 18 99 99 4 22 -2.89 11.33 +Sample_1090M DEL chr21:45970318-46067564 97.25 chr21 46018941 134151..134162 12 7 99 99 28 7 -2.82 249.88 +Sample_1090M DUP chr22:18769652-18778742 9.09 chr22 18774197 134659..134660 2 75 96 97 17 29 8.36 124.30 +Sample_1090M DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 5 99 99 4 24 3.90 52.13 +Sample_1090M DUP chrX:149009941-149014609 4.67 chrX 149012275 141607..141609 3 34 76 76 32 34 5.56 103.24 +Sample_1090P DEL chr1:14363-70008 55.65 chr1 42185 1..5 5 5 36 36 0 6 -3.35 13.64 +Sample_1090P DUP chr1:17046459-17086181 39.72 chr1 17066320 1977..1982 6 4 80 80 5 12 3.70 80.59 +Sample_1090P DUP chr1:17256619-17273486 16.87 chr1 17265052 1991..2003 13 13 99 99 13 10 2.98 76.99 +Sample_1090P DUP chr1:25611064-25629950 18.89 chr1 25620507 3041..3045 5 22 46 46 32 20 3.61 43.15 +Sample_1090P DUP chr2:131103591-131117219 13.63 chr2 131110405 20190..20196 7 14 31 31 21 14 2.84 54.02 +Sample_1090P DUP chr3:195690171-195712660 22.49 chr3 195701415 32841..32851 11 11 52 52 14 7 2.52 38.66 +Sample_1090P DEL chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 22 30 30 4 5 -5.87 43.31 +Sample_1090P DEL chr9:15909-179075 163.17 chr9 97492 59397..59399 3 6 42 42 41 6 -4.96 0.53 +Sample_1090P DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 98 99 99 90 39 6.00 47.47 +Sample_1090P DUP chr12:9447028-9447570 0.54 chr12 9447299 81112..81113 2 24 32 32 26 12 6.10 90.06 +Sample_1090P DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 78 98 99 32 25 8.78 105.46 +Sample_1090P DUP chr15:23438825-23444098 5.27 chr15 23441461 94435..94438 4 10 99 99 10 35 5.42 54.59 +Sample_1090P DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 9 37 37 3 31 -4.63 87.66 +Sample_1090P DUP chr16:1280163-1291700 11.54 chr16 1285931 99713..99716 4 31 33 33 28 20 3.88 66.00 +Sample_1090P DUP chr16:74401963-74452196 50.23 chr16 74427079 105290..105298 9 11 99 99 8 11 4.86 68.68 +Sample_1090P DUP chr17:18542488-18544666 2.18 chr17 18543577 109373..109374 2 6 30 30 21 5 5.98 101.45 +Sample_1090P DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 36 50 50 14 9 -5.03 0.53 +Sample_1090P DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 29 99 99 18 33 4.62 53.04 +Sample_1090P DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 22 99 99 13 30 -4.44 24.95 +Sample_1090P DUP chr21:45959068-46012386 53.32 chr21 45985727 134150..134156 7 47 99 99 12 7 5.23 170.24 +Sample_1090P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 66 99 99 40 35 6.19 72.97 +Sample_1090P DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 81 99 99 23 8 8.04 62.38 +Sample_1090P DEL chr22:21832286-21842312 10.03 chr22 21837299 135114..135119 6 4 90 90 2 18 -3.70 18.53 +Sample_1090P DUP chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 3 89 89 14 3 3.23 32.42 +Sample_1090P DUP chr22:24653965-24658575 4.61 chr22 24656270 135428..135430 3 29 42 42 15 4 4.81 116.60 +Sample_1090P DUP chr22:25041713-25045989 4.28 chr22 25043851 135494..135498 5 5 56 56 5 9 3.71 111.94 +Sample_1090P DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 66 99 99 36 51 -5.17 0.24 +Sample_1090P DUP chrX:7810303-7811346 1.04 chrX 7810824 138383..138384 2 17 47 47 17 5 6.42 61.01 +Sample_1273F DUP chr1:16385989-16388687 2.70 chr1 16387338 1859..1861 3 43 74 74 15 34 5.67 69.08 +Sample_1273F DUP chr1:16913545-17046652 133.11 chr1 16980098 1952..1977 26 23 99 99 4 22 7.24 150.73 +Sample_1273F DEL chr1:17087450-17263368 175.92 chr1 17175409 1985..1995 11 9 99 99 12 5 -3.22 96.57 +Sample_1273F DUP chr1:161520321-161601158 80.84 chr1 161560739 11052..11060 9 3 99 99 3 22 3.34 53.16 +Sample_1273F DUP chr2:96689057-96690085 1.03 chr2 96689571 18718..18720 3 12 57 57 13 5 5.20 101.92 +Sample_1273F DUP chr2:114341230-114353780 12.55 chr2 114347505 19699..19704 6 35 40 40 33 22 3.19 94.67 +Sample_1273F DEL chr3:48607708-48610489 2.78 chr3 48609098 27148..27160 13 8 44 44 5 6 -2.31 78.41 +Sample_1273F DUP chr3:195706615-195717150 10.54 chr3 195711882 32847..32852 6 5 30 30 8 5 2.96 67.14 +Sample_1273F DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 54 98 99 20 54 -6.03 51.81 +Sample_1273F DUP chr5:795720-833922 38.20 chr5 814821 37326..37331 6 8 98 99 37 8 6.70 76.96 +Sample_1273F DEL chr5:140220907-140238166 17.26 chr5 140229536 40585..40587 3 98 99 99 5 10 -9.05 8.97 +Sample_1273F DUP chr7:102180462-102257205 76.74 chr7 102218833 52451..52456 6 13 95 96 22 13 3.87 51.45 +Sample_1273F DEL chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 10 46 46 7 10 -2.97 20.15 +Sample_1273F DUP chr10:46963840-47088319 124.48 chr10 47026079 66733..66741 9 6 72 72 2 10 2.89 102.04 +Sample_1273F DUP chr10:124340382-124352111 11.73 chr10 124346246 70419..70425 7 11 99 99 10 26 5.26 92.89 +Sample_1273F DEL chr11:60970984-60978907 7.92 chr11 60974945 74466..74468 3 25 99 99 57 8 -6.59 7.37 +Sample_1273F DEL chr12:147946-149412 1.47 chr12 148679 79931..79932 2 31 60 60 11 48 -6.96 34.04 +Sample_1273F DEL chr12:9436253-9447570 11.32 chr12 9441911 81110..81113 4 25 96 98 25 8 -5.09 39.40 +Sample_1273F DUP chr12:9586691-9600768 14.08 chr12 9593729 81148..81151 4 5 53 53 4 13 4.08 79.86 +Sample_1273F DEL chr12:57345218-57351418 6.20 chr12 57348318 84118..84121 4 26 37 37 5 36 -3.81 23.48 +Sample_1273F DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 10 99 99 10 80 -5.40 16.85 +Sample_1273F DEL chr16:1279191-1292554 13.36 chr16 1285872 99711..99717 7 13 74 75 17 1 -3.34 49.59 +Sample_1273F DEL chr16:15122735-15123913 1.18 chr16 15123324 101212..101213 2 43 44 44 10 17 -6.55 77.61 +Sample_1273F DUP chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 4 99 99 20 4 4.21 70.80 +Sample_1273F DEL chr16:55806281-55808824 2.54 chr16 55807552 103453..103454 2 45 72 72 3 5 -7.37 0.47 +Sample_1273F DUP chr16:55844839-55867075 22.24 chr16 55855957 103456..103465 10 13 99 99 5 13 4.81 66.02 +Sample_1273F DUP chr16:74385938-74447574 61.64 chr16 74416756 105286..105297 12 43 99 99 33 33 3.37 84.72 +Sample_1273F DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 82 99 99 23 8 -8.91 58.45 +Sample_1273F DEL chr19:40368303-40396396 28.09 chr19 40382349 124706..124717 12 4 99 99 21 4 -2.93 33.08 +Sample_1273F DEL chr19:46627143-46627931 0.79 chr19 46627537 126007..126009 3 13 34 34 13 28 -4.56 0.22 +Sample_1273F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 47 99 99 23 8 -4.73 14.35 +Sample_1273F DUP chr22:42905034-42952594 47.56 chr22 42928814 137453..137461 9 10 99 99 9 13 4.38 71.04 +Sample_1273M DEL chr1:1634915-1639684 4.77 chr1 1637299 370..377 8 5 78 78 5 8 -3.08 19.03 +Sample_1273M DUP chr1:17085561-17086767 1.21 chr1 17086164 1981..1984 4 31 35 35 10 26 3.90 109.38 +Sample_1273M DUP chr1:150522298-150531942 9.64 chr1 150527120 8760..8773 14 7 33 33 8 2 2.19 57.30 +Sample_1273M DEL chr1:248524883-248637608 112.73 chr1 248581245 15083..15087 5 40 65 65 6 15 -3.89 54.89 +Sample_1273M DUP chr2:96689057-96689748 0.69 chr2 96689402 18718..18719 2 32 33 33 6 29 6.10 112.97 +Sample_1273M DEL chr2:233243681-233272727 29.05 chr2 233258204 23897..23911 15 22 47 47 9 19 -2.25 77.02 +Sample_1273M DEL chr2:233321609-233345185 23.58 chr2 233333397 23920..23929 10 2 96 99 5 2 -2.95 85.37 +Sample_1273M DUP chr3:48602216-48609604 7.39 chr3 48605910 27129..27155 27 18 58 58 13 20 1.97 84.94 +Sample_1273M DUP chr3:49712616-49719400 6.79 chr3 49716008 27576..27590 15 5 53 53 4 3 2.25 87.79 +Sample_1273M DUP chr3:49724380-49726196 1.82 chr3 49725288 27608..27613 6 5 77 77 11 2 3.61 171.79 +Sample_1273M DUP chr3:195690171-195717150 26.98 chr3 195703660 32841..32852 12 4 39 39 6 6 2.32 52.75 +Sample_1273M DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 41 68 68 10 41 -4.38 56.26 +Sample_1273M DUP chr5:139942248-139943500 1.25 chr5 139942874 40490..40492 3 20 79 79 3 2 5.61 124.34 +Sample_1273M DEL chr5:140165876-140627799 461.92 chr5 140396837 40578..40611 34 2 99 99 4 4 -2.47 56.22 +Sample_1273M DUP chr5:176729129-176730078 0.95 chr5 176729603 42271..42275 5 13 57 57 12 2 3.72 76.82 +Sample_1273M DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 52 99 99 23 32 4.80 104.37 +Sample_1273M DUP chr7:102119255-102257205 137.95 chr7 102188230 52450..52456 7 6 68 68 5 23 3.26 53.51 +Sample_1273M DUP chr7:128035185-128049538 14.35 chr7 128042361 53115..53124 10 13 53 53 11 19 2.60 68.19 +Sample_1273M DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 25 99 99 5 21 -6.36 10.69 +Sample_1273M DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 13 56 56 18 14 -4.25 17.16 +Sample_1273M DUP chr8:144635557-144663324 27.77 chr8 144649440 58819..58856 38 5 99 99 5 4 2.49 70.65 +Sample_1273M DUP chr8:145540996-145542583 1.59 chr8 145541789 59141..59150 10 4 41 41 2 12 2.51 127.55 +Sample_1273M DUP chr10:99123611-99153517 29.91 chr10 99138564 68811..68837 27 13 99 99 16 5 2.16 71.23 +Sample_1273M DUP chr10:135080856-135094940 14.09 chr10 135087898 70878..70898 21 3 76 76 16 2 2.14 68.59 +Sample_1273M DEL chr10:135368855-135439108 70.25 chr10 135403981 70976..70988 13 22 72 73 19 6 -2.52 59.02 +Sample_1273M DUP chr11:64010923-64024236 13.31 chr11 64017579 75183..75198 16 10 56 56 5 7 2.24 69.71 +Sample_1273M DUP chr11:64557361-64569955 12.60 chr11 64563658 75382..75408 27 6 99 99 3 6 2.17 95.68 +Sample_1273M DUP chr11:65338357-65392052 53.70 chr11 65365204 75742..75786 45 2 99 99 4 2 2.41 70.13 +Sample_1273M DUP chr11:65629682-65635527 5.85 chr11 65632604 75872..75884 13 5 64 64 2 12 2.43 86.78 +Sample_1273M DUP chr11:67044743-67068869 24.13 chr11 67056806 76300..76330 31 6 99 99 13 2 2.39 70.21 +Sample_1273M DUP chr14:24606194-24630547 24.35 chr14 24618370 90800..90847 48 7 99 99 20 6 1.90 61.42 +Sample_1273M DUP chr16:2012335-2027427 15.09 chr16 2019881 100001..100031 31 12 82 82 9 12 1.98 75.82 +Sample_1273M DUP chr16:3072626-3077074 4.45 chr16 3074850 100435..100448 14 8 99 99 6 15 2.70 110.30 +Sample_1273M DEL chr16:28607104-28619709 12.61 chr16 28613406 102275..102280 6 47 72 72 3 9 -3.55 46.17 +Sample_1273M DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 22 42 42 0 18 -4.80 11.51 +Sample_1273M DUP chr16:74442531-74452196 9.67 chr16 74447363 105291..105298 8 31 99 99 10 26 3.90 92.02 +Sample_1273M DUP chr17:4618308-4623594 5.29 chr17 4620951 107149..107159 11 16 39 39 12 9 2.44 56.70 +Sample_1273M DUP chr17:7734979-7754712 19.73 chr17 7744845 108065..108084 20 2 76 76 5 3 2.17 64.91 +Sample_1273M DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 41 99 99 6 40 3.56 67.40 +Sample_1273M DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 29 99 99 29 20 -5.04 12.50 +Sample_1273M DEL chr17:39155446-39412615 257.17 chr17 39284030 111307..111332 26 3 99 99 2 20 -4.41 67.46 +Sample_1273M DUP chr17:76121239-76134269 13.03 chr17 76127754 115331..115346 16 4 98 99 7 2 2.45 86.77 +Sample_1273M DUP chr17:79988195-79994639 6.45 chr17 79991417 116101..116111 11 5 99 99 5 13 2.94 85.16 +Sample_1273M DUP chr19:1073505-1079839 6.33 chr19 1076672 118425..118432 8 6 48 48 7 3 2.82 92.36 +Sample_1273M DUP chr19:1105657-1106458 0.80 chr19 1106057 118454..118456 3 10 56 56 4 7 5.15 83.26 +Sample_1273M DUP chr19:2097928-2099028 1.10 chr19 2098478 118741..118746 6 18 79 79 6 10 3.65 121.19 +Sample_1273M DUP chr19:6732998-6736722 3.73 chr19 6734860 119828..119835 8 21 47 47 11 3 2.82 68.37 +Sample_1273M DUP chr19:11460330-11470396 10.07 chr19 11465363 121086..121097 12 8 99 99 7 4 2.85 68.54 +Sample_1273M DUP chr19:13947101-13985622 38.52 chr19 13966361 121625..121628 4 7 99 99 5 6 5.30 138.15 +Sample_1273M DUP chr19:36230152-36237424 7.27 chr19 36233788 123763..123776 14 3 69 69 8 4 2.40 63.93 +Sample_1273M DEL chr19:40363864-40382826 18.96 chr19 40373345 124704..124712 9 2 99 99 2 6 -3.37 28.24 +Sample_1273M DUP chr19:43528843-43708403 179.56 chr19 43618623 125395..125407 13 31 99 99 13 3 3.23 59.16 +Sample_1273M DUP chr19:50364706-50387002 22.30 chr19 50375854 127018..127048 31 4 82 82 6 15 1.97 60.66 +Sample_1273M DEL chr19:55247287-55266508 19.22 chr19 55256897 128016..128021 6 11 96 97 11 6 -3.91 2.44 +Sample_1273M DUP chr19:59058743-59081894 23.15 chr19 59070318 128700..128731 32 17 90 91 5 4 1.98 69.01 +Sample_1273M DEL chr20:23966304-23969416 3.11 chr20 23967860 129830..129835 6 3 40 40 11 3 -3.05 111.82 +Sample_1273M DEL chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 38 99 99 16 4 -4.01 175.71 +Sample_1273M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 15 49 49 14 26 -4.87 36.90 +Sample_1273M DEL chr22:25041133-25055114 13.98 chr22 25048123 135493..135500 8 7 99 99 6 19 -5.50 71.01 +Sample_1273M DUP chr22:50956006-50969724 13.72 chr22 50962865 138213..138241 29 32 99 99 13 16 2.51 79.34 +Sample_1273M DUP chrX:140786599-140786655 0.06 chrX 140786627 141532..141532 1 30 30 30 30 29 10.00 127.53 +Sample_1273P DUP chr1:16918342-17046652 128.31 chr1 16982497 1955..1977 23 5 94 99 8 8 3.23 49.04 +Sample_1273P DEL chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 26 34 34 25 12 -4.47 35.16 +Sample_1273P DUP chr1:17256341-17256842 0.50 chr1 17256591 1990..1992 3 18 37 37 5 5 4.65 59.65 +Sample_1273P DUP chr1:155184845-155197325 12.48 chr1 155191085 9807..9817 11 52 99 99 6 12 7.30 48.46 +Sample_1273P DEL chr3:48613833-48614204 0.37 chr3 48614018 27175..27177 3 15 30 30 18 4 -4.49 28.77 +Sample_1273P DUP chr5:795720-825366 29.65 chr5 810543 37326..37330 5 22 42 42 22 13 3.54 30.06 +Sample_1273P DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 7 30 30 11 7 3.67 28.66 +Sample_1273P DEL chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 15 99 99 6 5 -4.33 2.48 +Sample_1273P DEL chr11:64564281-64565006 0.73 chr11 64564643 75391..75395 5 13 40 40 11 13 -3.51 36.96 +Sample_1273P DUP chr12:8376612-8391345 14.73 chr12 8383978 80973..80977 5 30 71 71 13 9 3.96 42.00 +Sample_1273P DUP chr14:74009754-74040294 30.54 chr14 74025024 92463..92466 4 7 81 81 21 5 4.78 25.39 +Sample_1273P DEL chr15:23299915-23444098 144.18 chr15 23372006 94426..94438 13 2 89 89 2 48 -2.59 9.61 +Sample_1273P DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 25 98 99 15 5 3.39 24.93 +Sample_1273P DEL chr17:39196811-39395255 198.44 chr17 39296033 111311..111329 19 17 99 99 15 15 -3.24 25.59 +Sample_1273P DEL chr21:46020671-46067564 46.89 chr21 46044117 134158..134162 5 21 54 54 3 18 -3.69 56.82 +Sample_1273P DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 3 50 50 5 3 -2.85 0.10 +Sample_1273P DEL chr22:42522502-42526883 4.38 chr22 42524692 137422..137430 9 9 99 99 16 9 -4.66 12.90 +Sample_1273P DEL chr22:50017826-50018329 0.50 chr22 50018077 137887..137888 2 23 42 42 42 6 -6.47 73.97 +Sample_1273P DUP chrX:152481522-152486116 4.59 chrX 152483819 141748..141750 3 38 51 51 34 31 4.93 27.31 +Sample_1295F DEL chr1:17249158-17264978 15.82 chr1 17257068 1988..1997 10 4 99 99 9 6 -3.45 67.90 +Sample_1295F DUP chr1:152184558-152196669 12.11 chr1 152190613 9162..9164 3 25 38 38 22 20 4.58 68.89 +Sample_1295F DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 15 99 99 54 4 -3.69 41.30 +Sample_1295F DUP chr3:2942369-3221390 279.02 chr3 3081879 24769..24788 20 5 39 39 3 7 2.07 28.03 +Sample_1295F DEL chr3:48613833-48619192 5.36 chr3 48616512 27175..27196 22 26 99 99 8 3 -2.44 62.25 +Sample_1295F DEL chr3:195451098-195475935 24.84 chr3 195463516 32798..32802 5 15 70 70 15 13 -3.98 34.15 +Sample_1295F DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 73 87 88 29 26 8.25 114.37 +Sample_1295F DEL chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 29 33 33 7 0 -4.51 20.76 +Sample_1295F DUP chr8:12286142-12287960 1.82 chr8 12287051 55321..55322 2 33 33 33 0 6 6.12 78.85 +Sample_1295F DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 99 99 99 24 20 10.00 172.03 +Sample_1295F DUP chr10:46965715-47000567 34.85 chr10 46983141 66734..66739 6 4 65 65 3 3 3.38 103.80 +Sample_1295F DUP chr10:47667455-47756732 89.28 chr10 47712093 66750..66767 18 3 99 99 2 34 2.79 54.79 +Sample_1295F DUP chr10:135267432-135439108 171.68 chr10 135353270 70960..70988 29 5 99 99 23 5 3.28 59.22 +Sample_1295F DEL chr11:64564106-64564852 0.75 chr11 64564479 75390..75394 5 31 64 64 7 19 -3.86 87.49 +Sample_1295F DEL chr12:11506008-11508524 2.52 chr12 11507266 81255..81258 4 5 94 95 4 5 -4.88 8.49 +Sample_1295F DUP chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 22 99 99 31 20 3.52 53.37 +Sample_1295F DEL chr15:78206559-78212648 6.09 chr15 78209603 98002..98012 11 6 99 99 6 5 -3.23 79.14 +Sample_1295F DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 42 58 58 38 44 -5.08 21.16 +Sample_1295F DUP chr16:18532087-18604038 71.95 chr16 18568062 101380..101392 13 22 77 77 22 32 2.51 45.45 +Sample_1295F DUP chr16:69988237-69996970 8.73 chr16 69992603 104858..104859 2 13 37 37 10 9 6.28 79.73 +Sample_1295F DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 57 80 80 28 32 -7.93 25.38 +Sample_1295F DEL chr19:54724398-54726002 1.60 chr19 54725200 127862..127864 3 13 48 48 48 13 -5.01 3.33 +Sample_1295F DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 35 99 99 18 7 3.82 45.62 +Sample_1295F DEL chr22:25044300-25055114 10.81 chr22 25049707 135496..135500 5 4 99 99 53 4 -5.14 73.01 +Sample_1295F DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 21 47 47 24 16 -3.00 13.97 +Sample_1295F DEL chr22:42538480-42538881 0.40 chr22 42538680 137436..137437 2 37 38 38 14 36 -6.34 90.52 +Sample_1295M DEL chr1:12907236-12946025 38.79 chr1 12926630 1610..1620 11 51 99 99 21 20 -5.29 34.24 +Sample_1295M DUP chr1:16952270-17090975 138.71 chr1 17021622 1964..1986 23 30 99 99 22 0 3.59 125.55 +Sample_1295M DEL chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 21 99 99 0 17 -4.95 55.23 +Sample_1295M DUP chr2:233271552-233274158 2.61 chr2 233272855 23907..23915 9 18 45 45 11 17 2.69 82.89 +Sample_1295M DEL chr3:48607567-48609971 2.40 chr3 48608769 27147..27157 11 29 91 92 7 28 -2.81 84.37 +Sample_1295M DEL chr3:195390957-195475935 84.98 chr3 195433446 32790..32802 13 3 98 99 3 9 -4.00 34.91 +Sample_1295M DEL chr5:140213969-140223351 9.38 chr5 140218660 40584..40585 2 44 44 44 33 23 -6.57 54.45 +Sample_1295M DEL chr7:74306509-74312628 6.12 chr7 74309568 50916..50919 4 5 99 99 10 5 -5.46 39.78 +Sample_1295M DEL chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 9 38 38 15 8 -3.21 26.21 +Sample_1295M DUP chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 21 47 47 15 14 4.17 78.01 +Sample_1295M DUP chr11:18955361-18956549 1.19 chr11 18955955 72915..72915 1 30 30 30 22 26 10.00 114.41 +Sample_1295M DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 28 99 99 28 32 4.21 68.37 +Sample_1295M DUP chr15:21134198-21134625 0.43 chr15 21134411 94353..94354 2 75 99 99 6 15 8.59 77.02 +Sample_1295M DEL chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 6 98 99 6 14 -5.18 112.97 +Sample_1295M DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 34 37 37 21 34 6.03 47.84 +Sample_1295M DEL chr16:1280163-1292554 12.39 chr16 1286358 99713..99717 5 12 57 57 15 12 -3.73 56.92 +Sample_1295M DEL chr16:21529232-21823932 294.70 chr16 21676582 101748..101776 29 2 99 99 12 3 -3.02 22.03 +Sample_1295M DUP chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 18 99 99 7 10 5.70 93.54 +Sample_1295M DEL chr16:70182367-70220796 38.43 chr16 70201581 104893..104898 6 4 69 69 4 28 -3.48 26.24 +Sample_1295M DEL chr16:74443448-74447574 4.13 chr16 74445511 105292..105297 6 5 98 99 3 8 -4.04 65.81 +Sample_1295M DEL chr17:27902648-27903149 0.50 chr17 27902898 110084..110086 3 29 34 34 11 6 -4.62 87.96 +Sample_1295M DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 34 99 99 29 24 6.55 70.83 +Sample_1295M DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 31 99 99 24 31 -5.20 18.59 +Sample_1295M DUP chr21:10910307-10990920 80.61 chr21 10950613 132955..132974 20 3 99 99 7 3 2.83 53.58 +Sample_1295M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 23 73 73 18 12 -5.47 39.20 +Sample_1295M DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 28 81 81 10 16 -3.34 17.35 +Sample_1295M DUP chr22:42537544-42538881 1.34 chr22 42538212 137434..137437 4 30 99 99 5 5 5.80 138.62 +Sample_1295P DUP chr1:12853352-12907262 53.91 chr1 12880307 1603..1610 8 5 38 38 5 6 2.75 73.70 +Sample_1295P DUP chr1:16907915-17085663 177.75 chr1 16996789 1950..1981 32 14 99 99 10 22 3.71 103.22 +Sample_1295P DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 6 99 99 0 5 -3.62 40.18 +Sample_1295P DUP chr3:2942369-3221390 279.02 chr3 3081879 24769..24788 20 12 86 86 4 36 2.25 29.86 +Sample_1295P DEL chr3:48610749-48612298 1.55 chr3 48611523 27162..27169 8 14 37 37 4 9 -2.72 90.94 +Sample_1295P DEL chr3:195451098-195475935 24.84 chr3 195463516 32798..32802 5 8 86 87 8 21 -4.23 33.65 +Sample_1295P DUP chr5:70307102-70388897 81.80 chr5 70347999 38767..38769 3 23 43 43 23 42 4.81 38.27 +Sample_1295P DUP chr5:140552243-140596993 44.75 chr5 140574618 40600..40607 8 4 93 95 4 2 3.24 72.08 +Sample_1295P DUP chr6:292101-348841 56.74 chr6 320471 42798..42804 7 13 52 52 17 4 3.09 58.88 +Sample_1295P DUP chr6:35748831-35765102 16.27 chr6 35756966 44051..44056 6 5 99 99 5 24 5.28 86.21 +Sample_1295P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 26 99 99 25 24 -5.35 11.88 +Sample_1295P DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 36 60 60 10 24 6.93 131.03 +Sample_1295P DUP chr10:46965715-47747132 781.42 chr10 47356423 66734..66765 32 3 99 99 3 20 2.53 61.23 +Sample_1295P DUP chr10:135267432-135439108 171.68 chr10 135353270 70960..70988 29 35 99 99 19 10 3.25 58.67 +Sample_1295P DUP chr11:71502785-71512276 9.49 chr11 71507530 76832..76835 4 22 99 99 31 23 5.09 123.03 +Sample_1295P DUP chr12:8376612-8385203 8.59 chr12 8380907 80973..80976 4 12 83 83 10 26 4.79 80.92 +Sample_1295P DEL chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 37 47 47 37 45 -3.64 10.05 +Sample_1295P DUP chr15:23299681-23300167 0.49 chr15 23299924 94425..94426 2 21 30 30 26 19 5.97 124.12 +Sample_1295P DUP chr15:75557658-75581824 24.17 chr15 75569741 97821..97825 5 9 73 73 6 23 4.00 44.45 +Sample_1295P DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 39 75 75 23 39 -5.69 107.83 +Sample_1295P DEL chr15:78212562-78213784 1.22 chr15 78213173 98012..98013 2 16 35 35 35 10 -6.23 51.34 +Sample_1295P DEL chr16:1278337-1291700 13.36 chr16 1285018 99710..99716 7 20 98 99 18 29 -3.68 33.82 +Sample_1295P DUP chr16:18532087-18604038 71.95 chr16 18568062 101380..101392 13 21 99 99 57 21 2.96 48.60 +Sample_1295P DUP chr16:28608318-28621357 13.04 chr16 28614837 102276..102282 7 5 59 59 7 9 3.12 61.84 +Sample_1295P DUP chr16:32162610-32890852 728.24 chr16 32526731 103095..103100 6 6 52 52 6 7 3.89 67.00 +Sample_1295P DUP chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 23 42 42 22 17 3.51 57.88 +Sample_1295P DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 54 98 99 20 36 5.31 69.04 +Sample_1295P DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 34 98 99 6 26 -5.12 11.81 +Sample_1295P DUP chr17:18528417-18544666 16.25 chr17 18536541 109368..109374 7 2 37 37 5 4 2.88 75.54 +Sample_1295P DEL chr19:54724398-54725251 0.85 chr19 54724824 127862..127863 2 29 52 52 51 4 -6.83 0.41 +Sample_1295P DUP chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 17 43 43 10 30 3.51 67.78 +Sample_1295P DUP chr19:55247287-55315381 68.09 chr19 55281334 128016..128025 10 3 70 70 4 19 2.76 33.79 +Sample_1295P DUP chr21:45953568-46022083 68.52 chr21 45987825 134149..134158 10 3 99 99 3 4 3.29 179.86 +Sample_1295P DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 18 99 99 12 10 -4.10 11.95 +Sample_1295P DUP chr22:22981593-22989508 7.92 chr22 22985550 135217..135221 5 10 71 71 32 7 3.97 103.05 +Sample_1295P DUP chr22:23651611-23654023 2.41 chr22 23652817 135259..135261 3 7 30 30 7 19 4.53 125.64 +Sample_1295P DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 8 99 99 8 3 3.63 43.42 +Sample_1295P DUP chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 40 40 40 29 14 6.43 172.54 +Sample_1326F DEL chr1:17084437-17086181 1.75 chr1 17085309 1979..1982 4 10 31 31 19 8 -3.81 56.62 +Sample_1326F DEL chr1:17250820-17275421 24.60 chr1 17263120 1989..2005 17 6 99 99 6 9 -2.66 39.83 +Sample_1326F DEL chr1:148930405-148933368 2.96 chr1 148931886 8608..8610 3 26 50 50 18 19 -4.88 46.58 +Sample_1326F DUP chr1:155184845-155206260 21.42 chr1 155195552 9807..9821 15 2 99 99 3 3 2.99 49.85 +Sample_1326F DUP chr2:220072978-220073208 0.23 chr2 220073093 23181..23182 2 33 56 56 14 3 6.95 99.19 +Sample_1326F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 19 64 64 23 15 -3.86 29.60 +Sample_1326F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 5 65 65 44 5 4.33 37.37 +Sample_1326F DUP chr8:144894987-144895896 0.91 chr8 144895441 58934..58938 5 13 99 99 7 13 5.29 83.98 +Sample_1326F DUP chr16:28607104-28608391 1.29 chr16 28607747 102275..102276 2 31 32 32 18 21 6.06 60.36 +Sample_1326F DUP chr16:55853447-55857595 4.15 chr16 55855521 103459..103462 4 12 40 40 5 10 3.96 42.15 +Sample_1326F DUP chr17:18392255-18398258 6.00 chr17 18395256 109358..109362 5 5 70 70 18 2 3.85 36.37 +Sample_1326F DUP chr17:48266738-48273560 6.82 chr17 48270149 112932..112956 25 3 52 52 4 6 1.98 54.58 +Sample_1326F DUP chr17:76128422-76129623 1.20 chr17 76129022 115337..115340 4 19 66 66 16 18 4.49 83.53 +Sample_1326F DUP chr19:13220364-13223825 3.46 chr19 13222094 121528..121533 6 13 48 48 7 4 3.25 49.27 +Sample_1326F DUP chr19:39911391-39911753 0.36 chr19 39911572 124597..124599 3 6 33 33 6 29 4.60 90.23 +Sample_1326F DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 34 43 43 42 12 -4.71 22.67 +Sample_1326F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 22 87 87 20 15 -3.41 6.92 +Sample_1326F DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 8 99 99 5 34 -4.66 47.71 +Sample_1326F DUP chr22:50960170-50960998 0.83 chr22 50960584 138221..138225 5 20 49 49 5 6 3.60 76.51 +Sample_1327M DEL chr1:16939833-17264232 324.40 chr1 17102032 1961..1996 36 4 99 99 4 6 -2.92 39.37 +Sample_1327M DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 28 99 99 10 11 -5.08 0.38 +Sample_1327M DUP chr1:36773371-36773564 0.19 chr1 36773467 4352..4353 2 33 39 39 34 29 6.38 112.65 +Sample_1327M DEL chr2:114346127-114358421 12.29 chr2 114352274 19700..19708 9 17 99 99 3 14 -3.73 23.77 +Sample_1327M DUP chr3:49849303-49849639 0.34 chr3 49849471 27701..27702 2 10 34 34 17 10 6.17 106.16 +Sample_1327M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 36 68 68 16 7 -3.91 29.84 +Sample_1327M DUP chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 7 60 60 3 11 4.29 35.72 +Sample_1327M DUP chr12:9447028-9458719 11.69 chr12 9452873 81112..81123 12 18 99 99 4 3 3.15 32.02 +Sample_1327M DUP chr14:24526376-24528398 2.02 chr14 24527387 90728..90734 7 5 34 34 17 5 2.87 65.17 +Sample_1327M DEL chr15:23308564-23444098 135.53 chr15 23376331 94427..94438 12 4 58 58 4 25 -2.47 4.16 +Sample_1327M DUP chr15:72957937-72958469 0.53 chr15 72958203 97498..97500 3 10 63 63 8 21 5.38 58.14 +Sample_1327M DUP chr16:3076680-3077074 0.40 chr16 3076877 100446..100448 3 15 32 32 4 23 4.54 119.17 +Sample_1327M DUP chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 7 81 81 6 19 3.66 43.26 +Sample_1327M DUP chr16:72097125-72111144 14.02 chr16 72104134 105210..105213 4 55 99 99 18 16 7.89 41.23 +Sample_1327M DEL chr16:74442531-74443539 1.01 chr16 74443035 105291..105292 2 40 42 42 4 15 -6.43 27.15 +Sample_1327M DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 20 81 81 13 19 -5.69 26.98 +Sample_1327M DUP chr17:39240459-39324424 83.97 chr17 39282441 111315..111322 8 18 77 77 25 16 3.15 72.54 +Sample_1327M DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 27 93 94 32 20 4.35 31.05 +Sample_1327M DEL chr19:40389652-40406060 16.41 chr19 40397856 124714..124720 7 16 99 99 18 6 -4.05 9.31 +Sample_1327M DEL chr22:24340596-24394849 54.25 chr22 24367722 135353..135362 10 3 99 99 6 4 -3.39 2.12 +Sample_1327M DUP chr22:25044300-25045989 1.69 chr22 25045144 135496..135498 3 7 63 63 7 27 5.36 97.06 +Sample_1327M DUP chr22:40805254-40805529 0.28 chr22 40805391 137136..137137 2 36 40 40 33 28 6.44 90.37 +Sample_1327M DEL chr22:42522853-42538640 15.79 chr22 42530746 137423..137436 14 3 45 45 3 11 -2.27 31.73 +Sample_1327P DEL chr1:14363-17742 3.38 chr1 16052 1..4 4 12 38 38 0 12 -3.85 10.97 +Sample_1327P DUP chr1:1289228-1289612 0.39 chr1 1289420 259..261 3 20 33 33 26 18 4.62 54.17 +Sample_1327P DEL chr1:17017713-17046652 28.94 chr1 17032182 1969..1977 9 26 99 99 2 16 -4.29 16.20 +Sample_1327P DUP chr1:17084437-17087597 3.16 chr1 17086017 1979..1985 7 37 99 99 16 23 3.71 70.08 +Sample_1327P DEL chr1:17256341-17273486 17.15 chr1 17264913 1990..2003 14 10 99 99 13 2 -2.73 39.76 +Sample_1327P DUP chr1:45798063-45798631 0.57 chr1 45798347 5460..5463 4 11 70 70 11 25 4.56 81.17 +Sample_1327P DUP chr3:48610454-48612154 1.70 chr3 48611304 27160..27168 9 11 99 99 5 9 3.40 73.23 +Sample_1327P DUP chr3:48619756-48620604 0.85 chr3 48620180 27198..27202 5 15 63 63 11 13 3.85 69.81 +Sample_1327P DUP chr7:127251999-127254611 2.61 chr7 127253305 53056..53060 5 15 31 31 15 30 3.38 45.05 +Sample_1327P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 21 99 99 20 21 -5.56 2.99 +Sample_1327P DUP chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 30 91 92 6 17 5.03 34.69 +Sample_1327P DUP chr9:116152685-116153903 1.22 chr9 116153294 62434..62437 4 11 43 43 12 4 4.00 57.13 +Sample_1327P DUP chr10:124345576-124353114 7.54 chr10 124349345 70421..70426 6 38 99 99 7 30 3.97 43.86 +Sample_1327P DEL chr15:22145703-22414393 268.69 chr15 22280048 94359..94366 8 5 34 34 17 5 -2.79 13.81 +Sample_1327P DEL chr16:2201570-2203046 1.48 chr16 2202308 100155..100159 5 14 31 31 14 13 -3.36 37.20 +Sample_1327P DUP chr16:28608318-28621357 13.04 chr16 28614837 102276..102282 7 4 85 99 6 7 4.02 39.03 +Sample_1327P DEL chr16:70162687-70177561 14.88 chr16 70170124 104882..104891 10 3 37 37 3 5 -2.48 9.74 +Sample_1327P DUP chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 33 34 34 25 24 6.13 55.06 +Sample_1327P DEL chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 13 99 99 13 10 -3.47 25.02 +Sample_1327P DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 10 98 99 8 40 -4.67 12.42 +Sample_1327P DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 13 79 79 13 2 3.09 30.99 +Sample_1327P DUP chr17:39315908-39395255 79.35 chr17 39355581 111321..111329 9 13 97 99 4 3 3.14 57.17 +Sample_1327P DUP chr19:39098504-39100314 1.81 chr19 39099409 124344..124347 4 17 38 38 16 26 3.95 51.54 +Sample_1327P DEL chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 3 73 73 3 6 -5.54 12.03 +Sample_1327P DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 99 99 99 6 18 10.00 79.75 +Sample_1327P DUP chr22:25045692-25045989 0.30 chr22 25045840 135497..135498 2 30 30 30 7 7 5.94 87.63 +Sample_1327P DUP chr22:42537544-42539582 2.04 chr22 42538563 137434..137438 5 8 91 99 1 11 5.62 56.80 +Sample_1350F DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 20 60 60 0 31 3.74 61.44 +Sample_1350F DEL chr1:12851546-12917002 65.46 chr1 12884274 1602..1613 12 17 99 99 43 16 -3.30 40.65 +Sample_1350F DUP chr1:16921087-16976914 55.83 chr1 16949000 1958..1968 11 11 99 99 6 37 3.62 155.19 +Sample_1350F DUP chr1:17085298-17090975 5.68 chr1 17088136 1980..1986 7 34 99 99 14 43 3.95 148.34 +Sample_1350F DEL chr1:25598981-25633220 34.24 chr1 25616100 3040..3046 7 8 99 99 7 16 -5.73 1.77 +Sample_1350F DUP chr2:233244474-233246077 1.60 chr2 233245275 23900..23904 5 17 99 99 16 9 4.50 128.74 +Sample_1350F DEL chr2:233272977-233321783 48.81 chr2 233297380 23912..23920 9 3 66 66 6 3 -2.86 37.62 +Sample_1350F DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 12 98 99 12 22 -2.72 39.37 +Sample_1350F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 17 56 56 15 8 -3.72 59.48 +Sample_1350F DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 27 99 99 18 27 -5.99 12.07 +Sample_1350F DUP chr7:143883677-144070377 186.70 chr7 143977027 54230..54236 7 23 99 99 19 31 5.67 70.11 +Sample_1350F DEL chr8:7320229-8090396 770.17 chr8 7705312 55182..55187 6 8 99 99 7 5 -4.84 29.80 +Sample_1350F DEL chr8:11979496-12287960 308.46 chr8 12133728 55311..55322 12 13 99 99 13 17 -4.50 26.52 +Sample_1350F DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 7 99 99 9 11 4.11 86.02 +Sample_1350F DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 41 72 72 43 3 -3.48 19.59 +Sample_1350F DUP chr16:1279191-1290729 11.54 chr16 1284960 99711..99714 4 5 42 42 23 5 4.02 73.09 +Sample_1350F DUP chr17:39382900-39389705 6.81 chr17 39386302 111326..111328 3 18 42 42 18 2 4.74 130.64 +Sample_1350F DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 12 75 75 12 22 4.05 52.17 +Sample_1350F DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 20 37 37 20 17 -3.46 43.77 +Sample_1350F DEL chr19:41355723-41387656 31.93 chr19 41371689 124962..124971 10 5 99 99 15 6 -3.55 16.80 +Sample_1350F DUP chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 7 45 45 7 23 4.92 95.56 +Sample_1350F DUP chr19:55247287-55267601 20.32 chr19 55257444 128016..128022 7 14 99 99 16 3 3.77 42.89 +Sample_1350F DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 42 99 99 16 17 5.77 68.36 +Sample_1350F DEL chr22:21828886-21842312 13.43 chr22 21835599 135112..135119 8 48 99 99 23 34 -3.93 28.84 +Sample_1350F DUP chr22:42905034-42914153 9.12 chr22 42909593 137453..137459 7 34 99 99 8 9 5.26 73.67 +Sample_1350F DEL chr22:42956192-42972615 16.42 chr22 42964403 137462..137469 8 4 59 99 4 30 -4.25 24.36 +Sample_1350M DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 3 34 34 0 4 3.29 72.83 +Sample_1350M DUP chr1:16918342-16976914 58.57 chr1 16947628 1955..1968 14 8 99 99 3 8 4.52 219.93 +Sample_1350M DUP chr1:17085298-17085663 0.37 chr1 17085480 1980..1981 2 22 34 34 34 13 6.18 263.55 +Sample_1350M DUP chr1:17086647-17275421 188.78 chr1 17181034 1984..2005 22 18 99 99 13 17 6.01 165.50 +Sample_1350M DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 63 99 99 9 17 -6.88 0.23 +Sample_1350M DEL chr1:32155968-32156827 0.86 chr1 32156397 3778..3780 3 23 34 34 4 9 -4.59 90.50 +Sample_1350M DUP chr1:104112026-104122147 10.12 chr1 104117086 7334..7341 8 29 99 99 9 5 3.59 72.15 +Sample_1350M DEL chr1:145293371-145299939 6.57 chr1 145296655 8398..8403 6 9 99 99 15 3 -4.40 36.30 +Sample_1350M DUP chr1:145325952-145365459 39.51 chr1 145345705 8409..8412 4 14 65 65 10 14 4.50 54.58 +Sample_1350M DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 14 99 99 28 3 4.28 126.93 +Sample_1350M DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 20 98 99 18 4 -3.88 50.44 +Sample_1350M DEL chr5:140220907-140238166 17.26 chr5 140229536 40585..40587 3 49 84 84 25 38 -5.90 60.19 +Sample_1350M DEL chr7:102119255-102180538 61.28 chr7 102149896 52450..52451 2 38 38 38 37 26 -6.48 35.33 +Sample_1350M DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 42 99 99 28 27 -7.62 17.76 +Sample_1350M DUP chr7:143883677-144075959 192.28 chr7 143979818 54230..54237 8 4 99 99 3 6 4.30 82.61 +Sample_1350M DEL chr8:7308087-8090396 782.31 chr8 7699241 55180..55187 8 8 53 53 24 4 -3.34 52.19 +Sample_1350M DEL chr8:12039614-12287960 248.35 chr8 12163787 55315..55322 8 34 99 99 6 3 -5.70 54.48 +Sample_1350M DEL chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 49 73 73 13 39 -7.43 101.81 +Sample_1350M DUP chr10:135267432-135381779 114.35 chr10 135324605 70960..70987 28 26 99 99 11 37 3.77 94.26 +Sample_1350M DEL chr12:87984-149412 61.43 chr12 118698 79925..79932 8 7 99 99 86 7 -4.07 42.89 +Sample_1350M DEL chr12:9578067-9580461 2.40 chr12 9579264 81140..81144 5 5 38 38 6 8 -3.45 66.24 +Sample_1350M DUP chr15:20771427-21134625 363.20 chr15 20953026 94346..94354 9 10 99 99 14 9 3.56 61.93 +Sample_1350M DEL chr15:25472256-25477557 5.30 chr15 25474906 94486..94489 4 5 59 59 5 13 -4.31 31.37 +Sample_1350M DEL chr16:1290678-1291700 1.02 chr16 1291189 99714..99716 3 33 45 45 14 4 -4.87 107.77 +Sample_1350M DEL chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 10 99 99 22 10 -3.64 70.94 +Sample_1350M DEL chr16:32163770-32896463 732.69 chr16 32530116 103096..103104 9 14 99 99 12 14 -3.53 56.40 +Sample_1350M DEL chr16:69996879-70211383 214.50 chr16 70104131 104859..104897 39 4 99 99 13 4 -3.00 31.28 +Sample_1350M DUP chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 50 52 52 8 22 6.82 156.66 +Sample_1350M DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 18 40 40 11 18 2.41 87.29 +Sample_1350M DEL chr17:18380099-18419084 38.99 chr17 18399591 109355..109364 10 11 98 99 12 4 -4.92 35.45 +Sample_1350M DUP chr17:39240459-39412615 172.16 chr17 39326537 111315..111332 18 8 90 90 25 8 2.33 164.93 +Sample_1350M DUP chr19:17443739-17450408 6.67 chr19 17447073 122450..122460 11 24 99 99 13 16 6.98 137.28 +Sample_1350M DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 56 99 99 34 23 7.79 96.67 +Sample_1350M DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 53 99 99 23 23 -6.20 29.09 +Sample_1350M DUP chr19:55247287-55250044 2.76 chr19 55248665 128016..128018 3 34 48 48 34 29 4.96 63.76 +Sample_1350M DUP chr19:55327893-55361964 34.07 chr19 55344928 128026..128034 9 30 99 99 4 23 3.15 51.21 +Sample_1350M DEL chr22:21828886-21842312 13.43 chr22 21835599 135112..135119 8 41 99 99 16 24 -4.74 33.41 +Sample_1350M DEL chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 7 99 99 4 16 -5.47 2.69 +Sample_1350M DUP chr22:42536566-42538881 2.32 chr22 42537723 137432..137437 6 5 52 52 15 5 3.31 155.01 +Sample_1350P DUP chr1:14363-17368 3.01 chr1 15865 1..3 3 26 58 58 0 3 5.19 74.00 +Sample_1350P DEL chr1:12851546-12891264 39.72 chr1 12871405 1602..1609 8 16 99 99 44 10 -3.87 45.31 +Sample_1350P DUP chr1:16913545-16972173 58.63 chr1 16942859 1952..1966 15 10 99 99 10 27 6.97 145.64 +Sample_1350P DEL chr1:17085971-17257892 171.92 chr1 17171931 1982..1994 13 3 79 84 10 3 -2.59 85.26 +Sample_1350P DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 48 99 99 22 21 -5.55 6.81 +Sample_1350P DUP chr1:25712202-25735360 23.16 chr1 25723781 3052..3057 6 14 99 99 42 14 4.17 64.50 +Sample_1350P DUP chr1:148930405-148933368 2.96 chr1 148931886 8608..8610 3 13 31 31 13 30 4.38 138.38 +Sample_1350P DEL chr3:195410623-195475935 65.31 chr3 195443279 32796..32802 7 12 98 99 12 11 -4.13 41.09 +Sample_1350P DUP chr3:195701268-195717150 15.88 chr3 195709209 32844..32852 9 16 82 82 4 16 2.94 59.78 +Sample_1350P DUP chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 16 40 40 26 16 3.88 78.09 +Sample_1350P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 34 99 99 30 23 -4.53 52.50 +Sample_1350P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 31 99 99 44 29 -6.12 9.88 +Sample_1350P DEL chr8:7305276-7752292 447.02 chr8 7528784 55179..55185 7 11 74 74 10 12 -3.54 16.06 +Sample_1350P DEL chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 15 99 99 50 15 -7.11 8.14 +Sample_1350P DUP chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 35 48 48 35 47 4.82 50.04 +Sample_1350P DUP chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 6 99 99 5 25 7.22 107.84 +Sample_1350P DEL chr12:11463269-11506936 43.67 chr12 11485102 81254..81256 3 14 31 31 5 7 -4.58 29.22 +Sample_1350P DEL chr15:20743914-20776700 32.79 chr15 20760307 94345..94350 6 14 80 80 44 4 -3.61 9.29 +Sample_1350P DUP chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 34 99 99 33 78 7.86 84.33 +Sample_1350P DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 13 47 47 14 15 3.62 47.78 +Sample_1350P DEL chr19:41355723-41386533 30.81 chr19 41371128 124962..124970 9 16 99 99 12 16 -3.35 15.66 +Sample_1350P DUP chr19:54868537-54875937 7.40 chr19 54872237 127921..127924 4 2 33 33 4 6 3.80 83.39 +Sample_1350P DUP chr21:46020497-46022083 1.59 chr21 46021290 134157..134158 2 8 34 34 8 8 6.05 208.42 +Sample_1350P DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 5 81 81 5 13 2.99 42.15 +Sample_1350P DUP chr22:42898755-42950048 51.29 chr22 42924401 137451..137460 10 26 99 99 11 7 5.94 73.47 +Sample_1350P DEL chr22:42956192-42972615 16.42 chr22 42964403 137462..137469 8 9 68 99 6 49 -4.44 19.87 +Sample_1372F DUP chr1:14363-17742 3.38 chr1 16052 1..4 4 8 39 39 0 38 3.85 52.54 +Sample_1372F DUP chr1:16918342-16955145 36.80 chr1 16936743 1955..1965 11 7 84 99 7 9 4.20 104.03 +Sample_1372F DUP chr1:17017713-17034222 16.51 chr1 17025967 1969..1975 7 13 57 57 27 9 3.14 62.16 +Sample_1372F DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 15 99 99 14 0 -4.47 80.55 +Sample_1372F DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 6 99 99 0 6 3.22 77.52 +Sample_1372F DEL chr1:22328149-22336350 8.20 chr1 22332249 2731..2737 7 6 99 99 16 6 -4.19 15.35 +Sample_1372F DUP chr1:36773118-36773810 0.69 chr1 36773464 4351..4354 4 10 65 65 4 10 4.43 116.53 +Sample_1372F DUP chr1:155184845-155197325 12.48 chr1 155191085 9807..9817 11 60 99 99 4 27 8.61 97.42 +Sample_1372F DEL chr2:132236881-132240504 3.62 chr2 132238692 20241..20243 3 8 43 43 3 18 -4.81 33.99 +Sample_1372F DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 27 35 35 25 27 -3.75 51.77 +Sample_1372F DEL chr5:840610-843839 3.23 chr5 842224 37333..37334 2 25 33 33 4 28 -6.04 40.84 +Sample_1372F DUP chr8:7308087-7752292 444.21 chr8 7530189 55180..55185 6 4 99 99 4 13 5.39 48.24 +Sample_1372F DUP chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 14 99 99 15 20 4.59 55.64 +Sample_1372F DEL chr10:46963840-47133836 170.00 chr10 47048838 66733..66742 10 16 99 99 4 13 -3.69 44.18 +Sample_1372F DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 11 99 99 12 14 4.38 59.58 +Sample_1372F DEL chr10:135369284-135439108 69.83 chr10 135404196 70977..70988 12 22 97 98 18 8 -2.77 44.75 +Sample_1372F DEL chr12:87984-149412 61.43 chr12 118698 79925..79932 8 35 78 78 48 24 -3.13 22.78 +Sample_1372F DEL chr12:9436253-9458353 22.10 chr12 9447303 81110..81122 13 8 99 99 6 13 -2.92 13.40 +Sample_1372F DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 65 73 73 33 25 7.71 101.46 +Sample_1372F DUP chr14:65216372-65246649 30.28 chr14 65231510 91966..91980 15 5 95 99 5 25 3.53 51.40 +Sample_1372F DUP chr15:22145375-22414393 269.02 chr15 22279884 94358..94366 9 40 99 99 3 39 5.43 53.51 +Sample_1372F DUP chr15:23443500-23444098 0.60 chr15 23443799 94437..94438 2 9 39 39 9 38 6.09 67.31 +Sample_1372F DEL chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 20 32 32 20 4 -3.35 21.92 +Sample_1372F DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 47 72 72 14 0 5.64 54.94 +Sample_1372F DEL chr16:28604573-28607255 2.68 chr16 28605914 102271..102275 5 7 45 45 5 6 -3.53 44.78 +Sample_1372F DEL chr16:74446671-74447574 0.90 chr16 74447122 105296..105297 2 70 88 88 2 7 -8.05 44.84 +Sample_1372F DEL chr17:18380099-18395859 15.76 chr17 18387979 109355..109360 6 3 56 56 11 3 -3.36 24.71 +Sample_1372F DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 76 99 99 15 20 -7.82 42.05 +Sample_1372F DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 9 99 99 8 21 -6.76 34.95 +Sample_1372F DEL chr19:55105662-55105941 0.28 chr19 55105801 127980..127981 2 53 76 76 18 2 -7.66 54.68 +Sample_1372F DUP chr19:55247438-55361964 114.53 chr19 55304701 128017..128034 18 4 95 96 2 8 2.33 26.57 +Sample_1372F DEL chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 14 99 99 4 7 -3.19 173.34 +Sample_1372F DEL chr22:23653884-23655208 1.32 chr22 23654546 135261..135262 2 66 74 74 10 11 -7.71 147.14 +Sample_1372F DUP chr22:42537544-42538881 1.34 chr22 42538212 137434..137437 4 71 99 99 26 6 7.19 107.47 +Sample_1372F DUP chr22:42898755-42952594 53.84 chr22 42925674 137451..137461 11 7 99 99 8 12 3.49 40.36 +Sample_1372F DUP chrX:47426038-47426831 0.79 chrX 47426434 139149..139152 4 8 39 39 22 5 3.95 74.29 +Sample_1372F DUP chrX:49103957-49105385 1.43 chrX 49104671 139532..139537 6 9 72 72 3 30 3.55 78.63 +Sample_1372M DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 6 41 41 0 6 3.44 23.42 +Sample_1372M DEL chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 28 99 99 10 1 -6.59 35.65 +Sample_1372M DUP chr1:17248445-17272900 24.46 chr1 17260672 1987..2002 16 9 81 99 0 23 2.95 41.48 +Sample_1372M DEL chr1:45798063-45798842 0.78 chr1 45798452 5460..5464 5 7 50 50 4 22 -3.63 39.81 +Sample_1372M DEL chr1:148930405-148933368 2.96 chr1 148931886 8608..8610 3 18 73 73 36 18 -5.47 30.02 +Sample_1372M DUP chr1:155184845-155197325 12.48 chr1 155191085 9807..9817 11 32 99 99 9 8 7.14 47.20 +Sample_1372M DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 32 99 99 25 11 4.71 42.31 +Sample_1372M DUP chr8:7320229-7721318 401.09 chr8 7520773 55182..55184 3 14 33 33 8 32 5.14 29.00 +Sample_1372M DUP chr8:11979496-12287960 308.46 chr8 12133728 55311..55322 12 27 99 99 24 3 3.97 29.17 +Sample_1372M DEL chr8:144894436-144896066 1.63 chr8 144895251 58933..58939 7 4 86 86 4 13 -3.44 31.01 +Sample_1372M DEL chr10:46965715-47088319 122.61 chr10 47027017 66734..66741 8 9 53 53 23 3 -2.89 22.37 +Sample_1372M DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 7 80 81 8 14 3.38 29.04 +Sample_1372M DUP chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 11 86 99 18 10 2.90 32.05 +Sample_1372M DEL chr11:1013899-1021277 7.38 chr11 1017588 71372..71377 6 6 31 31 20 6 -3.05 26.69 +Sample_1372M DEL chr11:3422989-3430378 7.39 chr11 3426683 71781..71788 8 4 47 47 4 38 -2.76 9.85 +Sample_1372M DUP chr15:23299681-23443575 143.90 chr15 23371628 94425..94437 13 31 99 99 13 32 3.32 19.83 +Sample_1372M DEL chr16:732768-733441 0.67 chr16 733104 99538..99541 4 34 57 57 12 3 -4.26 27.05 +Sample_1372M DUP chr16:74443448-74443776 0.33 chr16 74443612 105292..105293 2 10 36 36 3 9 6.12 46.42 +Sample_1372M DUP chr16:84215198-84218505 3.31 chr16 84216851 105732..105740 9 6 41 41 5 6 2.62 38.86 +Sample_1372M DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 49 77 78 36 24 -5.72 24.24 +Sample_1372M DEL chr19:49558098-49558997 0.90 chr19 49558547 126654..126655 2 48 73 73 7 21 -7.61 18.50 +Sample_1372M DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 36 99 99 9 19 -4.44 15.69 +Sample_1372M DEL chr19:55098477-55105743 7.27 chr19 55102110 127977..127980 4 13 58 58 13 10 -4.33 13.70 +Sample_1372M DEL chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 3 99 99 22 3 -2.83 74.42 +Sample_1372M DEL chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 10 99 99 8 4 -3.76 0.00 +Sample_1372M DEL chr22:24652721-24657004 4.28 chr22 24654862 135427..135429 3 61 87 87 19 59 -6.02 28.08 +Sample_1372M DEL chr22:25024048-25045989 21.94 chr22 25035018 135488..135498 11 5 75 75 5 18 -2.68 28.35 +Sample_1372M DUP chr22:31484685-31484955 0.27 chr22 31484820 136091..136092 2 30 30 30 25 24 6.04 96.11 +Sample_1372M DEL chr22:50900376-50901367 0.99 chr22 50900871 138167..138170 4 27 55 55 3 12 -4.22 43.47 +Sample_1372M DEL chr22:50959972-50961595 1.62 chr22 50960783 138220..138228 9 2 41 41 4 5 -2.62 36.69 +Sample_1372M DUP chrX:153033704-153036097 2.39 chrX 153034900 141849..141855 7 19 42 42 13 19 2.97 29.18 +Sample_1372P DEL chr1:16946340-16976914 30.57 chr1 16961627 1963..1968 6 7 61 61 8 6 -3.40 75.26 +Sample_1372P DEL chr1:248153569-248738058 584.49 chr1 248445813 15069..15089 21 8 99 99 6 9 -2.87 19.99 +Sample_1372P DUP chr3:48607567-48607767 0.20 chr3 48607667 27147..27148 2 43 43 43 24 42 6.55 91.47 +Sample_1372P DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 44 98 99 5 44 -6.96 23.05 +Sample_1372P DEL chr5:140165876-140537989 372.11 chr5 140351932 40578..40599 22 17 98 99 24 18 -3.33 30.08 +Sample_1372P DEL chr9:97062097-97088216 26.12 chr9 97075156 61593..61599 7 6 99 99 5 11 -3.84 31.23 +Sample_1372P DEL chr10:38736743-38741080 4.34 chr10 38738911 66571..66571 1 30 30 30 19 30 -9.96 114.75 +Sample_1372P DEL chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 4 99 99 4 19 -2.78 30.27 +Sample_1372P DEL chr11:123847403-123909708 62.31 chr11 123878555 79304..79308 5 15 99 99 4 42 -4.39 29.02 +Sample_1372P DEL chr12:11420109-11546911 126.80 chr12 11483510 81249..81259 11 14 70 70 18 13 -2.71 16.74 +Sample_1372P DUP chr14:65234381-65246649 12.27 chr14 65240515 91971..91980 10 31 99 99 3 7 3.86 40.29 +Sample_1372P DUP chr15:41859558-41871526 11.97 chr15 41865542 95375..95387 13 6 99 99 9 6 2.64 36.75 +Sample_1372P DUP chr16:732953-733598 0.65 chr16 733275 99539..99542 4 9 43 43 9 17 4.05 79.87 +Sample_1372P DEL chr17:39240459-39316983 76.53 chr17 39278721 111315..111321 7 10 98 99 7 5 -3.72 57.36 +Sample_1372P DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 9 40 40 8 8 3.14 41.06 +Sample_1372P DEL chr19:43680022-43709790 29.77 chr19 43694906 125402..125408 7 23 62 62 8 20 -3.14 12.42 +Sample_1372P DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 14 99 99 13 31 -5.04 24.64 +Sample_1372P DEL chr19:55085257-55147060 61.80 chr19 55116158 127971..128000 30 5 99 99 8 4 -2.07 33.54 +Sample_1372P DEL chr21:31720717-31986223 265.51 chr21 31853470 133151..133166 16 7 99 99 14 6 -2.67 17.51 +Sample_1372P DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 42 42 42 10 5 -4.66 23.55 +Sample_1372P DUP chr22:42537544-42538881 1.34 chr22 42538212 137434..137437 4 31 99 99 21 12 7.35 87.11 +Sample_1372P DUP chr22:42899205-42950048 50.84 chr22 42924626 137452..137460 9 8 99 99 6 3 3.54 35.27 +Sample_1628F DUP chr1:16913545-16972173 58.63 chr1 16942859 1952..1966 15 29 99 99 12 29 3.52 123.48 +Sample_1628F DEL chr1:155183617-155197325 13.71 chr1 155190471 9806..9817 12 13 99 99 21 14 -3.44 36.13 +Sample_1628F DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 20 50 50 13 18 3.64 91.35 +Sample_1628F DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 21 75 75 12 20 -4.55 21.76 +Sample_1628F DEL chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 13 99 99 35 13 -5.25 24.42 +Sample_1628F DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 25 31 31 25 14 -5.80 10.29 +Sample_1628F DUP chr9:117085303-117087432 2.13 chr9 117086367 62579..62583 5 3 99 99 3 4 7.76 88.10 +Sample_1628F DEL chr12:87984-208380 120.40 chr12 148182 79925..79933 9 15 70 70 51 15 -2.92 29.43 +Sample_1628F DUP chr15:23311642-23444098 132.46 chr15 23377870 94429..94438 10 37 99 99 4 36 3.27 46.47 +Sample_1628F DUP chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 6 30 30 6 4 4.45 178.94 +Sample_1628F DUP chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 4 81 81 4 81 4.65 62.58 +Sample_1628F DUP chr19:40392316-40398510 6.20 chr19 40395413 124716..124718 3 23 34 34 6 23 4.60 80.86 +Sample_1628F DUP chr19:54722230-54746186 23.96 chr19 54734208 127858..127867 10 3 83 99 3 12 3.02 64.87 +Sample_1628F DUP chr19:55247438-55361964 114.53 chr19 55304701 128017..128034 18 20 99 99 5 21 2.92 40.08 +Sample_1628F DUP chr22:25044121-25045989 1.87 chr22 25045055 135495..135498 4 29 44 44 10 29 4.06 179.50 +Sample_1628M DUP chr1:14970-17368 2.40 chr1 16169 2..3 2 34 34 34 15 11 6.20 43.42 +Sample_1628M DEL chr1:12851546-12958094 106.55 chr1 12904820 1602..1623 22 19 99 99 28 12 -3.90 13.72 +Sample_1628M DUP chr1:161560934-161578341 17.41 chr1 161569637 11054..11056 3 39 44 44 12 6 4.82 35.91 +Sample_1628M DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 66 99 99 4 38 -6.18 0.28 +Sample_1628M DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 33 85 85 50 33 -3.68 4.18 +Sample_1628M DUP chr17:18380099-18395859 15.76 chr17 18387979 109355..109360 6 24 71 71 17 5 3.57 30.64 +Sample_1628M DUP chr17:20354794-20407811 53.02 chr17 20381302 109566..109577 12 3 33 33 3 17 2.28 24.82 +Sample_1628M DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 5 54 54 5 12 3.03 18.76 +Sample_1628M DUP chr22:25041713-25049017 7.30 chr22 25045365 135494..135499 6 14 39 39 12 5 3.15 58.78 +Sample_1628M DEL chr22:50751875-50757432 5.56 chr22 50754653 138110..138124 15 4 57 57 3 5 -2.24 23.59 +Sample_1628P DUP chr1:12851546-12946025 94.48 chr1 12898785 1602..1620 19 3 75 75 4 14 2.22 57.97 +Sample_1628P DUP chr1:16935003-16975287 40.28 chr1 16955145 1960..1967 8 4 99 99 2 14 4.09 174.98 +Sample_1628P DUP chr1:17084437-17275019 190.58 chr1 17179728 1979..2004 26 36 99 99 14 3 5.04 141.21 +Sample_1628P DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 4 42 42 2 14 -3.12 28.44 +Sample_1628P DEL chr1:155183617-155206260 22.64 chr1 155194938 9806..9821 16 9 96 97 11 6 -2.44 61.38 +Sample_1628P DUP chr3:195395390-195475935 80.55 chr3 195435662 32792..32802 11 33 99 99 5 16 3.56 77.67 +Sample_1628P DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 39 98 99 17 39 -5.73 66.31 +Sample_1628P DEL chr5:837480-843839 6.36 chr5 840659 37332..37334 3 33 76 76 3 39 -5.64 43.99 +Sample_1628P DEL chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 28 53 53 22 29 -3.42 16.45 +Sample_1628P DEL chr8:11985367-12044342 58.98 chr8 12014854 55312..55317 6 8 57 57 22 8 -3.34 38.61 +Sample_1628P DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 81 99 99 81 28 -8.90 3.43 +Sample_1628P DEL chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 35 36 36 35 36 -4.52 1.04 +Sample_1628P DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 13 99 99 13 6 7.58 97.54 +Sample_1628P DEL chr10:135368348-135370660 2.31 chr10 135369504 70975..70980 6 5 99 99 5 26 -4.08 82.52 +Sample_1628P DEL chr15:23299681-23300167 0.49 chr15 23299924 94425..94426 2 73 75 75 19 0 -7.84 100.06 +Sample_1628P DEL chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 24 99 99 19 4 -4.80 19.33 +Sample_1628P DUP chr15:75580599-75581824 1.23 chr15 75581211 97824..97825 2 50 74 74 8 5 7.61 93.64 +Sample_1628P DEL chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 31 64 64 30 29 -5.38 23.87 +Sample_1628P DEL chr16:28606871-28621357 14.49 chr16 28614114 102274..102282 9 16 58 58 16 20 -2.79 54.18 +Sample_1628P DUP chr16:74394531-74444932 50.40 chr16 74419731 105289..105295 7 2 60 60 3 4 3.14 79.11 +Sample_1628P DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 35 97 99 23 9 -6.43 3.63 +Sample_1628P DEL chr17:43552466-44159908 607.44 chr17 43856187 112453..112481 29 6 99 99 3 19 -2.26 13.48 +Sample_1628P DUP chr19:14675878-14676475 0.60 chr19 14676176 121840..121842 3 34 35 35 35 7 4.66 126.93 +Sample_1628P DEL chr19:43586658-43709790 123.13 chr19 43648224 125400..125408 9 4 99 99 4 4 -4.30 26.11 +Sample_1628P DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 12 44 44 12 23 -4.87 77.66 +Sample_1628P DUP chr19:55247438-55361964 114.53 chr19 55304701 128017..128034 18 7 99 99 3 28 2.69 39.11 +Sample_1628P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 42 92 92 13 27 5.97 104.67 +Sample_1628P DUP chr22:22975944-22988991 13.05 chr22 22982467 135215..135219 5 15 89 89 11 4 4.23 124.32 +Sample_1628P DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 7 77 77 10 6 -3.13 22.30 +Sample_1628P DEL chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 29 54 54 5 4 -6.80 150.51 +Sample_1628P DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 26 52 52 34 8 -3.04 17.19 +Sample_1659F DEL chr1:14970-17742 2.77 chr1 16356 2..4 3 38 42 42 31 29 -4.73 10.46 +Sample_1659F DUP chr1:16952270-17090975 138.71 chr1 17021622 1964..1986 23 4 99 99 4 34 3.95 63.93 +Sample_1659F DEL chr1:17256619-17275421 18.80 chr1 17266020 1991..2005 15 5 99 99 6 5 -2.86 38.24 +Sample_1659F DEL chr2:130897464-130897944 0.48 chr2 130897704 20150..20152 3 6 31 31 25 6 -4.54 14.24 +Sample_1659F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 12 34 34 27 12 -3.39 30.83 +Sample_1659F DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 24 99 99 17 24 -5.41 4.74 +Sample_1659F DUP chr8:7215499-7220490 4.99 chr8 7217994 55174..55178 5 19 81 81 5 19 4.02 27.98 +Sample_1659F DUP chr8:11985367-12044342 58.98 chr8 12014854 55312..55317 6 6 99 99 28 6 4.89 46.63 +Sample_1659F DUP chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 17 41 41 17 41 4.65 27.78 +Sample_1659F DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 5 99 99 5 13 -4.54 15.53 +Sample_1659F DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 8 99 99 8 29 7.00 53.50 +Sample_1659F DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 5 99 99 5 97 -5.40 2.85 +Sample_1659F DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 5 69 69 5 23 -3.89 20.30 +Sample_1659F DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 39 99 99 11 27 3.48 125.03 +Sample_1659F DUP chr22:39425368-39440427 15.06 chr22 39432897 136964..136969 6 11 50 50 10 3 3.28 28.72 +Sample_1659M DEL chr1:16914220-16976914 62.70 chr1 16945567 1953..1968 16 3 80 82 3 14 -2.35 47.07 +Sample_1659M DEL chr1:17085298-17086181 0.88 chr1 17085739 1980..1982 3 27 33 33 8 7 -4.58 36.95 +Sample_1659M DUP chr1:17087450-17275019 187.57 chr1 17181234 1985..2004 20 7 99 99 7 4 3.00 55.09 +Sample_1659M DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 23 99 99 15 23 -5.69 5.72 +Sample_1659M DUP chr8:12039614-12287960 248.35 chr8 12163787 55315..55322 8 5 99 99 6 6 3.75 38.66 +Sample_1659M DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 22 99 99 26 5 7.70 43.63 +Sample_1659M DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 19 99 99 11 23 -4.70 11.97 +Sample_1659M DUP chr10:135267432-135381779 114.35 chr10 135324605 70960..70987 28 28 99 99 21 10 2.85 30.35 +Sample_1659M DEL chr12:87984-149412 61.43 chr12 118698 79925..79932 8 30 85 85 49 16 -3.19 12.30 +Sample_1659M DEL chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 18 99 99 9 19 -4.60 15.67 +Sample_1659M DUP chr16:55844839-55860207 15.37 chr16 55852523 103456..103463 8 6 86 86 6 7 3.20 27.31 +Sample_1659M DUP chr16:74401963-74452196 50.23 chr16 74427079 105290..105298 9 9 99 99 4 14 4.06 42.93 +Sample_1659M DUP chr19:17443739-17450408 6.67 chr19 17447073 122450..122460 11 40 99 99 14 5 4.10 40.76 +Sample_1659M DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 15 99 99 15 13 -5.09 18.76 +Sample_1659M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 36 81 81 14 33 -5.70 13.22 +Sample_1659M DEL chr22:22975944-22988991 13.05 chr22 22982467 135215..135219 5 8 46 46 7 17 -3.59 34.53 +Sample_1659M DEL chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 12 49 49 25 12 -2.69 11.31 +Sample_1659M DUP chr22:31483951-31486166 2.22 chr22 31485058 136089..136094 6 9 99 99 18 8 4.10 66.77 +Sample_1659M DUP chrX:47424651-47426530 1.88 chrX 47425590 139148..139151 4 7 43 43 7 9 4.04 48.80 +Sample_1659M DUP chrX:153697006-153697558 0.55 chrX 153697282 142180..142182 3 7 40 40 3 7 4.68 46.65 +Sample_1659P DUP chr1:16918342-17090975 172.63 chr1 17004658 1955..1986 32 11 99 99 9 7 3.62 48.50 +Sample_1659P DEL chr1:17249158-17272900 23.74 chr1 17261029 1988..2002 15 12 99 99 6 10 -2.95 27.53 +Sample_1659P DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 7 35 35 7 4 -2.71 16.68 +Sample_1659P DEL chr3:195395390-195475935 80.55 chr3 195435662 32792..32802 11 25 77 77 4 18 -2.72 12.87 +Sample_1659P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 28 92 93 42 22 -4.30 20.43 +Sample_1659P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 16 91 91 31 16 -4.86 3.15 +Sample_1659P DUP chr10:47658234-47756092 97.86 chr10 47707163 66745..66766 22 5 99 99 4 6 2.79 23.52 +Sample_1659P DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 19 41 41 32 12 3.12 22.19 +Sample_1659P DEL chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 28 38 38 26 16 -3.94 2.95 +Sample_1659P DUP chr15:22014420-22145802 131.38 chr15 22080111 94356..94359 4 28 34 34 7 34 3.86 27.47 +Sample_1659P DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 35 72 72 3 72 -5.38 3.20 +Sample_1659P DUP chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 4 60 60 4 18 5.22 41.81 +Sample_1659P DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 32 32 32 2 25 6.16 42.64 +Sample_1659P DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 34 99 99 27 10 2.75 87.45 +Sample_1659P DEL chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 10 99 99 3 3 -3.66 0.14 +Sample_1659P DUP chr22:42522502-42526883 4.38 chr22 42524692 137422..137430 9 19 99 99 28 13 4.81 43.90 +Sample_1732F DUP chr1:12907236-12946025 38.79 chr1 12926630 1610..1620 11 20 90 90 3 17 2.78 66.02 +Sample_1732F DUP chr1:16976569-17046652 70.08 chr1 17011610 1968..1977 10 3 82 99 3 14 3.92 88.71 +Sample_1732F DEL chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 14 79 91 35 2 -5.93 120.67 +Sample_1732F DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 5 79 99 0 25 2.93 108.19 +Sample_1732F DEL chr1:248756132-248802559 46.43 chr1 248779345 15090..15092 3 5 70 70 12 5 -5.55 1.99 +Sample_1732F DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 35 66 66 15 3 3.26 88.20 +Sample_1732F DUP chr3:12632297-12800808 168.51 chr3 12716552 25308..25325 18 16 99 99 15 18 3.63 56.94 +Sample_1732F DUP chr5:833888-843839 9.95 chr5 838863 37331..37334 4 10 78 78 10 12 4.70 86.35 +Sample_1732F DEL chr5:180375355-180429785 54.43 chr5 180402570 42756..42761 6 20 99 99 26 18 -5.26 0.13 +Sample_1732F DUP chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 81 99 99 10 8 5.98 77.51 +Sample_1732F DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 27 69 69 12 19 -4.49 21.27 +Sample_1732F DEL chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 43 99 99 4 19 -6.54 34.08 +Sample_1732F DUP chr12:87984-88392 0.41 chr12 88188 79925..79926 2 36 60 60 36 6 7.16 85.40 +Sample_1732F DEL chr15:20743914-21134625 390.71 chr15 20939269 94345..94354 10 4 44 44 32 3 -2.67 15.61 +Sample_1732F DUP chr15:23299681-23311838 12.16 chr15 23305759 94425..94429 5 27 61 61 21 26 3.83 88.67 +Sample_1732F DEL chr15:23438825-23444098 5.27 chr15 23441461 94435..94438 4 6 63 63 6 36 -4.27 20.46 +Sample_1732F DEL chr15:74362198-74364650 2.45 chr15 74363424 97607..97609 3 9 39 39 9 12 -4.75 14.20 +Sample_1732F DUP chr15:78207982-78209434 1.45 chr15 78208708 98004..98007 4 4 97 99 30 3 5.08 171.17 +Sample_1732F DEL chr15:102462345-102514309 51.97 chr15 102488327 99266..99268 3 19 49 49 18 46 -5.10 0.88 +Sample_1732F DEL chr16:14989371-15123913 134.54 chr16 15056642 101198..101213 16 27 55 55 11 12 -2.28 40.62 +Sample_1732F DUP chr16:28618272-28621357 3.09 chr16 28619814 102279..102282 4 17 40 40 9 5 3.92 91.49 +Sample_1732F DUP chr17:15638662-15640837 2.18 chr17 15639749 108934..108935 2 14 37 37 3 18 6.20 106.70 +Sample_1732F DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 33 98 99 12 32 -2.90 39.21 +Sample_1732F DEL chr17:18541934-18547740 5.81 chr17 18544837 109372..109377 6 3 71 71 3 21 -3.51 54.08 +Sample_1732F DEL chr17:20404829-20407811 2.98 chr17 20406320 109572..109577 6 16 98 99 22 17 -4.10 41.68 +Sample_1732F DUP chr17:39382900-39411837 28.94 chr17 39397368 111326..111331 6 8 84 84 8 4 3.73 137.26 +Sample_1732F DEL chr19:14876336-14876616 0.28 chr19 14876476 121892..121893 2 66 68 68 10 13 -7.47 49.31 +Sample_1732F DEL chr19:18707702-18710656 2.96 chr19 18709179 122823..122826 4 23 82 82 24 23 -4.75 27.45 +Sample_1732F DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 38 99 99 22 31 -5.43 39.24 +Sample_1732F DUP chr21:45970318-46074576 104.26 chr21 46022447 134151..134163 13 8 99 99 6 9 4.13 228.77 +Sample_1732F DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 31 99 99 22 47 -7.02 34.50 +Sample_1732F DUP chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 9 32 32 31 8 6.08 209.01 +Sample_1732F DUP chr22:25044121-25045989 1.87 chr22 25045055 135495..135498 4 32 67 67 23 13 4.50 187.98 +Sample_1732F DUP chr22:50900376-50901367 0.99 chr22 50900871 138167..138170 4 40 61 61 4 3 4.30 161.08 +Sample_1732F DUP chrX:149009941-149014609 4.67 chrX 149012275 141607..141609 3 49 66 66 34 36 5.31 59.31 +Sample_1732M DUP chr1:16914220-17046652 132.43 chr1 16980436 1953..1977 25 14 99 99 4 5 7.38 151.02 +Sample_1732M DEL chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 42 72 72 35 0 -5.45 143.03 +Sample_1732M DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 15 95 99 0 32 4.22 114.06 +Sample_1732M DEL chr1:145295423-145311154 15.73 chr1 145303288 8399..8407 9 11 87 87 6 8 -3.03 27.74 +Sample_1732M DUP chr3:195390495-195477983 87.49 chr3 195434239 32789..32803 15 6 98 99 35 5 5.59 81.00 +Sample_1732M DEL chr5:795720-825366 29.65 chr5 810543 37326..37330 5 35 98 99 19 35 -4.61 23.30 +Sample_1732M DUP chr7:102114808-102119381 4.57 chr7 102117094 52449..52450 2 11 30 30 27 11 5.82 84.20 +Sample_1732M DUP chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 43 66 66 12 47 3.58 49.44 +Sample_1732M DEL chr8:7153153-7170425 17.27 chr8 7161789 55171..55173 3 3 50 50 21 3 -4.89 1.12 +Sample_1732M DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 23 99 99 12 21 -5.93 13.67 +Sample_1732M DUP chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 20 59 59 14 20 5.16 67.70 +Sample_1732M DUP chr9:139612029-139658965 46.94 chr9 139635497 64897..64929 33 49 99 99 26 34 4.41 76.79 +Sample_1732M DEL chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 41 99 99 17 25 -7.79 5.98 +Sample_1732M DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 16 99 99 95 16 3.84 72.26 +Sample_1732M DUP chr12:9447028-9447570 0.54 chr12 9447299 81112..81113 2 7 30 30 19 7 5.99 142.04 +Sample_1732M DUP chr15:20771427-22414393 1642.97 chr15 21592910 94346..94366 21 47 99 99 4 42 5.31 64.82 +Sample_1732M DEL chr15:23438825-23444098 5.27 chr15 23441461 94435..94438 4 4 49 49 3 46 -3.97 17.00 +Sample_1732M DUP chr15:32450613-32455536 4.92 chr15 32453074 94747..94748 2 28 35 35 16 18 6.19 56.60 +Sample_1732M DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 17 36 36 9 17 -4.50 27.82 +Sample_1732M DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 42 76 76 17 14 5.67 76.74 +Sample_1732M DEL chr16:28618272-28621357 3.09 chr16 28619814 102279..102282 4 27 82 82 4 14 -4.72 58.74 +Sample_1732M DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 61 85 86 42 34 -5.84 14.23 +Sample_1732M DEL chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 56 58 58 29 13 -7.06 56.80 +Sample_1732M DUP chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 4 99 99 25 4 5.85 98.72 +Sample_1732M DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 25 95 98 15 43 -2.82 36.68 +Sample_1732M DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 33 33 18 5 2.36 56.19 +Sample_1732M DEL chr17:20404829-20407811 2.98 chr17 20406320 109572..109577 6 12 99 99 41 12 -6.35 37.48 +Sample_1732M DUP chr17:39382900-39411837 28.94 chr17 39397368 111326..111331 6 3 87 87 3 18 3.77 145.11 +Sample_1732M DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 75 99 99 7 26 -7.77 43.30 +Sample_1732M DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 29 10.00 101.48 +Sample_1732M DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 27 99 99 25 37 3.46 285.06 +Sample_1732M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 54 99 99 31 17 -7.01 31.74 +Sample_1732M DUP chr22:20383731-20394648 10.92 chr22 20389189 134919..134924 6 5 71 71 21 5 3.56 48.46 +Sample_1732M DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 6 99 99 5 8 3.88 53.16 +Sample_1732M DUP chr22:24656876-24661490 4.62 chr22 24659183 135429..135431 3 7 41 41 8 5 4.71 185.69 +Sample_1732M DUP chr22:25041713-25045989 4.28 chr22 25043851 135494..135498 5 42 99 99 6 5 5.00 193.39 +Sample_1732M DUP chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 10 40 40 10 35 4.90 54.92 +Sample_1732M DUP chrX:149009941-149014609 4.67 chrX 149012275 141607..141609 3 31 43 43 31 10 4.71 90.70 +Sample_1732P DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 24 58 58 0 46 3.72 54.31 +Sample_1732P DEL chr1:783034-812182 29.15 chr1 797608 9..15 7 17 43 43 18 21 -2.94 15.07 +Sample_1732P DUP chr1:12853352-12943231 89.88 chr1 12898291 1603..1619 17 14 99 99 19 11 2.98 66.62 +Sample_1732P DEL chr1:16952270-16972173 19.90 chr1 16962221 1964..1966 3 30 62 62 48 6 -5.35 124.21 +Sample_1732P DUP chr1:17084437-17275421 190.99 chr1 17179929 1979..2005 27 13 99 99 10 25 4.26 118.00 +Sample_1732P DEL chr1:36773371-36774076 0.71 chr1 36773723 4352..4355 4 7 63 63 29 7 -4.41 93.10 +Sample_1732P DUP chr1:155183617-155197325 13.71 chr1 155190471 9806..9817 12 36 99 99 36 18 8.07 109.03 +Sample_1732P DEL chr1:161565343-161601158 35.82 chr1 161583250 11055..11060 6 9 38 38 7 13 -3.10 17.99 +Sample_1732P DUP chr3:12775392-12800808 25.42 chr3 12788100 25315..25325 11 11 99 99 5 13 3.47 56.48 +Sample_1732P DEL chr3:48611695-48612298 0.60 chr3 48611996 27166..27169 4 35 52 52 7 15 -4.20 92.20 +Sample_1732P DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 3 90 91 3 30 -2.54 34.41 +Sample_1732P DUP chr5:819640-843839 24.20 chr5 831739 37329..37334 6 50 98 99 3 4 5.00 82.88 +Sample_1732P DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 36 37 37 6 14 3.42 86.63 +Sample_1732P DEL chr7:74193428-74310372 116.94 chr7 74251900 50909..50918 10 3 85 85 3 6 -2.90 41.69 +Sample_1732P DUP chr7:74573672-74988678 415.01 chr7 74781175 50925..50928 4 8 84 84 7 23 5.21 85.42 +Sample_1732P DUP chr7:102114808-102180538 65.73 chr7 102147673 52449..52451 3 48 51 51 14 25 5.17 67.09 +Sample_1732P DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 19 84 84 28 19 4.72 58.38 +Sample_1732P DEL chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 5 99 99 15 5 -3.02 29.53 +Sample_1732P DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 77 99 99 77 31 -8.56 2.07 +Sample_1732P DEL chr9:90744221-90747941 3.72 chr9 90746081 61295..61296 2 16 39 39 16 18 -6.39 41.72 +Sample_1732P DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 17 99 99 49 24 -3.52 14.48 +Sample_1732P DUP chr15:23299681-23330373 30.69 chr15 23315027 94425..94434 10 25 99 99 15 14 3.13 56.09 +Sample_1732P DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 19 41 41 6 19 -4.62 26.08 +Sample_1732P DUP chr16:1279567-1307063 27.50 chr16 1293315 99712..99720 9 9 99 99 10 12 3.45 91.48 +Sample_1732P DEL chr16:3075925-3077281 1.36 chr16 3076603 100441..100449 9 3 97 99 3 15 -3.14 97.22 +Sample_1732P DEL chr16:14988855-15123913 135.06 chr16 15056384 101197..101213 17 5 33 33 4 11 -2.12 32.61 +Sample_1732P DEL chr16:22480344-22492453 12.11 chr16 22486398 101864..101866 3 20 88 89 20 24 -5.93 10.24 +Sample_1732P DUP chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 41 99 99 12 21 3.48 72.97 +Sample_1732P DUP chr17:15602891-15642144 39.25 chr17 15622517 108928..108938 11 3 45 45 7 4 2.47 61.50 +Sample_1732P DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 10 71 71 4 10 -3.49 44.09 +Sample_1732P DUP chr17:39202798-39411837 209.04 chr17 39307317 111312..111331 20 11 99 99 2 22 2.50 105.49 +Sample_1732P DEL chr19:18707702-18710656 2.96 chr19 18709179 122823..122826 4 4 52 52 22 4 -4.14 26.40 +Sample_1732P DEL chr19:49519074-49520347 1.27 chr19 49519710 126636..126639 4 31 35 35 27 19 -3.88 70.99 +Sample_1732P DEL chr19:54784816-54803978 19.16 chr19 54794397 127894..127900 7 26 99 99 10 22 -5.06 32.30 +Sample_1732P DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 20 99 99 19 18 3.54 224.36 +Sample_1732P DEL chr22:18769652-18778742 9.09 chr22 18774197 134659..134660 2 39 69 69 13 21 -7.29 36.93 +Sample_1732P DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 53 99 99 34 10 -5.02 12.80 +Sample_1732P DUP chr22:42905034-42910310 5.28 chr22 42907672 137453..137457 5 32 99 99 32 8 5.48 74.00 +Sample_1732P DUP chr22:42914011-42952594 38.58 chr22 42933302 137459..137461 3 6 40 40 4 27 4.79 65.47 +Sample_1750F DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 23 85 85 0 23 4.14 34.39 +Sample_1750F DEL chr1:16918342-17086181 167.84 chr1 17002261 1955..1982 28 29 99 99 5 7 -4.16 36.27 +Sample_1750F DEL chr1:17090909-17275421 184.51 chr1 17183165 1986..2005 20 6 99 99 3 3 -4.77 25.52 +Sample_1750F DEL chr1:32126667-32127305 0.64 chr1 32126986 3739..3741 3 43 47 47 8 22 -4.96 18.31 +Sample_1750F DEL chr1:155183617-155185578 1.96 chr1 155184597 9806..9809 4 26 59 59 21 7 -4.34 30.33 +Sample_1750F DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 22 99 99 24 11 -3.14 14.05 +Sample_1750F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 6 69 69 18 6 -3.91 29.66 +Sample_1750F DEL chr8:12043861-12250923 207.06 chr8 12147392 55316..55320 5 17 43 43 6 17 -3.65 17.80 +Sample_1750F DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 24 46 46 24 20 -6.67 22.74 +Sample_1750F DUP chr15:41853325-41871526 18.20 chr15 41862425 95370..95387 18 8 99 99 18 8 3.08 34.97 +Sample_1750F DEL chr16:1290678-1292554 1.88 chr16 1291616 99714..99717 4 49 88 88 23 20 -4.87 25.92 +Sample_1750F DUP chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 18 84 84 12 18 3.12 33.75 +Sample_1750F DUP chr16:88688605-88706881 18.28 chr16 88697743 105982..105994 13 15 99 99 5 16 2.77 28.08 +Sample_1750F DUP chr17:15638244-15646830 8.59 chr17 15642537 108933..108944 12 35 98 99 13 6 4.60 42.73 +Sample_1750F DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 7 98 99 4 31 -4.14 13.66 +Sample_1750F DEL chr22:25041713-25045989 4.28 chr22 25043851 135494..135498 5 10 55 55 8 40 -3.71 56.27 +Sample_1750F DEL chr22:42538480-42538881 0.40 chr22 42538680 137436..137437 2 32 32 32 7 13 -6.08 47.43 +Sample_1750F DEL chrX:47930432-47986684 56.25 chrX 47958558 139204..139210 7 4 53 53 2 4 -2.99 14.11 +Sample_1750M DUP chr1:17084437-17087597 3.16 chr1 17086017 1979..1985 7 41 99 99 20 57 3.60 37.82 +Sample_1750M DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 57 80 80 18 28 7.95 41.47 +Sample_1750M DEL chr10:46965715-47000567 34.85 chr10 46983141 66734..66739 6 17 70 70 9 14 -3.50 17.61 +Sample_1750M DEL chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 3 99 99 5 4 -3.68 7.62 +Sample_1750M DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 25 51 51 29 22 -3.26 2.61 +Sample_1750M DEL chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 8 48 48 8 21 -3.61 9.56 +Sample_1750M DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 23 34 34 21 19 -6.20 12.95 +Sample_1750M DUP chr15:23438825-23444098 5.27 chr15 23441461 94435..94438 4 3 99 99 3 47 5.38 27.48 +Sample_1750M DEL chr15:72958123-72958469 0.35 chr15 72958296 97499..97500 2 40 64 64 7 6 -7.27 8.50 +Sample_1750M DEL chr16:3073848-3077074 3.23 chr16 3075461 100438..100448 11 7 68 68 7 9 -2.64 25.81 +Sample_1750M DEL chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 31 99 99 7 17 -4.11 11.29 +Sample_1750M DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 36 98 99 23 37 3.15 18.45 +Sample_1750M DEL chr17:79994260-79994889 0.63 chr17 79994574 116109..116112 4 14 39 39 14 8 -3.95 24.35 +Sample_1750M DEL chr22:42969268-42972615 3.35 chr22 42970941 137466..137469 4 50 58 58 16 35 -4.35 4.96 +Sample_1750P DEL chr1:16907915-17085530 177.62 chr1 16996722 1950..1980 31 4 99 99 10 2 -3.73 26.99 +Sample_1750P DEL chr1:17087450-17273486 186.04 chr1 17180468 1985..2003 19 9 99 99 19 8 -3.44 30.89 +Sample_1750P DUP chr2:240981231-240985489 4.26 chr2 240983360 24411..24412 2 20 31 31 15 20 5.83 62.29 +Sample_1750P DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 12 53 53 14 14 4.12 30.76 +Sample_1750P DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 44 57 57 51 12 -3.33 4.75 +Sample_1750P DEL chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 5 83 83 7 9 -2.77 10.33 +Sample_1750P DUP chr15:72958123-72958469 0.35 chr15 72958296 97499..97500 2 20 43 43 9 14 6.53 57.96 +Sample_1750P DEL chr15:78207740-78209434 1.70 chr15 78208587 98003..98007 5 6 49 49 7 11 -3.62 43.18 +Sample_1750P DUP chr16:70712155-70714928 2.77 chr16 70713541 105021..105026 6 7 48 48 6 17 3.25 32.99 +Sample_1750P DEL chr17:16705573-16736147 30.57 chr17 16720860 109046..109050 5 4 41 41 3 35 -3.39 12.22 +Sample_1750P DEL chr17:43502930-44159908 656.98 chr17 43831419 112451..112481 31 2 99 99 2 10 -2.39 0.05 +Sample_1750P DUP chr19:6730998-6731945 0.95 chr19 6731471 119821..119824 4 10 47 47 10 26 4.13 43.82 +Sample_1750P DEL chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 4 99 99 8 5 -3.64 0.22 +Sample_178F DUP chr1:887792-898297 10.51 chr1 893044 39..53 15 8 94 94 12 6 2.48 57.15 +Sample_178F DUP chr1:1225857-1226074 0.22 chr1 1225965 186..187 2 35 36 36 11 8 6.23 114.14 +Sample_178F DUP chr1:1289228-1289889 0.66 chr1 1289558 259..262 4 8 66 66 6 8 4.45 76.67 +Sample_178F DUP chr1:17017713-17086502 68.79 chr1 17052107 1969..1983 15 14 80 80 29 9 2.43 71.71 +Sample_178F DUP chr2:128391751-128407650 15.90 chr2 128399700 20043..20060 18 5 52 52 5 2 2.13 56.88 +Sample_178F DUP chr2:220356516-220364737 8.22 chr2 220360626 23359..23362 4 9 38 38 3 6 3.89 72.03 +Sample_178F DUP chr3:47033965-47043778 9.81 chr3 47038871 26813..26834 22 5 62 62 15 5 2.08 62.01 +Sample_178F DUP chr3:47047228-47048840 1.61 chr3 47048034 26845..26850 6 4 86 86 17 2 3.72 84.49 +Sample_178F DUP chr3:48602542-48623408 20.87 chr3 48612975 27130..27216 87 3 86 99 4 2 2.80 79.05 +Sample_178F DUP chr3:49713811-49720579 6.77 chr3 49717195 27580..27594 15 5 73 73 5 8 2.37 73.21 +Sample_178F DUP chr3:49849303-49850171 0.87 chr3 49849737 27701..27704 4 33 96 99 6 21 5.10 134.33 +Sample_178F DUP chr3:50251582-50253068 1.49 chr3 50252325 27821..27825 5 23 50 50 22 31 3.67 73.19 +Sample_178F DUP chr3:52536022-52539952 3.93 chr3 52537987 28381..28393 13 26 99 99 12 9 2.88 73.29 +Sample_178F DUP chr3:52550372-52557772 7.40 chr3 52554072 28416..28443 28 5 50 50 8 10 1.93 66.83 +Sample_178F DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 42 56 56 16 42 -4.15 37.65 +Sample_178F DUP chr5:795720-865696 69.98 chr5 830708 37326..37338 13 11 98 99 17 2 4.70 67.90 +Sample_178F DEL chr5:140165876-140627799 461.92 chr5 140396837 40578..40611 34 15 99 99 12 16 -2.67 37.62 +Sample_178F DUP chr7:100175287-100180082 4.80 chr7 100177684 52079..52086 8 4 33 33 32 4 2.68 65.09 +Sample_178F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 5 99 99 25 5 5.11 57.36 +Sample_178F DUP chr8:7308087-7308721 0.64 chr8 7308404 55180..55181 2 29 48 48 29 4 6.57 58.09 +Sample_178F DUP chr8:7721023-8092106 371.08 chr8 7906564 55184..55188 5 8 34 34 8 7 3.74 63.88 +Sample_178F DUP chr8:11979496-12044126 64.63 chr8 12011811 55311..55316 6 58 99 99 29 9 6.29 75.32 +Sample_178F DUP chr8:144894987-144899315 4.33 chr8 144897151 58934..58942 9 4 99 99 14 3 3.72 87.81 +Sample_178F DUP chr8:145540516-145542025 1.51 chr8 145541270 59138..59147 10 17 99 99 8 17 4.20 109.97 +Sample_178F DUP chr8:145649424-145657843 8.42 chr8 145653633 59236..59246 11 5 33 33 18 5 2.38 70.19 +Sample_178F DUP chr9:130565508-130569967 4.46 chr9 130567737 63360..63367 8 7 32 32 7 21 2.70 77.55 +Sample_178F DUP chr9:139840381-139849948 9.57 chr9 139845164 65021..65031 11 3 56 56 17 3 2.51 64.81 +Sample_178F DUP chr10:47667255-47756732 89.48 chr10 47711993 66749..66767 19 10 99 99 5 14 2.66 48.04 +Sample_178F DEL chr10:135368855-135439108 70.25 chr10 135403981 70976..70988 13 9 72 72 10 4 -2.51 42.39 +Sample_178F DUP chr11:1099764-1104417 4.65 chr11 1102090 71441..71450 10 20 76 76 8 5 2.74 69.08 +Sample_178F DUP chr11:1278470-1281958 3.49 chr11 1280214 71488..71496 9 13 42 42 14 12 2.66 69.12 +Sample_178F DUP chr11:1905510-1955238 49.73 chr11 1930374 71576..71594 19 6 55 55 8 8 2.14 57.99 +Sample_178F DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 36 49 49 17 21 -4.06 12.84 +Sample_178F DUP chr11:64022220-64023088 0.87 chr11 64022654 75191..75195 5 8 63 63 14 7 3.85 85.94 +Sample_178F DUP chr11:64563745-64570125 6.38 chr11 64566935 75388..75409 22 3 32 32 10 3 1.96 78.01 +Sample_178F DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 82 99 99 93 34 6.56 62.10 +Sample_178F DUP chr14:24525508-24530881 5.37 chr14 24528194 90725..90741 17 10 62 62 15 11 2.23 80.30 +Sample_178F DEL chr15:23299681-23300167 0.49 chr15 23299924 94425..94426 2 37 37 37 10 4 -6.15 53.77 +Sample_178F DUP chr15:25429453-25457180 27.73 chr15 25443316 94472..94479 8 5 31 31 5 19 2.68 46.69 +Sample_178F DUP chr15:40628961-40645468 16.51 chr15 40637214 95118..95127 10 7 44 44 6 7 2.55 61.59 +Sample_178F DUP chr16:708896-721781 12.89 chr16 715338 99491..99517 27 4 78 78 19 1 2.02 56.83 +Sample_178F DUP chr16:731438-776085 44.65 chr16 753761 99533..99577 45 6 99 99 4 18 2.34 60.28 +Sample_178F DUP chr16:2256359-2260052 3.69 chr16 2258205 100201..100210 10 9 65 65 13 3 2.71 74.30 +Sample_178F DUP chr16:3071556-3077281 5.73 chr16 3074418 100433..100449 17 29 99 99 16 4 3.06 87.21 +Sample_178F DEL chr16:18532087-18604038 71.95 chr16 18568062 101380..101392 13 8 99 99 9 16 -2.91 12.36 +Sample_178F DEL chr16:70162687-70195184 32.50 chr16 70178935 104882..104895 14 8 38 38 10 12 -2.24 17.77 +Sample_178F DUP chr16:72097125-72111144 14.02 chr16 72104134 105210..105213 4 55 99 99 23 20 6.61 52.54 +Sample_178F DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 6 48 48 5 6 -2.57 40.91 +Sample_178F DUP chr17:1374365-1375318 0.95 chr17 1374841 106498..106500 3 8 62 62 17 3 5.27 107.19 +Sample_178F DUP chr17:4442734-4446036 3.30 chr17 4444385 107083..107088 6 13 48 48 2 7 3.23 79.39 +Sample_178F DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 8 33 33 24 8 -4.45 37.69 +Sample_178F DEL chr17:18390961-18395859 4.90 chr17 18393410 109357..109360 4 10 57 57 12 13 -4.31 17.44 +Sample_178F DUP chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 23 97 99 12 9 6.42 58.01 +Sample_178F DEL chr17:20798990-20799453 0.46 chr17 20799221 109578..109578 1 30 30 30 26 29 -10.00 37.75 +Sample_178F DEL chr17:39155446-39526047 370.60 chr17 39340746 111307..111346 40 13 98 99 2 2 -2.96 41.71 +Sample_178F DUP chr17:39533923-39538636 4.71 chr17 39536279 111347..111353 7 4 64 99 0 32 4.50 58.58 +Sample_178F DUP chr17:48266103-48274031 7.93 chr17 48270067 112929..112959 31 10 99 99 13 14 2.29 78.46 +Sample_178F DUP chr17:56397892-56403782 5.89 chr17 56400837 113386..113394 9 8 45 45 5 9 2.67 62.69 +Sample_178F DUP chr17:73488555-73494404 5.85 chr17 73491479 114705..114718 14 17 99 99 12 2 2.63 64.27 +Sample_178F DUP chr17:76122358-76131090 8.73 chr17 76126724 115333..115343 11 18 54 54 19 12 2.54 75.63 +Sample_178F DUP chr17:79982154-79988114 5.96 chr17 79985134 116087..116100 14 13 99 99 14 7 2.66 65.23 +Sample_178F DUP chr17:80045561-80047260 1.70 chr17 80046410 116169..116175 7 4 40 40 8 4 2.92 74.37 +Sample_178F DEL chr19:15838834-15918936 80.10 chr19 15878885 122110..122113 4 42 47 47 18 26 -4.14 64.21 +Sample_178F DUP chr19:36219675-36228644 8.97 chr19 36224159 123745..123759 15 2 99 99 10 2 2.66 69.11 +Sample_178F DUP chr20:17596571-17608027 11.46 chr20 17602299 129555..129566 12 6 31 31 5 19 2.31 56.03 +Sample_178F DUP chr20:60962667-60971648 8.98 chr20 60967157 132486..132498 13 22 99 99 5 18 2.66 60.69 +Sample_178F DUP chr20:62192148-62193337 1.19 chr20 62192742 132741..132745 5 45 50 50 16 12 3.65 75.58 +Sample_178F DUP chr20:62318991-62319739 0.75 chr20 62319365 132785..132788 4 9 99 99 7 32 5.71 115.04 +Sample_178F DUP chr20:62697829-62703294 5.47 chr20 62700561 132908..132915 8 6 36 36 8 5 2.72 68.45 +Sample_178F DEL chr21:45959068-46131495 172.43 chr21 46045281 134150..134168 19 10 99 99 38 9 -5.07 115.98 +Sample_178F DUP chr21:47406440-47414143 7.70 chr21 47410291 134294..134310 17 6 40 40 4 9 2.12 63.21 +Sample_178F DUP chr21:47535923-47542072 6.15 chr21 47538997 134330..134341 12 3 85 85 22 3 2.64 69.15 +Sample_178F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 10 52 52 25 10 -3.02 11.26 +Sample_178F DUP chr22:50716864-50719618 2.75 chr22 50718241 138077..138084 8 26 38 38 7 4 2.73 67.62 +Sample_178F DUP chr22:50752636-50757432 4.80 chr22 50755034 138113..138124 12 10 70 70 10 26 2.52 76.07 +Sample_178F DUP chr22:50898963-50905139 6.18 chr22 50902051 138163..138181 19 8 99 99 6 11 2.49 76.67 +Sample_178M DUP chr1:17256619-17273486 16.87 chr1 17265052 1991..2003 13 42 89 88 3 26 2.58 43.05 +Sample_178M DEL chr2:130806641-130897669 91.03 chr2 130852155 20144..20151 8 4 58 58 4 2 -2.94 18.07 +Sample_178M DUP chr3:195392937-195475935 83.00 chr3 195434436 32791..32802 12 5 99 99 9 7 2.95 28.75 +Sample_178M DEL chr5:795720-837595 41.88 chr5 816657 37326..37332 7 12 84 84 18 12 -3.46 6.30 +Sample_178M DUP chr7:76140974-76179178 38.20 chr7 76160076 51081..51085 5 4 33 33 2 6 3.28 26.19 +Sample_178M DUP chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 32 99 99 57 24 6.27 35.30 +Sample_178M DEL chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 19 45 45 34 19 -4.81 6.20 +Sample_178M DEL chr8:145540850-145542731 1.88 chr8 145541790 59140..59151 12 11 88 88 7 11 -2.67 33.18 +Sample_178M DUP chr10:46965715-47088319 122.61 chr10 47027017 66734..66741 8 5 46 46 5 6 2.83 42.54 +Sample_178M DEL chr15:78206559-78208927 2.37 chr15 78207743 98002..98006 5 4 41 41 17 4 -3.49 38.42 +Sample_178M DEL chr16:57789257-57789978 0.72 chr16 57789617 103833..103835 3 4 51 51 4 26 -5.02 38.71 +Sample_178M DUP chr16:72097125-72111144 14.02 chr16 72104134 105210..105213 4 35 99 99 24 22 6.34 27.77 +Sample_178M DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 6 38 38 22 6 -4.57 20.30 +Sample_178M DEL chr17:39506672-39526047 19.38 chr17 39516359 111339..111346 8 54 99 99 41 5 -5.31 3.61 +Sample_178M DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 43 99 99 5 15 4.96 35.61 +Sample_178M DEL chr19:55105662-55107400 1.74 chr19 55106531 127980..127984 5 19 68 68 4 6 -3.89 23.81 +Sample_178M DEL chr19:55247287-55361964 114.68 chr19 55304625 128016..128034 19 4 99 99 4 23 -2.94 0.02 +Sample_178M DUP chr22:24373117-24394849 21.73 chr22 24383983 135356..135362 7 4 38 38 14 4 2.91 17.60 +Sample_178M DUP chrX:49099352-49099928 0.58 chrX 49099640 139528..139530 3 14 45 45 6 10 4.86 46.77 +Sample_178P DUP chr1:17084437-17256842 172.41 chr1 17170639 1979..1992 14 5 99 99 5 14 3.07 34.96 +Sample_178P DEL chr1:32155968-32158243 2.28 chr1 32157105 3778..3785 8 5 36 36 6 11 -2.73 16.03 +Sample_178P DUP chr1:45798063-45798506 0.44 chr1 45798284 5460..5462 3 20 50 50 18 20 5.05 47.11 +Sample_178P DEL chr3:48608676-48609854 1.18 chr3 48609265 27153..27156 4 9 79 79 6 25 -4.71 14.87 +Sample_178P DEL chr3:195390495-195447954 57.46 chr3 195419224 32789..32797 9 13 85 86 12 12 -3.05 3.24 +Sample_178P DUP chr5:795720-843839 48.12 chr5 819779 37326..37334 9 71 98 99 16 3 5.67 31.53 +Sample_178P DUP chr10:46965715-47088319 122.61 chr10 47027017 66734..66741 8 7 56 56 6 6 2.93 27.70 +Sample_178P DEL chr15:78207982-78208271 0.29 chr15 78208126 98004..98005 2 50 51 51 11 22 -6.83 37.58 +Sample_178P DEL chr16:3076680-3077074 0.40 chr16 3076877 100446..100448 3 7 36 36 3 7 -4.61 47.72 +Sample_178P DEL chr19:2098286-2098449 0.16 chr19 2098367 118743..118744 2 19 40 40 10 19 -6.40 19.41 +Sample_178P DEL chr22:31484499-31484955 0.46 chr22 31484727 136090..136092 3 24 48 48 4 26 -4.95 35.21 +Sample_1802F DEL chr1:16918342-16976914 58.57 chr1 16947628 1955..1968 14 21 99 99 24 23 -4.27 48.83 +Sample_1802F DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 45 99 99 12 29 -5.05 46.72 +Sample_1802F DUP chr1:17250820-17257089 6.27 chr1 17253954 1989..1993 5 23 34 34 16 3 3.38 73.24 +Sample_1802F DEL chr7:102119255-102257205 137.95 chr7 102188230 52450..52456 7 3 56 56 4 7 -3.11 6.31 +Sample_1802F DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 38 53 53 11 13 -4.23 12.55 +Sample_1802F DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 64 99 99 33 13 -5.82 0.44 +Sample_1802F DEL chr12:9447413-9458719 11.31 chr12 9453066 81113..81123 11 4 39 39 4 39 -2.43 11.03 +Sample_1802F DUP chr16:1279567-1291700 12.13 chr16 1285633 99712..99716 5 17 40 40 17 40 3.52 52.41 +Sample_1802F DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 6 42 42 17 6 -3.50 19.12 +Sample_1802F DUP chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 2 99 99 4 4 4.10 50.81 +Sample_1802F DUP chr17:18390961-18398258 7.30 chr17 18394609 109357..109362 6 3 55 55 5 3 3.28 32.94 +Sample_1802F DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 29 37 37 5 8 -4.67 1.69 +Sample_1802F DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 12 99 99 7 19 4.09 40.15 +Sample_1802F DEL chr19:43349168-43530631 181.46 chr19 43439899 125377..125396 20 32 99 99 4 23 -3.48 9.51 +Sample_1802F DEL chr19:55239077-55266508 27.43 chr19 55252792 128015..128021 7 4 75 75 4 8 -3.32 1.38 +Sample_1802F DUP chr20:44577809-44578708 0.90 chr20 44578258 131591..131595 5 7 75 75 5 29 4.02 72.76 +Sample_1802F DUP chr21:37572629-37618975 46.35 chr21 37595802 133442..133455 14 19 60 60 10 17 2.38 24.23 +Sample_1802F DUP chr21:46031996-46086844 54.85 chr21 46059420 134159..134165 7 3 99 99 10 3 3.66 109.47 +Sample_1802M DUP chr1:17250820-17264978 14.16 chr1 17257899 1989..1997 9 8 47 47 10 6 2.69 41.47 +Sample_1802M DEL chr2:114346127-114355215 9.09 chr2 114350671 19700..19705 6 33 57 57 31 6 -3.40 11.87 +Sample_1802M DEL chr2:241631491-241657585 26.09 chr2 241644538 24473..24475 3 5 30 30 23 5 -4.55 10.98 +Sample_1802M DUP chr3:48610607-48610990 0.38 chr3 48610798 27161..27163 3 56 97 99 3 15 6.25 60.67 +Sample_1802M DUP chr7:141759272-141765268 6.00 chr7 141762270 54004..54010 7 48 99 99 6 19 3.81 20.79 +Sample_1802M DUP chr8:8090316-8096446 6.13 chr8 8093381 55187..55192 6 41 99 99 22 38 6.18 54.01 +Sample_1802M DEL chr8:145541447-145542583 1.14 chr8 145542015 59144..59150 7 5 49 49 5 6 -3.02 31.64 +Sample_1802M DEL chr12:8376612-8391345 14.73 chr12 8383978 80973..80977 5 6 78 78 5 27 -4.07 17.75 +Sample_1802M DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 9 43 43 4 21 -4.82 47.39 +Sample_1802M DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 7 61 61 8 13 -3.79 9.50 +Sample_1802M DUP chr16:74387675-74447574 59.90 chr16 74417624 105288..105297 10 3 93 94 3 12 2.95 29.27 +Sample_1802M DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 7 98 99 16 5 3.86 23.77 +Sample_1802M DUP chr17:39525655-39551320 25.67 chr17 39538487 111346..111355 10 3 99 99 3 11 3.15 26.08 +Sample_1802M DUP chr19:36053337-36104802 51.47 chr19 36079069 123673..123679 7 5 34 34 5 23 2.90 30.87 +Sample_1802M DUP chr19:59081711-59081894 0.18 chr19 59081802 128730..128731 2 56 56 56 30 29 7.06 74.79 +Sample_1802M DUP chr22:18769652-18778742 9.09 chr22 18774197 134659..134660 2 19 39 39 19 14 6.12 38.69 +Sample_1802P DEL chr1:16913545-16976914 63.37 chr1 16945229 1952..1968 17 15 99 99 11 15 -4.28 27.02 +Sample_1802P DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 22 99 99 3 59 -5.41 23.68 +Sample_1802P DUP chr9:117085303-117087432 2.13 chr9 117086367 62579..62583 5 22 99 99 22 3 8.11 40.14 +Sample_1802P DUP chr10:89120238-89124960 4.72 chr10 89122599 68298..68299 2 24 45 45 43 11 6.59 22.91 +Sample_1802P DUP chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 20 99 99 7 28 3.18 30.95 +Sample_1802P DUP chr12:87984-149412 61.43 chr12 118698 79925..79932 8 50 99 99 54 8 3.58 24.14 +Sample_1802P DEL chr15:22145703-22414393 268.69 chr15 22280048 94359..94366 8 4 81 81 16 4 -3.23 7.50 +Sample_1802P DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 9 35 35 8 25 -3.37 13.48 +Sample_1802P DEL chr19:58965063-58969199 4.14 chr19 58967131 128671..128673 3 28 32 32 3 8 -4.47 12.35 +Sample_1802P DUP chr21:45970318-46012386 42.07 chr21 45991352 134151..134156 6 20 38 38 14 24 3.16 84.77 +Sample_1802P DUP chr22:21828886-21834291 5.41 chr22 21831588 135112..135116 5 14 36 36 13 13 3.44 26.18 +Sample_1802P DEL chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 12 99 99 7 2 -3.86 0.00 +Sample_1802P DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 3 37 37 3 25 -3.10 32.84 +Sample_1848F DUP chr1:14970-17742 2.77 chr1 16356 2..4 3 70 99 99 40 57 6.94 108.05 +Sample_1848F DUP chr1:1635478-1677431 41.95 chr1 1656454 372..382 11 6 84 84 5 27 2.75 61.90 +Sample_1848F DUP chr1:16895568-16976914 81.35 chr1 16936241 1945..1968 24 18 99 99 8 15 4.20 157.81 +Sample_1848F DEL chr1:17085561-17086502 0.94 chr1 17086031 1981..1983 3 5 48 48 26 5 -4.97 90.28 +Sample_1848F DEL chr1:148930405-149399229 468.82 chr1 149164817 8608..8613 6 4 39 39 4 38 -3.41 96.02 +Sample_1848F DUP chr1:161559352-161601158 41.81 chr1 161580255 11053..11060 8 18 99 99 5 31 4.53 72.67 +Sample_1848F DEL chr2:96697781-96698167 0.39 chr2 96697974 18726..18727 2 28 51 51 11 25 -6.61 0.00 +Sample_1848F DUP chr3:49723746-49724235 0.49 chr3 49723990 27606..27607 2 23 46 46 9 16 6.64 225.57 +Sample_1848F DEL chr5:825279-843839 18.56 chr5 834559 37330..37334 5 2 98 99 2 5 -4.46 57.24 +Sample_1848F DUP chr5:180375355-180430876 55.52 chr5 180403115 42756..42762 7 6 62 62 20 6 3.22 50.78 +Sample_1848F DUP chr6:304628-348841 44.21 chr6 326734 42799..42804 6 6 78 78 6 13 3.68 102.63 +Sample_1848F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 16 99 99 25 16 5.25 98.00 +Sample_1848F DEL chr8:11979496-12044126 64.63 chr8 12011811 55311..55316 6 21 99 99 20 5 -4.75 52.82 +Sample_1848F DUP chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 10 64 64 5 0 5.32 113.09 +Sample_1848F DEL chr8:12286142-12287960 1.82 chr8 12287051 55321..55322 2 62 75 75 0 11 -7.78 37.75 +Sample_1848F DEL chr10:47680349-47756092 75.74 chr10 47718220 66759..66766 8 42 62 62 8 46 -3.03 73.55 +Sample_1848F DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 99 99 99 26 24 -8.72 0.79 +Sample_1848F DEL chr11:60970984-60971741 0.76 chr11 60971362 74466..74467 2 65 88 88 4 4 -8.06 23.65 +Sample_1848F DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 26 95 96 13 36 4.35 123.32 +Sample_1848F DUP chr14:19558991-20404761 845.77 chr14 19981876 90040..90047 8 21 99 99 20 17 4.40 69.52 +Sample_1848F DUP chr15:23311307-23444098 132.79 chr15 23377702 94428..94438 11 20 99 99 4 41 3.71 63.84 +Sample_1848F DUP chr15:41853325-41871526 18.20 chr15 41862425 95370..95387 18 10 96 98 16 11 2.32 80.71 +Sample_1848F DUP chr15:74364559-74368131 3.57 chr15 74366345 97609..97610 2 21 47 47 5 19 6.43 109.23 +Sample_1848F DEL chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 14 99 99 13 28 -5.28 155.46 +Sample_1848F DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 4 76 76 4 15 -3.59 65.34 +Sample_1848F DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 30 99 99 30 18 -5.24 31.38 +Sample_1848F DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 57 77 77 34 21 -5.61 18.28 +Sample_1848F DUP chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 8 97 99 22 8 4.45 122.43 +Sample_1848F DUP chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 15 38 38 12 17 3.96 106.07 +Sample_1848F DEL chr17:48268744-48271987 3.24 chr17 48270365 112939..112949 11 7 35 35 16 5 -2.40 123.32 +Sample_1848F DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 27 99 99 28 16 -5.11 21.93 +Sample_1848F DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 7 75 99 6 22 4.89 92.72 +Sample_1848F DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 31 10.00 116.88 +Sample_1848F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 25 99 99 23 17 -4.22 21.84 +Sample_1848F DEL chr22:42536216-42537349 1.13 chr22 42536782 137431..137433 3 17 31 31 14 20 -4.58 73.70 +Sample_1848M DUP chr1:16895568-16976914 81.35 chr1 16936241 1945..1968 24 12 90 99 27 20 3.55 68.88 +Sample_1848M DUP chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 21 99 99 20 51 5.22 95.12 +Sample_1848M DEL chr1:161520321-161601158 80.84 chr1 161560739 11052..11060 9 19 59 59 27 18 -2.80 9.67 +Sample_1848M DUP chr2:114341230-114358421 17.19 chr2 114349825 19699..19708 10 35 95 96 29 17 2.94 57.22 +Sample_1848M DUP chr3:75470705-75480065 9.36 chr3 75475385 29262..29267 6 8 52 52 8 19 3.32 79.69 +Sample_1848M DEL chr3:195392937-195475935 83.00 chr3 195434436 32791..32802 12 10 98 99 8 14 -2.85 21.76 +Sample_1848M DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 11 95 97 5 13 4.34 68.61 +Sample_1848M DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 25 99 99 17 19 5.10 50.29 +Sample_1848M DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 21 41 41 32 8 -3.98 10.99 +Sample_1848M DUP chr8:12043861-12250923 207.06 chr8 12147392 55316..55320 5 15 64 64 7 24 3.99 51.54 +Sample_1848M DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 4 43 43 36 4 3.12 35.17 +Sample_1848M DUP chr12:8378432-8391345 12.91 chr12 8384888 80975..80977 3 9 47 47 14 9 4.96 81.11 +Sample_1848M DUP chr12:9573111-9578420 5.31 chr12 9575765 81136..81141 6 9 65 65 4 15 3.47 49.16 +Sample_1848M DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 34 99 99 34 14 4.74 39.84 +Sample_1848M DUP chr16:14989371-15045930 56.56 chr16 15017650 101198..101199 2 26 39 39 10 23 6.30 78.94 +Sample_1848M DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 16 77 77 16 15 -4.05 14.77 +Sample_1848M DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 30 31 31 27 28 -4.44 6.17 +Sample_1848M DUP chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 5 82 82 9 5 4.11 56.13 +Sample_1848M DUP chr17:39261641-39411837 150.20 chr17 39336739 111317..111331 15 15 68 68 15 20 2.39 76.00 +Sample_1848M DUP chr17:60342069-60351477 9.41 chr17 60346773 113673..113682 10 21 47 47 22 20 2.59 44.89 +Sample_1848M DEL chr19:3816672-3823401 6.73 chr19 3820036 119148..119153 6 22 46 46 24 5 -3.23 10.41 +Sample_1848M DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 12 68 68 23 12 -3.94 0.94 +Sample_1848M DUP chr19:55247287-55290114 42.83 chr19 55268700 128016..128023 8 2 99 99 3 5 3.45 26.12 +Sample_1848M DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 8 10.00 61.02 +Sample_1848M DUP chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 51 99 99 19 19 4.69 151.06 +Sample_1848M DUP chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 4 99 99 15 4 4.40 30.66 +Sample_1848P DEL chr1:12851546-12943231 91.69 chr1 12897388 1602..1619 18 18 99 99 18 3 -3.23 39.02 +Sample_1848P DUP chr1:16895568-16976914 81.35 chr1 16936241 1945..1968 24 17 86 99 43 0 3.73 108.71 +Sample_1848P DEL chr1:17017713-17046652 28.94 chr1 17032182 1969..1977 9 29 99 99 0 10 -5.82 27.83 +Sample_1848P DEL chr1:17090909-17281372 190.46 chr1 17186140 1986..2009 24 3 99 99 31 3 -5.61 53.02 +Sample_1848P DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 4 89 89 31 4 3.75 59.89 +Sample_1848P DUP chr1:161520321-161601158 80.84 chr1 161560739 11052..11060 9 18 80 80 14 20 2.98 49.59 +Sample_1848P DEL chr2:96697781-96698167 0.39 chr2 96697974 18726..18727 2 21 44 44 8 20 -6.33 0.75 +Sample_1848P DUP chr3:49722171-49724235 2.06 chr3 49723203 27599..27607 9 3 35 35 2 8 2.56 112.28 +Sample_1848P DUP chr3:195451098-195475935 24.84 chr3 195463516 32798..32802 5 8 41 41 9 8 3.51 79.05 +Sample_1848P DUP chr5:140165876-140264247 98.37 chr5 140215061 40578..40590 13 2 32 32 2 8 2.23 95.48 +Sample_1848P DUP chr6:304628-348841 44.21 chr6 326734 42799..42804 6 17 99 99 41 6 4.27 73.94 +Sample_1848P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 30 57 57 15 29 -3.75 58.10 +Sample_1848P DUP chr7:142457319-142482397 25.08 chr7 142469858 54056..54064 9 4 99 99 4 24 3.23 59.86 +Sample_1848P DUP chr8:7154584-7218758 64.17 chr8 7186671 55172..55177 6 15 44 44 5 4 3.22 52.67 +Sample_1848P DUP chr9:135939791-135958013 18.22 chr9 135948902 64283..64293 11 18 99 99 8 13 3.50 55.62 +Sample_1848P DEL chr10:46963840-47416976 453.14 chr10 47190408 66733..66744 12 3 99 99 5 3 -3.74 51.59 +Sample_1848P DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 97 99 99 39 30 -8.04 0.57 +Sample_1848P DUP chr11:64564454-64565006 0.55 chr11 64564730 75392..75395 4 12 34 34 33 9 3.86 152.29 +Sample_1848P DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 36 85 85 82 36 -3.69 16.96 +Sample_1848P DUP chr12:8376612-8385203 8.59 chr12 8380907 80973..80976 4 20 99 99 14 29 5.53 89.91 +Sample_1848P DUP chr12:31247524-31257725 10.20 chr12 31252624 81838..81852 15 4 90 93 18 4 2.43 78.91 +Sample_1848P DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 8 79 79 4 8 3.73 53.68 +Sample_1848P DUP chr15:41864641-41871526 6.89 chr15 41868083 95383..95387 5 23 99 99 18 22 4.60 68.00 +Sample_1848P DEL chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 13 37 37 13 18 -3.46 28.78 +Sample_1848P DUP chr15:78207740-78214113 6.37 chr15 78210926 98003..98015 13 5 98 99 4 23 2.69 118.76 +Sample_1848P DUP chr16:101558-148299 46.74 chr16 124928 99271..99305 35 2 99 99 4 3 4.45 78.64 +Sample_1848P DEL chr16:70148724-70195184 46.46 chr16 70171954 104879..104895 17 5 95 97 5 12 -2.38 25.85 +Sample_1848P DEL chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 12 99 99 11 21 -3.32 58.33 +Sample_1848P DUP chr17:39279347-39406904 127.56 chr17 39343125 111319..111330 12 10 72 72 8 10 2.61 110.42 +Sample_1848P DUP chr19:54724025-54725251 1.23 chr19 54724638 127861..127863 3 9 32 32 9 18 4.59 66.71 +Sample_1848P DUP chr19:54745902-54746724 0.82 chr19 54746313 127867..127869 3 47 93 93 10 15 6.12 70.17 +Sample_1848P DEL chr19:55247287-55327989 80.70 chr19 55287638 128016..128026 11 10 95 99 19 10 -4.06 3.26 +Sample_1848P DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 29 10.00 91.42 +Sample_1848P DUP chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 43 99 99 24 24 3.78 212.47 +Sample_1848P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 44 49 49 28 40 4.89 94.54 +Sample_1848P DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 35 99 99 42 20 -4.41 11.74 +Sample_1848P DUP chr22:24652721-24661490 8.77 chr22 24657105 135427..135431 5 31 99 99 10 18 4.80 152.93 +Sample_1848P DUP chr22:25041713-25055114 13.40 chr22 25048413 135494..135500 7 19 99 99 4 18 4.63 142.83 +Sample_1858F DUP chr1:32148795-32158755 9.96 chr1 32153775 3764..3787 24 16 99 99 15 16 2.21 50.74 +Sample_1858F DUP chr1:104108057-104166606 58.55 chr1 104137331 7333..7345 13 12 99 99 23 12 4.44 36.46 +Sample_1858F DUP chr3:48616802-48623289 6.49 chr3 48620045 27184..27215 32 7 97 99 20 10 2.13 61.84 +Sample_1858F DUP chr3:195410623-195475935 65.31 chr3 195443279 32796..32802 7 7 98 99 7 7 3.89 52.65 +Sample_1858F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 46 99 99 31 23 -4.57 32.57 +Sample_1858F DEL chr7:74197282-74306965 109.68 chr7 74252123 50910..50917 8 17 48 48 12 24 -2.91 29.42 +Sample_1858F DUP chr8:12008506-12250923 242.42 chr8 12129714 55314..55320 7 14 87 87 3 24 3.55 48.88 +Sample_1858F DEL chr9:90747881-90748584 0.70 chr9 90748232 61296..61297 2 48 49 49 8 11 -6.71 17.12 +Sample_1858F DUP chr10:135351255-135381779 30.52 chr10 135366517 70973..70987 15 3 99 99 3 25 3.11 46.31 +Sample_1858F DUP chr12:147946-149412 1.47 chr12 148679 79931..79932 2 12 41 41 7 41 6.21 61.42 +Sample_1858F DUP chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 6 99 99 36 6 3.77 43.03 +Sample_1858F DUP chr16:732077-733909 1.83 chr16 732993 99536..99544 9 4 46 46 3 5 2.65 64.88 +Sample_1858F DUP chr16:2213884-2220731 6.85 chr16 2217307 100163..100166 4 4 30 30 5 4 3.74 60.54 +Sample_1858F DEL chr16:14989371-15123913 134.54 chr16 15056642 101198..101213 16 63 99 99 6 16 -3.38 18.52 +Sample_1858F DUP chr17:16667279-16736147 68.87 chr17 16701713 109038..109050 13 16 98 99 16 30 4.33 43.54 +Sample_1858F DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 27 98 99 15 24 -3.04 10.23 +Sample_1858F DUP chr19:17443739-17450408 6.67 chr19 17447073 122450..122460 11 27 99 99 35 27 3.84 51.45 +Sample_1858F DEL chr19:43349168-43530631 181.46 chr19 43439899 125377..125396 20 6 99 99 7 6 -2.80 11.78 +Sample_1858F DEL chr19:55239077-55290114 51.04 chr19 55264595 128015..128023 9 5 84 84 7 4 -3.00 2.16 +Sample_1858F DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 32 99 99 32 17 -4.23 6.61 +Sample_1858F DUP chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 12 99 99 13 11 4.20 30.44 +Sample_1858F DEL chr22:25041713-25045989 4.28 chr22 25043851 135494..135498 5 12 47 47 13 19 -3.60 58.12 +Sample_1858F DEL chr22:42905034-42914153 9.12 chr22 42909593 137453..137459 7 7 82 82 7 6 -3.34 16.62 +Sample_1858M DUP chr1:17086647-17275019 188.37 chr1 17180833 1984..2004 21 10 99 99 3 6 2.45 49.78 +Sample_1858M DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 23 35 35 11 23 -3.75 24.51 +Sample_1858M DUP chr5:795720-837595 41.88 chr5 816657 37326..37332 7 21 37 37 25 4 2.91 27.30 +Sample_1858M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 31 72 72 18 26 -3.97 25.96 +Sample_1858M DUP chr7:72643601-72649368 5.77 chr7 72646484 50675..50677 3 20 72 72 37 12 5.61 32.50 +Sample_1858M DUP chr7:76610139-76631638 21.50 chr7 76620888 51094..51097 4 37 99 99 40 9 5.81 42.36 +Sample_1858M DUP chr8:144894987-144895544 0.56 chr8 144895265 58934..58936 3 35 45 45 12 42 4.93 75.41 +Sample_1858M DUP chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 6 99 99 5 6 4.23 43.47 +Sample_1858M DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 37 60 60 28 24 -7.21 18.48 +Sample_1858M DUP chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 16 63 63 12 18 3.85 35.20 +Sample_1858M DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 34 34 34 22 34 5.92 26.70 +Sample_1858M DUP chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 10 95 97 10 27 5.00 33.31 +Sample_1858M DEL chr16:1279191-1292554 13.36 chr16 1285872 99711..99717 7 5 84 84 3 17 -3.38 18.49 +Sample_1858M DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 11 98 99 3 33 3.42 30.15 +Sample_1858M DEL chr17:18292171-18430160 137.99 chr17 18361165 109353..109365 13 4 98 99 4 20 -3.38 6.06 +Sample_1858M DUP chr19:17443739-17450408 6.67 chr19 17447073 122450..122460 11 40 99 99 20 28 4.32 39.69 +Sample_1858M DEL chr19:43348511-43441330 92.82 chr19 43394920 125376..125392 17 6 99 99 6 13 -2.67 9.53 +Sample_1858M DUP chr19:55315346-55341435 26.09 chr19 55328390 128025..128028 4 9 35 35 8 4 3.88 19.71 +Sample_1858M DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 3 79 79 3 18 3.30 20.23 +Sample_1858M DUP chr22:42522502-42525187 2.69 chr22 42523844 137422..137428 7 7 99 99 7 14 4.40 56.44 +Sample_1858P DEL chr1:12908238-12946025 37.79 chr1 12927131 1611..1620 10 7 99 99 6 7 -3.41 7.51 +Sample_1858P DUP chr1:16374999-16380267 5.27 chr1 16377633 1844..1853 10 3 41 41 10 3 2.51 13.82 +Sample_1858P DEL chr1:16913545-17034573 121.03 chr1 16974059 1952..1976 25 10 99 99 5 6 -2.66 16.28 +Sample_1858P DEL chr1:17250820-17272900 22.08 chr1 17261860 1989..2002 14 4 99 99 3 4 -3.35 14.67 +Sample_1858P DUP chr1:104112026-104166606 54.58 chr1 104139316 7334..7345 12 16 99 99 9 16 3.51 13.88 +Sample_1858P DEL chr3:49848706-49850171 1.47 chr3 49849438 27700..27704 5 14 47 47 14 21 -3.62 28.38 +Sample_1858P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 47 99 99 15 26 -5.18 11.41 +Sample_1858P DUP chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 9 99 99 19 9 3.65 20.13 +Sample_1858P DUP chr15:78208169-78215352 7.18 chr15 78211760 98005..98017 13 3 96 98 39 3 2.63 26.20 +Sample_1858P DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 40 98 99 16 33 4.22 18.65 +Sample_1924F DUP chr1:12853352-12943231 89.88 chr1 12898291 1603..1619 17 5 59 59 5 15 2.23 86.24 +Sample_1924F DEL chr1:16382917-16388687 5.77 chr1 16385802 1856..1861 6 5 63 63 9 8 -3.47 51.56 +Sample_1924F DEL chr1:16895568-16955145 59.58 chr1 16925356 1945..1965 21 23 99 99 8 23 -4.50 84.97 +Sample_1924F DEL chr1:17017713-17275421 257.71 chr1 17146567 1969..2005 37 30 99 99 13 17 -5.49 84.97 +Sample_1924F DEL chr1:25598981-25633220 34.24 chr1 25616100 3040..3046 7 4 39 39 5 9 -2.89 34.91 +Sample_1924F DEL chr2:220072978-220073361 0.38 chr2 220073169 23181..23183 3 9 54 54 25 8 -5.14 109.84 +Sample_1924F DUP chr3:195456519-195475935 19.42 chr3 195466227 32800..32802 3 64 66 66 10 11 5.48 120.49 +Sample_1924F DUP chr4:1741429-1741729 0.30 chr4 1741579 33264..33265 2 54 60 60 30 23 7.19 157.46 +Sample_1924F DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 54 75 75 38 35 7.77 158.06 +Sample_1924F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 11 52 52 19 10 -3.67 80.04 +Sample_1924F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 23 99 99 17 23 5.57 89.61 +Sample_1924F DUP chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 4 60 60 3 11 3.11 65.13 +Sample_1924F DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 5 77 99 14 0 4.08 88.89 +Sample_1924F DEL chr8:12245467-12287960 42.49 chr8 12266713 55318..55322 5 6 99 99 1 6 -4.56 37.03 +Sample_1924F DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 5 89 90 6 5 3.77 73.65 +Sample_1924F DEL chr10:135368348-135370660 2.31 chr10 135369504 70975..70980 6 5 41 41 8 7 -3.17 109.13 +Sample_1924F DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 17 36 36 17 6 -6.23 62.31 +Sample_1924F DEL chr15:23299681-23300167 0.49 chr15 23299924 94425..94426 2 32 33 33 4 5 -5.94 130.83 +Sample_1924F DUP chr16:34614340-34714967 100.63 chr16 34664653 103107..103111 5 10 42 42 3 30 3.47 62.65 +Sample_1924F DUP chr16:70162687-70195184 32.50 chr16 70178935 104882..104895 14 20 99 99 11 36 4.17 77.74 +Sample_1924F DUP chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 24 99 99 22 25 7.13 143.12 +Sample_1924F DUP chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 58 67 67 23 14 7.48 179.43 +Sample_1924F DUP chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 29 51 51 12 10 5.05 68.35 +Sample_1924F DEL chr17:39240459-39334460 94.00 chr17 39287459 111315..111323 9 9 73 73 9 33 -2.95 133.81 +Sample_1924F DUP chr19:14508470-14512375 3.91 chr19 14510422 121773..121776 4 7 61 61 25 5 4.37 64.93 +Sample_1924F DEL chr19:14876336-14876616 0.28 chr19 14876476 121892..121893 2 58 81 81 8 17 -7.98 64.92 +Sample_1924F DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 24 95 97 20 9 -4.36 50.43 +Sample_1924F DEL chr19:54724398-54725251 0.85 chr19 54724824 127862..127863 2 33 41 41 40 3 -6.36 15.38 +Sample_1924F DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 41 99 99 15 21 -6.15 53.06 +Sample_1924F DEL chr19:55331168-55361964 30.80 chr19 55346566 128027..128034 8 5 48 48 2 25 -2.80 17.29 +Sample_1924F DEL chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 18 99 99 17 18 -5.09 258.86 +Sample_1924F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 3 99 99 3 9 -4.52 22.42 +Sample_1924F DEL chr22:23652511-23656901 4.39 chr22 23654706 135260..135264 5 3 48 48 3 3 -3.55 178.27 +Sample_1924F DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 23 99 99 4 13 -6.63 0.29 +Sample_1924M DEL chr1:14363-70008 55.65 chr1 42185 1..5 5 10 36 36 0 10 -3.37 39.59 +Sample_1924M DEL chr1:1634915-1677431 42.52 chr1 1656173 370..382 13 4 99 99 2 15 -3.30 30.20 +Sample_1924M DEL chr1:16914220-17085530 171.31 chr1 16999875 1953..1980 28 11 99 99 14 14 -5.08 134.15 +Sample_1924M DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 10 40 40 8 10 3.13 83.57 +Sample_1924M DEL chr1:144994591-145297691 303.10 chr1 145146141 8385..8401 17 10 85 85 17 1 -2.39 83.97 +Sample_1924M DEL chr1:148003643-148017665 14.02 chr1 148010654 8604..8606 3 24 51 51 44 14 -4.91 9.68 +Sample_1924M DEL chr1:161559352-161601158 41.81 chr1 161580255 11053..11060 8 18 99 99 14 19 -4.03 23.73 +Sample_1924M DEL chr2:114341230-114356605 15.38 chr2 114348917 19699..19707 9 41 99 99 20 19 -3.84 106.48 +Sample_1924M DUP chr3:48610607-48614460 3.85 chr3 48612533 27161..27179 19 8 49 49 8 5 2.10 174.66 +Sample_1924M DEL chr3:75470705-75484266 13.56 chr3 75477485 29262..29269 8 67 99 99 76 43 -8.32 78.99 +Sample_1924M DUP chr3:195390957-195475935 84.98 chr3 195433446 32790..32802 13 11 99 99 9 6 4.50 114.67 +Sample_1924M DEL chr5:140165876-140627799 461.92 chr5 140396837 40578..40611 34 16 99 99 10 17 -2.68 97.91 +Sample_1924M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 48 99 99 13 3 -4.81 96.32 +Sample_1924M DEL chr7:102114808-102257205 142.40 chr7 102186006 52449..52456 8 10 99 99 19 10 -3.65 40.37 +Sample_1924M DUP chr8:7308087-7320381 12.29 chr8 7314234 55180..55182 3 33 98 99 14 26 6.16 98.63 +Sample_1924M DUP chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 5 99 99 35 5 4.68 113.20 +Sample_1924M DEL chr8:114388967-114389382 0.42 chr8 114389174 57950..57951 2 12 32 32 29 12 -5.88 83.10 +Sample_1924M DEL chr9:141069815-141071884 2.07 chr9 141070849 65438..65440 3 42 84 84 24 16 -5.81 126.23 +Sample_1924M DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 99 99 99 28 41 9.66 270.16 +Sample_1924M DEL chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 15 68 68 14 12 -2.52 103.48 +Sample_1924M DEL chr11:123886282-123909708 23.43 chr11 123897995 79305..79308 4 45 80 80 17 12 -4.65 93.24 +Sample_1924M DEL chr12:8376045-8395542 19.50 chr12 8385793 80972..80978 7 17 99 99 15 29 -3.63 100.00 +Sample_1924M DUP chr12:9447028-9466684 19.66 chr12 9456856 81112..81129 18 33 99 99 14 0 3.55 107.68 +Sample_1924M DEL chr12:9570288-9600768 30.48 chr12 9585528 81130..81151 22 28 99 99 0 29 -3.58 52.28 +Sample_1924M DEL chr13:24465429-24465751 0.32 chr13 24465590 88167..88168 2 38 46 46 24 11 -6.64 31.12 +Sample_1924M DEL chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 5 32 32 28 4 -3.14 35.45 +Sample_1924M DEL chr15:23262275-23300167 37.89 chr15 23281221 94423..94426 4 7 99 99 2 4 -5.82 80.51 +Sample_1924M DUP chr15:23443500-23444098 0.60 chr15 23443799 94437..94438 2 42 62 62 12 55 6.99 152.12 +Sample_1924M DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 41 64 64 17 1 -5.22 45.28 +Sample_1924M DUP chr16:97000-148299 51.30 chr16 122649 99270..99305 36 9 99 99 0 15 5.54 134.05 +Sample_1924M DEL chr16:14988855-15123913 135.06 chr16 15056384 101197..101213 17 22 99 99 12 25 -2.53 62.46 +Sample_1924M DEL chr16:21469092-21513552 44.46 chr16 21491322 101743..101747 5 17 86 87 5 8 -4.19 33.90 +Sample_1924M DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 21 99 99 7 4 -3.97 73.64 +Sample_1924M DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 13 99 99 11 13 -6.18 66.34 +Sample_1924M DUP chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 24 98 99 3 23 6.25 158.19 +Sample_1924M DEL chr17:39164774-39412615 247.84 chr17 39288694 111308..111332 25 2 98 99 3 11 -2.65 135.98 +Sample_1924M DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 19 55 55 21 12 -3.73 33.67 +Sample_1924M DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 30 54 54 12 11 3.72 106.80 +Sample_1924M DEL chr19:43708038-43763287 55.25 chr19 43735662 125407..125410 4 31 79 79 26 13 -4.80 36.31 +Sample_1924M DEL chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 22 49 49 10 28 -5.06 74.86 +Sample_1924M DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 47 47 47 28 11 6.63 186.55 +Sample_1924M DEL chr19:54724398-54726959 2.56 chr19 54725678 127862..127865 4 66 89 89 40 18 -4.88 30.35 +Sample_1924M DUP chr19:55239077-55264503 25.43 chr19 55251790 128015..128020 6 2 95 96 4 5 3.87 58.65 +Sample_1924M DEL chr21:45970318-46117959 147.64 chr21 46044138 134151..134167 17 29 99 99 4 18 -3.29 280.78 +Sample_1924M DUP chr22:20388507-20398336 9.83 chr22 20393421 134922..134925 4 39 54 54 12 24 4.16 68.28 +Sample_1924M DEL chr22:21057921-21067085 9.16 chr22 21062503 134968..134976 9 4 99 99 4 14 -3.99 101.70 +Sample_1924M DUP chr22:21828886-21834291 5.41 chr22 21831588 135112..135116 5 26 42 42 19 3 3.48 103.83 +Sample_1924M DEL chr22:42525740-42538881 13.14 chr22 42532310 137429..137437 9 2 70 70 2 21 -2.87 108.28 +Sample_1924P DUP chr1:16918654-16972173 53.52 chr1 16945413 1956..1966 11 13 94 99 24 14 4.29 131.99 +Sample_1924P DUP chr1:17017713-17046652 28.94 chr1 17032182 1969..1977 9 20 88 99 30 1 3.76 71.34 +Sample_1924P DEL chr1:17081402-17264978 183.58 chr1 17173190 1978..1997 20 8 78 99 0 17 -4.83 62.37 +Sample_1924P DUP chr2:70515200-70529220 14.02 chr2 70522210 17686..17690 5 6 99 99 6 23 4.54 66.31 +Sample_1924P DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 68 99 99 5 7 6.28 98.34 +Sample_1924P DEL chr8:12039614-12287960 248.35 chr8 12163787 55315..55322 8 15 71 71 3 13 -3.18 32.59 +Sample_1924P DEL chr10:135368855-135370326 1.47 chr10 135369590 70976..70979 4 18 97 99 18 16 -5.13 81.83 +Sample_1924P DUP chr11:71504426-71507212 2.79 chr11 71505819 76833..76834 2 39 61 61 5 29 7.14 133.38 +Sample_1924P DUP chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 6 93 94 6 6 2.93 51.95 +Sample_1924P DUP chr12:11506008-11508524 2.52 chr12 11507266 81255..81258 4 3 32 32 30 3 3.70 49.77 +Sample_1924P DUP chr14:76837690-77333781 496.09 chr14 77085735 92801..92838 38 18 99 99 8 12 3.11 43.79 +Sample_1924P DUP chr15:20776609-21134625 358.02 chr15 20955617 94350..94354 5 15 58 58 15 56 4.00 39.57 +Sample_1924P DUP chr15:41859558-41871526 11.97 chr15 41865542 95375..95387 13 6 53 53 5 14 2.34 53.22 +Sample_1924P DUP chr15:102516336-102516807 0.47 chr15 102516571 99269..99269 1 31 31 31 24 31 10.00 131.64 +Sample_1924P DEL chr16:3076680-3077281 0.60 chr16 3076980 100446..100449 4 15 45 45 26 15 -4.09 131.09 +Sample_1924P DUP chr16:34612943-34714967 102.03 chr16 34663955 103106..103111 6 34 99 99 34 41 4.47 47.54 +Sample_1924P DEL chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 32 93 94 33 26 -3.53 61.04 +Sample_1924P DEL chr21:45959068-46032871 73.80 chr21 45995969 134150..134159 10 35 99 99 10 4 -3.76 174.05 +Sample_1924P DEL chr22:18766903-18769844 2.94 chr22 18768373 134658..134659 2 11 35 35 34 11 -6.14 21.64 +Sample_1924P DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 22 89 89 4 15 -3.72 11.19 +Sample_1924P DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 2 48 48 3 4 2.69 38.47 +Sample_1924P DEL chr22:42524786-42537685 12.90 chr22 42531235 137427..137434 8 12 80 80 11 16 -3.17 55.81 +Sample_341F DEL chr1:16914220-16955145 40.93 chr1 16934682 1953..1965 13 8 99 99 9 14 -2.84 49.69 +Sample_341F DEL chr1:17250820-17273486 22.67 chr1 17262153 1989..2003 15 22 99 99 6 15 -3.93 41.20 +Sample_341F DUP chr1:36773118-36773810 0.69 chr1 36773464 4351..4354 4 4 47 47 5 6 4.07 85.13 +Sample_341F DUP chr3:127295460-127298715 3.26 chr3 127297087 30504..30507 4 3 56 56 27 3 4.24 60.91 +Sample_341F DUP chr5:176016331-176017486 1.16 chr5 176016908 42156..42160 5 4 33 33 23 4 3.37 57.57 +Sample_341F DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 26 99 99 27 24 5.46 63.81 +Sample_341F DEL chr10:124340382-124353114 12.73 chr10 124346748 70419..70426 8 18 99 99 13 16 -4.84 15.58 +Sample_341F DEL chr11:61248592-61258056 9.46 chr11 61253324 74566..74576 11 27 99 99 15 16 -3.02 10.44 +Sample_341F DUP chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 17 99 99 17 13 4.95 32.61 +Sample_341F DUP chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 14 99 99 9 18 3.22 33.40 +Sample_341F DEL chr15:23299915-23444098 144.18 chr15 23372006 94426..94438 13 12 47 47 11 12 -2.35 12.43 +Sample_341F DUP chr16:3076517-3077074 0.56 chr16 3076795 100445..100448 4 7 75 75 7 6 4.62 108.67 +Sample_341F DEL chr16:74443448-74452196 8.75 chr16 74447822 105292..105298 7 15 99 99 14 15 -4.64 25.72 +Sample_341F DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 14 98 99 25 14 2.96 35.54 +Sample_341F DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 20 98 99 9 20 -4.95 2.89 +Sample_341F DUP chr17:48269341-48273337 4.00 chr17 48271339 112941..112955 15 7 87 87 17 7 2.45 60.05 +Sample_341F DEL chr19:40368303-40396396 28.09 chr19 40382349 124706..124717 12 10 33 33 9 7 -2.33 16.09 +Sample_341F DEL chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 32 70 70 14 30 -3.95 7.37 +Sample_341F DEL chr22:42905034-42973104 68.07 chr22 42939069 137453..137470 18 2 83 83 3 7 -2.28 16.02 +Sample_341F DUP chr22:50017826-50018329 0.50 chr22 50018077 137887..137888 2 9 32 32 32 8 6.09 193.84 +Sample_341M DEL chr1:16952270-16976914 24.64 chr1 16964592 1964..1968 5 4 99 99 18 4 -5.01 54.52 +Sample_341M DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 12 98 98 26 12 -3.26 48.85 +Sample_341M DUP chr1:36773118-36773564 0.45 chr1 36773341 4351..4353 3 43 60 60 27 8 5.30 86.60 +Sample_341M DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 7 30 30 6 20 2.89 41.67 +Sample_341M DUP chr3:48611288-48612298 1.01 chr3 48611793 27165..27169 5 21 62 62 22 8 3.84 77.59 +Sample_341M DUP chr9:35684243-35685663 1.42 chr9 35684953 60480..60486 7 5 38 38 3 12 2.88 47.80 +Sample_341M DUP chr11:1279329-1280291 0.96 chr11 1279810 71490..71492 3 20 41 41 28 11 4.82 43.86 +Sample_341M DEL chr12:8376612-8391345 14.73 chr12 8383978 80973..80977 5 7 57 57 3 13 -3.72 25.98 +Sample_341M DUP chr12:9447413-9456803 9.39 chr12 9452108 81113..81121 9 36 39 39 10 27 2.64 22.51 +Sample_341M DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 54 77 77 23 14 -7.86 22.75 +Sample_341M DUP chr15:21134198-22414393 1280.20 chr15 21774295 94353..94366 14 3 99 99 18 3 3.00 27.98 +Sample_341M DUP chr15:75562413-75581824 19.41 chr15 75572118 97823..97825 3 3 44 44 3 14 4.83 28.06 +Sample_341M DUP chr17:48272408-48274031 1.62 chr17 48273219 112951..112959 9 18 99 99 26 13 3.39 54.76 +Sample_341M DUP chr19:55249974-55266508 16.54 chr19 55258241 128018..128021 4 33 65 65 3 3 4.38 29.28 +Sample_341M DEL chr22:42905034-42950048 45.02 chr22 42927541 137453..137460 8 12 99 99 3 6 -3.39 6.47 +Sample_341M DUP chrX:48837627-48838284 0.66 chrX 48837955 139394..139397 4 5 54 54 24 5 4.22 79.14 +Sample_341P DEL chr1:16914220-16972173 57.95 chr1 16943196 1953..1966 14 17 99 99 22 19 -2.92 47.52 +Sample_341P DEL chr1:17084437-17086181 1.75 chr1 17085309 1979..1982 4 15 48 48 11 24 -4.14 53.41 +Sample_341P DEL chr1:17256341-17275421 19.08 chr1 17265881 1990..2005 16 13 99 99 4 7 -3.26 38.42 +Sample_341P DUP chr1:144865810-144906537 40.73 chr1 144886173 8352..8369 18 4 99 99 5 8 2.43 31.48 +Sample_341P DUP chr1:145368441-145727749 359.31 chr1 145548095 8413..8535 123 8 99 99 3 5 2.46 25.23 +Sample_341P DUP chr3:48618881-48620481 1.60 chr3 48619681 27194..27201 8 8 99 99 13 8 3.67 73.51 +Sample_341P DEL chr3:48628106-48629447 1.34 chr3 48628776 27231..27234 4 5 32 32 5 6 -3.79 42.05 +Sample_341P DUP chr3:195395390-195475935 80.55 chr3 195435662 32792..32802 11 3 46 46 3 18 2.50 37.30 +Sample_341P DUP chr6:304628-351353 46.73 chr6 327990 42799..42805 7 8 88 88 36 6 3.44 34.68 +Sample_341P DUP chr6:168348973-168479839 130.87 chr6 168414406 48223..48247 25 5 99 99 2 41 3.24 31.84 +Sample_341P DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 6 41 41 26 6 3.87 36.29 +Sample_341P DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 12 99 99 6 23 -4.14 15.53 +Sample_341P DUP chr11:64564454-64564664 0.21 chr11 64564559 75392..75393 2 18 32 32 23 16 6.11 107.74 +Sample_341P DUP chr12:9589543-9590085 0.54 chr12 9589814 81149..81150 2 45 47 47 15 30 6.63 46.32 +Sample_341P DUP chr13:114586610-114601845 15.24 chr13 114594227 89993..89995 3 17 33 33 14 25 4.62 75.43 +Sample_341P DUP chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 45 99 99 80 28 4.75 31.30 +Sample_341P DUP chr15:72957937-72958469 0.53 chr15 72958203 97498..97500 3 11 65 65 11 13 5.44 57.88 +Sample_341P DUP chr16:28997034-28997209 0.18 chr16 28997121 102391..102392 2 26 30 30 29 20 6.03 75.68 +Sample_341P DEL chr16:74385938-74452196 66.26 chr16 74419067 105286..105298 13 4 98 99 4 15 -4.63 13.12 +Sample_341P DEL chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 28 76 76 19 21 -3.11 11.98 +Sample_341P DUP chr17:39240459-39412615 172.16 chr17 39326537 111315..111332 18 9 99 99 32 9 2.93 65.59 +Sample_341P DUP chr17:76128422-76129623 1.20 chr17 76129022 115337..115340 4 9 51 51 48 9 4.20 77.69 +Sample_341P DEL chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 34 91 91 25 22 -4.28 5.60 +Sample_341P DEL chr19:54784816-54803978 19.16 chr19 54794397 127894..127900 7 5 79 99 5 23 -4.10 18.07 +Sample_341P DUP chr19:55417508-55417692 0.18 chr19 55417600 128042..128043 2 27 31 31 21 21 6.09 99.13 +Sample_341P DUP chr21:45959068-46086844 127.78 chr21 46022956 134150..134165 16 4 99 99 25 4 3.19 120.07 +Sample_341P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 41 49 49 24 38 4.87 53.95 +Sample_341P DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 15 99 99 13 23 4.41 30.63 +Sample_341P DEL chr22:21828886-21842312 13.43 chr22 21835599 135112..135119 8 37 99 99 20 24 -3.49 12.13 +Sample_381F DEL chr1:17017713-17275019 257.31 chr1 17146366 1969..2004 36 8 99 99 23 3 -4.10 16.30 +Sample_381F DEL chr1:149374998-149399229 24.23 chr1 149387113 8611..8613 3 30 31 31 3 31 -4.34 0.12 +Sample_381F DUP chr3:195395390-195447954 52.56 chr3 195421672 32792..32797 6 30 95 97 3 18 3.91 26.34 +Sample_381F DUP chr5:21495207-21497349 2.14 chr5 21496278 37853..37854 2 34 35 35 29 8 6.15 35.34 +Sample_381F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 31 97 99 10 5 -4.41 18.40 +Sample_381F DEL chr15:23443500-23444098 0.60 chr15 23443799 94437..94438 2 30 30 30 4 30 -5.66 8.96 +Sample_381F DUP chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 12 30 30 6 17 4.52 67.01 +Sample_381F DUP chr16:70148724-70195184 46.46 chr16 70171954 104879..104895 17 7 41 41 8 8 2.13 17.19 +Sample_381F DUP chr17:5039103-5042969 3.87 chr17 5041036 107378..107383 6 7 46 46 8 7 3.23 46.14 +Sample_381F DEL chr19:39911589-39911939 0.35 chr19 39911764 124598..124600 3 6 60 60 6 6 -5.24 31.26 +Sample_381F DEL chr19:43585033-43763287 178.25 chr19 43674160 125399..125410 12 8 97 99 23 7 -2.81 5.75 +Sample_381F DUP chr19:45851199-45852860 1.66 chr19 45852029 125800..125803 4 5 40 40 5 3 3.91 28.39 +Sample_381F DUP chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 64 99 99 8 19 5.54 19.23 +Sample_381F DEL chr22:21061981-21066899 4.92 chr22 21064440 134971..134975 5 17 75 75 17 4 -4.02 21.71 +Sample_381F DEL chr22:21834048-21842312 8.27 chr22 21838180 135115..135119 5 4 73 73 8 6 -3.90 8.57 +Sample_381M DUP chr1:16894474-16920062 25.59 chr1 16907268 1944..1957 14 23 78 78 25 29 2.47 21.97 +Sample_381M DUP chr1:16952270-16976914 24.64 chr1 16964592 1964..1968 5 22 92 99 49 0 4.75 38.68 +Sample_381M DUP chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 27 86 86 15 1 3.16 29.51 +Sample_381M DEL chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 5 85 99 0 7 -3.55 10.13 +Sample_381M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 53 99 99 24 23 -5.75 11.00 +Sample_381M DEL chr8:11853703-12044126 190.42 chr8 11948914 55310..55316 7 2 50 50 2 11 -3.14 8.92 +Sample_381M DUP chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 28 65 65 11 26 5.34 27.23 +Sample_381M DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 99 99 99 15 26 10.00 58.29 +Sample_381M DEL chr15:72958123-72958469 0.35 chr15 72958296 97499..97500 2 12 35 35 13 11 -6.22 12.31 +Sample_381M DUP chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 26 98 99 13 11 3.92 28.58 +Sample_381M DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 4 87 87 15 4 2.74 13.73 +Sample_381M DUP chr19:43358101-43441330 83.23 chr19 43399715 125378..125392 15 4 31 31 3 19 2.14 11.77 +Sample_381M DUP chr21:10921934-10934997 13.06 chr21 10928465 132958..132961 4 3 59 59 2 4 4.23 21.78 +Sample_381M DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 6 99 99 18 5 3.61 12.29 +Sample_381P DUP chr1:12851546-12921764 70.22 chr1 12886655 1602..1616 15 3 78 80 2 4 2.39 23.93 +Sample_381P DEL chr1:16907915-16955145 47.23 chr1 16931530 1950..1965 16 31 99 99 16 8 -3.79 20.07 +Sample_381P DEL chr1:17017713-17275421 257.71 chr1 17146567 1969..2005 37 19 99 99 8 16 -3.88 16.50 +Sample_381P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 11 90 91 11 10 -4.25 16.27 +Sample_381P DEL chr7:101957651-101989117 31.47 chr7 101973384 52419..52421 3 26 34 34 10 21 -4.68 15.65 +Sample_381P DEL chr8:11979496-12044126 64.63 chr8 12011811 55311..55316 6 14 30 30 14 5 -3.08 12.52 +Sample_381P DUP chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 34 40 40 40 9 3.53 15.44 +Sample_381P DUP chr15:78206559-78213962 7.40 chr15 78210260 98002..98014 13 4 99 99 11 4 2.97 38.63 +Sample_381P DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 20 43 43 42 20 4.82 22.30 +Sample_381P DUP chr19:10738398-10745931 7.53 chr19 10742164 120854..120864 11 19 37 37 19 15 2.43 25.31 +Sample_381P DEL chr19:40389652-40408135 18.48 chr19 40398893 124714..124721 8 3 32 32 3 13 -2.68 10.23 +Sample_381P DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 26 99 99 24 20 5.43 21.14 +Sample_543F DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 3 35 35 0 3 3.32 73.65 +Sample_543F DEL chr1:12907236-12921764 14.53 chr1 12914500 1610..1616 7 3 58 81 2 7 -3.34 38.39 +Sample_543F DEL chr1:16946340-16972173 25.83 chr1 16959256 1963..1966 4 23 37 37 27 0 -4.08 160.88 +Sample_543F DUP chr1:16975251-17033914 58.66 chr1 17004582 1967..1974 8 22 61 61 0 23 3.08 122.43 +Sample_543F DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 4 99 99 23 4 3.22 125.81 +Sample_543F DEL chr1:148932786-149399229 466.44 chr1 149166007 8609..8613 5 37 70 70 10 39 -4.28 67.57 +Sample_543F DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 55 99 99 34 23 -5.12 55.02 +Sample_543F DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 5 99 99 20 2 4.77 107.16 +Sample_543F DUP chr2:130949321-130956034 6.71 chr2 130952677 20175..20179 5 31 59 59 35 28 3.70 79.41 +Sample_543F DUP chr2:233243681-233246077 2.40 chr2 233244879 23897..23904 8 8 99 99 8 28 3.42 132.07 +Sample_543F DUP chr3:195392937-195475935 83.00 chr3 195434436 32791..32802 12 7 99 99 6 11 3.45 86.43 +Sample_543F DUP chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 5 72 72 22 5 4.43 125.34 +Sample_543F DUP chr5:814876-825366 10.49 chr5 820121 37328..37330 3 4 50 50 4 7 4.95 78.94 +Sample_543F DEL chr6:292101-351353 59.25 chr6 321727 42798..42805 8 3 99 99 3 10 -4.62 26.21 +Sample_543F DUP chr6:168344082-168479839 135.76 chr6 168411960 48220..48247 28 13 99 99 4 33 3.44 66.11 +Sample_543F DUP chr7:72643601-72649368 5.77 chr7 72646484 50675..50677 3 16 34 34 32 11 4.66 73.77 +Sample_543F DUP chr7:76610139-76631638 21.50 chr7 76620888 51094..51097 4 62 99 99 42 13 6.18 103.42 +Sample_543F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 22 99 99 16 15 5.16 80.94 +Sample_543F DEL chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 8 35 35 8 35 -3.19 22.69 +Sample_543F DEL chr8:7305276-7308721 3.45 chr8 7306998 55179..55181 3 21 37 37 21 12 -4.66 1.93 +Sample_543F DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 34 40 40 29 27 -3.87 28.02 +Sample_543F DUP chr11:71502785-71512276 9.49 chr11 71507530 76832..76835 4 12 74 74 19 13 4.52 163.48 +Sample_543F DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 87 99 99 26 9 9.13 148.80 +Sample_543F DUP chr14:19377594-20404761 1027.17 chr14 19891177 90039..90047 9 17 99 99 17 17 6.71 74.83 +Sample_543F DEL chr15:22145703-22145802 0.10 chr15 22145752 94359..94359 1 33 33 33 4 33 -10.00 36.17 +Sample_543F DEL chr15:23299681-23444098 144.42 chr15 23371889 94425..94438 14 5 95 97 15 42 -2.56 36.93 +Sample_543F DEL chr15:75562173-75585505 23.33 chr15 75573839 97822..97826 5 9 99 99 12 9 -4.57 1.90 +Sample_543F DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 53 54 54 54 38 6.68 59.91 +Sample_543F DUP chr16:55850836-55857595 6.76 chr16 55854215 103458..103462 5 11 67 67 2 13 3.85 74.75 +Sample_543F DUP chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 56 82 82 5 4 7.88 165.14 +Sample_543F DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 16 59 59 15 17 -3.36 58.38 +Sample_543F DUP chr17:20355108-20799453 444.35 chr17 20577280 109567..109578 12 9 98 99 8 10 3.11 82.46 +Sample_543F DUP chr17:60344494-60345600 1.11 chr17 60345047 113674..113676 3 45 48 48 25 12 4.99 129.94 +Sample_543F DEL chr19:10665961-10668736 2.78 chr19 10667348 120826..120829 4 22 34 34 5 11 -3.85 75.26 +Sample_543F DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 4 81 84 22 4 4.15 58.92 +Sample_543F DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 11 41 41 13 3 -3.47 52.46 +Sample_543F DUP chr19:55239077-55294990 55.91 chr19 55267033 128015..128024 10 2 99 99 3 7 3.80 46.17 +Sample_543F DUP chr22:16256332-16279301 22.97 chr22 16267816 134510..134512 3 24 48 48 24 27 4.85 70.25 +Sample_543F DUP chr22:24342269-24384284 42.02 chr22 24363276 135354..135361 8 9 61 61 7 13 2.97 56.06 +Sample_543F DUP chr22:24647589-24658575 10.99 chr22 24653082 135426..135430 5 4 40 40 3 30 3.48 182.50 +Sample_543F DEL chr22:25024048-25049017 24.97 chr22 25036532 135488..135499 12 5 99 99 5 13 -3.05 103.81 +Sample_543F DUP chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 31 99 99 19 24 5.75 81.93 +Sample_543F DUP chr22:39427699-39441547 13.85 chr22 39434623 136965..136971 7 67 99 99 22 24 4.11 66.14 +Sample_543F DEL chr22:50960170-50960680 0.51 chr22 50960425 138221..138223 3 17 96 97 12 10 -6.24 135.28 +Sample_543M DUP chr1:12851546-12887689 36.14 chr1 12869617 1602..1607 6 6 45 45 20 6 3.26 100.65 +Sample_543M DUP chr1:12918840-12955703 36.86 chr1 12937271 1614..1622 9 10 99 99 10 7 3.35 74.31 +Sample_543M DUP chr1:16383364-16390131 6.77 chr1 16386747 1857..1863 7 3 71 71 3 3 3.16 86.42 +Sample_543M DUP chr1:16900982-17034573 133.59 chr1 16967777 1946..1976 31 8 99 99 8 5 4.06 129.59 +Sample_543M DUP chr1:104108057-104122147 14.09 chr1 104115102 7333..7341 9 20 99 99 18 3 5.34 70.51 +Sample_543M DEL chr1:148932786-149399229 466.44 chr1 149166007 8609..8613 5 50 99 99 13 43 -4.78 76.98 +Sample_543M DEL chr1:155185354-155185578 0.23 chr1 155185466 9808..9809 2 50 50 50 21 18 -6.82 120.25 +Sample_543M DUP chr1:155581007-155583557 2.55 chr1 155582282 9930..9939 10 7 99 99 8 7 3.64 78.73 +Sample_543M DEL chr1:155716587-155719422 2.84 chr1 155718004 9961..9969 9 4 99 99 9 4 -3.20 37.21 +Sample_543M DEL chr2:97749324-97784254 34.93 chr2 97766789 18961..18971 11 45 99 99 19 11 -4.83 33.20 +Sample_543M DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 47 99 99 18 17 4.50 116.16 +Sample_543M DUP chr2:130949321-130956034 6.71 chr2 130952677 20175..20179 5 13 34 34 28 13 3.30 81.86 +Sample_543M DUP chr3:195451098-195456610 5.51 chr3 195453854 32798..32800 3 31 92 94 13 10 6.09 116.43 +Sample_543M DUP chr5:819640-825366 5.73 chr5 822503 37329..37330 2 41 42 42 8 5 6.34 111.08 +Sample_543M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 22 72 72 37 17 -3.98 78.88 +Sample_543M DUP chr6:168344621-168479839 135.22 chr6 168412230 48221..48247 27 7 99 99 6 45 3.60 74.25 +Sample_543M DUP chr7:76140974-76619686 478.71 chr7 76380330 51081..51095 15 20 98 99 16 9 3.08 66.28 +Sample_543M DUP chr7:102180462-102257205 76.74 chr7 102218833 52451..52456 6 19 99 99 37 19 4.21 65.80 +Sample_543M DUP chr7:142458406-142482397 23.99 chr7 142470401 54057..54064 8 4 99 99 5 10 3.36 84.44 +Sample_543M DEL chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 12 66 66 35 12 -4.53 25.03 +Sample_543M DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 5 99 99 4 18 6.97 123.42 +Sample_543M DEL chr12:9450377-9459910 9.53 chr12 9455143 81114..81125 12 15 99 99 15 20 -3.90 24.55 +Sample_543M DUP chr12:9577124-9586736 9.61 chr12 9581930 81139..81148 10 57 99 99 16 48 5.37 101.17 +Sample_543M DUP chr14:19377594-20404761 1027.17 chr14 19891177 90039..90047 9 7 98 99 15 8 3.65 61.37 +Sample_543M DEL chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 91 99 99 89 26 -5.56 16.74 +Sample_543M DEL chr15:23299681-23444098 144.42 chr15 23371889 94425..94438 14 76 99 99 14 39 -4.73 19.21 +Sample_543M DUP chr15:78207740-78214113 6.37 chr15 78210926 98003..98015 13 5 96 99 15 3 2.88 156.17 +Sample_543M DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 58 60 60 59 43 6.93 60.94 +Sample_543M DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 4 77 77 7 5 -3.60 62.35 +Sample_543M DUP chr16:55846815-55862883 16.07 chr16 55854849 103457..103464 8 13 99 99 16 13 3.46 68.76 +Sample_543M DUP chr16:74446671-74452196 5.53 chr16 74449433 105296..105298 3 5 98 99 17 5 6.33 135.04 +Sample_543M DUP chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 29 65 65 14 26 5.30 152.84 +Sample_543M DEL chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 36 99 99 21 5 -5.51 37.31 +Sample_543M DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 25 99 99 25 20 5.86 76.72 +Sample_543M DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 34 99 99 20 24 -6.25 33.44 +Sample_543M DEL chr19:50462617-50464429 1.81 chr19 50463523 127078..127081 4 15 42 42 14 0 -4.07 56.16 +Sample_543M DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 51 56 56 0 29 7.14 156.45 +Sample_543M DEL chr19:54724025-54725251 1.23 chr19 54724638 127861..127863 3 27 64 64 28 3 -5.34 25.88 +Sample_543M DUP chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 24 99 99 3 22 6.45 97.50 +Sample_543M DUP chr19:55105662-55107400 1.74 chr19 55106531 127980..127984 5 3 68 68 36 3 3.89 143.71 +Sample_543M DEL chr19:55327893-55361964 34.07 chr19 55344928 128026..128034 9 40 91 92 3 35 -3.05 17.32 +Sample_543M DEL chr20:23966304-23967282 0.98 chr20 23966793 129830..129833 4 7 37 37 11 7 -3.91 157.50 +Sample_543M DEL chr21:45959068-46012386 53.32 chr21 45985727 134150..134156 7 53 99 99 15 44 -5.09 299.69 +Sample_543M DUP chr22:16256332-16279301 22.97 chr22 16267816 134510..134512 3 48 99 99 48 26 7.66 89.94 +Sample_543M DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 10 30 30 10 24 4.39 105.70 +Sample_543M DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 80 99 99 36 5 7.65 78.53 +Sample_543M DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 4 99 99 5 5 3.75 56.22 +Sample_543M DUP chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 29 49 49 5 38 6.72 278.89 +Sample_543M DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 5 99 99 2 12 -5.69 136.14 +Sample_543M DUP chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 51 99 99 31 40 5.21 86.32 +Sample_543M DUP chr22:39427699-39448358 20.66 chr22 39438028 136965..136973 9 3 72 72 23 3 2.87 67.91 +Sample_543M DEL chr22:42898755-42950048 51.29 chr22 42924401 137451..137460 10 33 99 99 28 8 -5.09 20.66 +Sample_543M DEL chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 51 62 62 25 32 -5.48 8.83 +Sample_543P DEL chr1:12916941-12921764 4.82 chr1 12919352 1613..1616 4 15 56 56 8 7 -4.22 32.92 +Sample_543P DEL chr1:16952270-16972173 19.90 chr1 16962221 1964..1966 3 36 99 99 5 48 -7.21 82.24 +Sample_543P DUP chr1:17087450-17275421 187.97 chr1 17181435 1985..2005 21 4 99 99 4 4 3.28 93.80 +Sample_543P DUP chr2:233244896-233246077 1.18 chr2 233245486 23901..23904 4 23 78 78 19 22 4.72 81.95 +Sample_543P DEL chr3:48609434-48609604 0.17 chr3 48609519 27154..27155 2 35 39 39 18 6 -6.34 71.66 +Sample_543P DEL chr3:49724380-49724911 0.53 chr3 49724645 27608..27610 3 38 99 99 36 37 -7.63 153.07 +Sample_543P DEL chr5:140529839-140627799 97.96 chr5 140578819 40598..40611 14 2 39 39 4 2 -2.21 40.98 +Sample_543P DEL chr6:304628-351353 46.73 chr6 327990 42799..42805 7 6 99 99 4 6 -3.68 22.55 +Sample_543P DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 13 46 46 11 16 -3.58 48.34 +Sample_543P DUP chr7:76610139-76635092 24.95 chr7 76622615 51094..51099 6 4 79 79 52 3 3.60 56.46 +Sample_543P DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 27 99 99 22 4 -5.30 11.29 +Sample_543P DEL chr8:144894436-144895696 1.26 chr8 144895066 58933..58937 5 5 94 95 10 6 -4.32 74.88 +Sample_543P DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 28 32 32 15 14 -3.83 27.37 +Sample_543P DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 37 37 37 35 37 6.08 118.58 +Sample_543P DUP chr15:41857224-41865665 8.44 chr15 41861444 95374..95385 12 15 95 97 11 4 2.72 53.33 +Sample_543P DEL chr16:3074182-3077074 2.89 chr16 3075628 100439..100448 10 4 42 42 4 8 -2.53 84.45 +Sample_543P DEL chr17:18387189-18398258 11.07 chr17 18392723 109356..109362 7 15 69 69 14 12 -3.24 23.22 +Sample_543P DEL chr17:39190139-39411837 221.70 chr17 39300988 111310..111331 22 11 99 99 4 9 -2.94 66.94 +Sample_543P DEL chr19:13947101-13985825 38.73 chr19 13966463 121625..121629 5 8 32 32 23 3 -3.37 62.00 +Sample_543P DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 46 58 58 47 19 -7.07 35.42 +Sample_543P DUP chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 28 84 84 22 20 4.14 73.04 +Sample_543P DEL chr19:55417508-55417692 0.18 chr19 55417600 128042..128043 2 40 40 40 18 19 -6.43 87.45 +Sample_543P DEL chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 43 99 99 15 17 -6.56 146.23 +Sample_543P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 44 15 8.24 102.28 +Sample_543P DEL chr22:22989453-22989760 0.31 chr22 22989606 135221..135222 2 27 50 50 29 18 -6.80 81.58 +Sample_543P DEL chr22:50900634-50901367 0.73 chr22 50901000 138168..138170 3 9 38 38 9 30 -4.74 91.73 +Sample_691F DEL chr1:12851546-12976507 124.96 chr1 12914026 1602..1624 23 15 99 99 27 15 -3.23 15.65 +Sample_691F DEL chr1:16894474-17017789 123.32 chr1 16956131 1944..1969 26 9 99 99 9 5 -4.48 34.02 +Sample_691F DEL chr1:17085298-17090975 5.68 chr1 17088136 1980..1986 7 13 99 99 29 13 -3.97 49.36 +Sample_691F DUP chr1:17256619-17257892 1.27 chr1 17257255 1991..1994 4 38 40 40 18 20 3.97 84.65 +Sample_691F DUP chr1:36773371-36774076 0.71 chr1 36773723 4352..4355 4 19 43 43 29 9 4.04 84.94 +Sample_691F DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 49 99 99 22 25 5.82 66.30 +Sample_691F DEL chr8:11985367-12008698 23.33 chr8 11997032 55312..55314 3 26 34 34 11 7 -4.55 9.60 +Sample_691F DEL chr8:12286142-12291623 5.48 chr8 12288882 55321..55323 3 13 36 36 28 13 -4.50 6.77 +Sample_691F DUP chr10:46965715-46993563 27.85 chr10 46979639 66734..66738 5 53 99 99 40 3 4.90 74.09 +Sample_691F DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 18 99 99 23 4 6.00 57.12 +Sample_691F DEL chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 3 99 99 21 3 -3.32 9.96 +Sample_691F DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 50 73 73 23 29 7.71 75.28 +Sample_691F DEL chr12:132632178-132636189 4.01 chr12 132634183 87865..87872 8 7 38 38 14 6 -2.74 35.35 +Sample_691F DEL chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 7 30 30 27 7 -3.77 6.90 +Sample_691F DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 31 51 51 4 31 4.85 45.26 +Sample_691F DEL chr16:1278337-1280185 1.85 chr16 1279261 99710..99713 4 26 47 47 24 35 -4.09 8.41 +Sample_691F DUP chr16:3076680-3077074 0.40 chr16 3076877 100446..100448 3 39 81 81 57 6 5.82 129.85 +Sample_691F DEL chr16:74401963-74452196 50.23 chr16 74427079 105290..105298 9 7 99 99 6 16 -4.78 22.30 +Sample_691F DEL chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 7 69 69 8 10 -3.02 13.06 +Sample_691F DUP chr17:39202798-39411837 209.04 chr17 39307317 111312..111331 20 5 99 99 3 8 2.55 65.73 +Sample_691F DUP chr17:48269149-48271544 2.40 chr17 48270346 112940..112947 8 14 34 34 15 10 2.72 64.90 +Sample_691F DEL chr19:43679367-43709790 30.42 chr19 43694578 125401..125408 8 6 75 75 7 11 -3.07 11.22 +Sample_691F DEL chr19:54724398-54726959 2.56 chr19 54725678 127862..127865 4 45 47 47 32 30 -4.08 4.20 +Sample_691F DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 26 99 99 10 25 -4.87 19.46 +Sample_691F DUP chr19:55344174-55361964 17.79 chr19 55353069 128030..128034 5 37 38 38 12 17 3.45 28.78 +Sample_691F DEL chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 44 45 45 37 16 -6.60 74.14 +Sample_691F DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 25 37 37 20 9 -2.88 6.70 +Sample_691F DUP chr22:42538480-42564742 26.26 chr22 42551611 137436..137441 6 21 36 36 26 13 3.14 50.44 +Sample_691M DEL chr1:12851546-12976507 124.96 chr1 12914026 1602..1624 23 6 99 99 17 7 -3.31 13.86 +Sample_691M DEL chr1:16921426-17256702 335.28 chr1 17089064 1959..1991 33 2 60 60 4 5 -1.94 42.06 +Sample_691M DEL chr1:19600355-19612866 12.51 chr1 19606610 2361..2367 7 36 99 99 22 10 -3.96 12.54 +Sample_691M DEL chr12:8377306-8395542 18.24 chr12 8386424 80974..80978 5 27 31 31 5 27 -3.26 31.96 +Sample_691M DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 49 72 72 30 21 7.68 72.88 +Sample_691M DEL chr16:1279567-1291700 12.13 chr16 1285633 99712..99716 5 7 57 57 3 24 -3.73 26.10 +Sample_691M DUP chr16:3076680-3076917 0.24 chr16 3076798 100446..100447 2 51 51 51 26 29 6.86 131.09 +Sample_691M DEL chr16:28607104-28620649 13.55 chr16 28613876 102275..102281 7 12 45 45 13 3 -2.97 22.39 +Sample_691M DEL chr17:15635591-15646830 11.24 chr17 15641210 108932..108944 13 3 98 99 3 5 -3.79 12.51 +Sample_691M DUP chr19:38932989-38934901 1.91 chr19 38933945 124232..124235 4 3 60 60 8 4 4.33 55.88 +Sample_691M DEL chr19:54784816-54803978 19.16 chr19 54794397 127894..127900 7 15 99 99 15 23 -7.01 4.17 +Sample_691M DUP chr20:30457613-30458011 0.40 chr20 30457812 130032..130033 2 31 32 32 29 27 6.11 55.84 +Sample_691P DEL chr1:1451392-1460671 9.28 chr1 1456031 317..326 10 7 71 71 13 5 -2.76 25.56 +Sample_691P DEL chr1:16918654-17275421 356.77 chr1 17097037 1956..2005 50 16 99 99 4 16 -2.85 46.14 +Sample_691P DUP chr1:155183617-155185578 1.96 chr1 155184597 9806..9809 4 26 99 99 26 9 6.33 75.97 +Sample_691P DUP chr1:156785542-156813025 27.48 chr1 156799283 10298..10307 10 4 49 49 26 2 2.59 41.06 +Sample_691P DUP chr2:130807389-130878181 70.79 chr2 130842785 20145..20148 4 30 56 56 10 1 4.20 48.87 +Sample_691P DUP chr2:233243910-233246077 2.17 chr2 233244993 23898..23904 7 3 44 44 3 18 2.96 70.12 +Sample_691P DEL chr2:233271552-233274158 2.61 chr2 233272855 23907..23915 9 4 99 99 4 5 -3.29 37.02 +Sample_691P DUP chr3:48609434-48614352 4.92 chr3 48611893 27154..27178 25 13 99 99 16 16 2.28 66.38 +Sample_691P DUP chr3:48619139-48620086 0.95 chr3 48619612 27196..27200 5 29 99 99 6 31 4.81 88.46 +Sample_691P DUP chr3:49849303-49850171 0.87 chr3 49849737 27701..27704 4 24 79 79 28 3 4.68 107.57 +Sample_691P DUP chr3:50326878-50327903 1.03 chr3 50327390 27872..27876 5 29 80 80 4 4 4.06 77.26 +Sample_691P DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 41 99 99 6 6 -5.23 0.32 +Sample_691P DUP chr8:144920852-144922401 1.55 chr8 144921626 58960..58967 8 8 63 63 6 11 2.98 77.41 +Sample_691P DEL chr9:117085943-117088757 2.81 chr9 117087350 62580..62584 5 5 55 55 7 5 -3.68 13.10 +Sample_691P DUP chr10:46963840-47000567 36.73 chr10 46982203 66733..66739 7 9 99 99 9 10 3.94 61.06 +Sample_691P DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 50 99 99 41 37 6.63 55.77 +Sample_691P DUP chr11:64564281-64565136 0.86 chr11 64564708 75391..75396 6 8 99 99 26 8 3.96 84.59 +Sample_691P DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 29 92 92 49 19 -3.78 8.48 +Sample_691P DUP chr12:6458116-6458571 0.46 chr12 6458343 80443..80445 3 18 38 38 17 3 4.65 67.05 +Sample_691P DEL chr12:9447028-9451458 4.43 chr12 9449243 81112..81115 4 21 82 82 18 4 -4.75 15.57 +Sample_691P DEL chr12:9570288-9578716 8.43 chr12 9574502 81130..81142 13 11 50 50 27 12 -2.37 19.03 +Sample_691P DUP chr14:24031171-24033065 1.90 chr14 24032118 90659..90664 6 3 52 52 3 4 3.27 69.30 +Sample_691P DEL chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 22 41 41 7 24 -2.92 11.36 +Sample_691P DUP chr15:23308564-23444098 135.53 chr15 23376331 94427..94438 12 11 47 47 0 46 2.44 21.23 +Sample_691P DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 17 66 66 20 17 5.28 45.13 +Sample_691P DEL chr16:1278337-1280185 1.85 chr16 1279261 99710..99713 4 48 99 99 45 18 -5.87 7.46 +Sample_691P DUP chr16:3074182-3077281 3.10 chr16 3075731 100439..100449 11 19 93 95 20 14 2.83 79.32 +Sample_691P DUP chr16:29883508-29884064 0.56 chr16 29883786 102484..102486 3 8 47 47 7 29 4.96 75.38 +Sample_691P DUP chr16:88780544-88781334 0.79 chr16 88780939 106028..106031 4 25 37 37 6 25 3.92 64.71 +Sample_691P DUP chr19:39911391-39911753 0.36 chr19 39911572 124597..124599 3 18 96 98 15 21 6.30 101.46 +Sample_691P DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 20 99 99 14 20 -4.55 19.27 +Sample_691P DEL chr19:43680022-43709790 29.77 chr19 43694906 125402..125408 7 39 99 99 5 12 -3.76 10.62 +Sample_691P DUP chr19:55327893-55361964 34.07 chr19 55344928 128026..128034 9 7 58 58 4 34 2.77 25.09 +Sample_691P DEL chr21:45999564-46020655 21.09 chr21 46010109 134155..134157 3 15 31 31 3 16 -4.82 136.15 +Sample_691P DUP chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 17 52 52 17 15 3.27 21.45 +Sample_691P DUP chr22:21380094-21383733 3.64 chr22 21381913 135091..135095 5 34 61 61 19 3 3.79 54.57 +Sample_691P DUP chr22:50900376-50903558 3.18 chr22 50901967 138167..138175 9 14 82 82 13 10 3.00 70.04 +Sample_698F DEL chr1:14363-70008 55.65 chr1 42185 1..5 5 13 99 99 0 13 -4.58 15.66 +Sample_698F DEL chr1:12851546-12891264 39.72 chr1 12871405 1602..1609 8 33 99 99 39 30 -3.81 34.32 +Sample_698F DEL chr1:16918654-17090975 172.32 chr1 17004814 1956..1986 31 3 99 99 2 0 -3.91 71.10 +Sample_698F DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 5 85 99 0 7 4.07 94.40 +Sample_698F DUP chr2:114341230-114356605 15.38 chr2 114348917 19699..19707 9 24 86 86 21 16 3.04 81.19 +Sample_698F DEL chr2:233347128-233347318 0.19 chr2 233347223 23934..23935 2 37 37 37 15 5 -6.23 92.90 +Sample_698F DEL chr3:48607313-48609971 2.66 chr3 48608642 27146..27157 12 9 43 43 9 11 -2.39 65.23 +Sample_698F DUP chr3:195410623-195447954 37.33 chr3 195429288 32796..32797 2 21 34 34 16 29 6.24 83.32 +Sample_698F DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 36 97 99 5 34 4.99 56.82 +Sample_698F DUP chr8:11985367-12008698 23.33 chr8 11997032 55312..55314 3 30 33 33 3 17 4.47 57.37 +Sample_698F DEL chr10:135369284-135370660 1.38 chr10 135369972 70977..70980 4 7 85 85 28 5 -4.82 78.03 +Sample_698F DUP chr12:90587-149412 58.83 chr12 119999 79930..79932 3 46 47 47 11 44 4.93 69.24 +Sample_698F DUP chr12:9436253-9571525 135.27 chr12 9503889 81110..81131 22 6 99 99 38 6 3.40 53.58 +Sample_698F DEL chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 34 48 48 36 38 -3.66 9.69 +Sample_698F DEL chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 8 99 99 25 8 -3.11 19.71 +Sample_698F DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 96 99 99 49 55 9.33 59.13 +Sample_698F DEL chr16:3076680-3077074 0.40 chr16 3076877 100446..100448 3 24 51 51 25 6 -5.06 136.67 +Sample_698F DUP chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 45 62 62 21 6 7.22 117.94 +Sample_698F DUP chr17:39240459-39262738 22.28 chr17 39251598 111315..111317 3 22 71 71 13 12 5.57 116.02 +Sample_698F DUP chr17:39382900-39389705 6.81 chr17 39386302 111326..111328 3 21 53 53 10 4 5.06 109.11 +Sample_698F DEL chr19:55315346-55377877 62.53 chr19 55346611 128025..128035 11 3 63 63 4 3 -2.60 10.31 +Sample_698F DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 18 99 99 4 18 -3.92 8.47 +Sample_698F DEL chr22:24653965-24661490 7.53 chr22 24657727 135428..135431 4 3 42 42 10 4 -3.94 91.22 +Sample_698M DEL chr1:16895568-16902976 7.41 chr1 16899272 1945..1948 4 26 32 32 26 7 -3.83 16.77 +Sample_698M DEL chr1:16952270-16976914 24.64 chr1 16964592 1964..1968 5 68 99 99 5 42 -8.76 88.13 +Sample_698M DEL chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 18 99 99 11 0 -5.44 87.99 +Sample_698M DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 33 99 99 0 15 7.94 115.94 +Sample_698M DUP chr1:148560990-148932920 371.93 chr1 148746955 8607..8609 3 11 33 33 11 33 5.21 134.07 +Sample_698M DUP chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 7 76 76 7 5 3.10 75.06 +Sample_698M DEL chr3:195690171-195717150 26.98 chr3 195703660 32841..32852 12 3 99 99 3 7 -3.21 19.97 +Sample_698M DUP chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 79 99 99 27 28 5.24 74.58 +Sample_698M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 39 99 99 27 27 -4.66 48.07 +Sample_698M DUP chr7:74197282-74203048 5.77 chr7 74200165 50910..50912 3 4 37 37 6 7 4.51 88.66 +Sample_698M DUP chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 48 52 52 36 23 3.41 44.07 +Sample_698M DEL chr8:12043861-12250923 207.06 chr8 12147392 55316..55320 5 21 76 76 13 0 -4.20 30.31 +Sample_698M DEL chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 30 33 33 15 29 -3.84 16.36 +Sample_698M DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 8 99 99 77 8 -3.95 13.56 +Sample_698M DEL chr15:23444007-23444098 0.09 chr15 23444052 94438..94438 1 31 31 31 31 31 -10.00 26.65 +Sample_698M DUP chr15:78207740-78208927 1.19 chr15 78208333 98003..98006 4 5 54 54 24 5 4.24 139.64 +Sample_698M DEL chr16:1279191-1292554 13.36 chr16 1285872 99711..99717 7 5 59 60 13 0 -3.16 44.70 +Sample_698M DUP chr16:1306273-1308494 2.22 chr16 1307383 99718..99722 5 8 91 92 1 8 4.24 92.02 +Sample_698M DEL chr16:14988855-15125763 136.91 chr16 15057309 101197..101214 18 5 99 99 8 5 -3.63 20.43 +Sample_698M DUP chr16:74446671-74452196 5.53 chr16 74449433 105296..105298 3 18 37 37 19 17 4.64 87.14 +Sample_698M DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 8 91 92 7 33 -2.77 28.69 +Sample_698M DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 6 98 99 2 6 3.45 51.25 +Sample_698M DUP chr19:15763633-15807984 44.35 chr19 15785808 122093..122109 17 3 99 99 3 11 4.51 47.92 +Sample_698M DUP chr19:43348511-43441330 92.82 chr19 43394920 125376..125392 17 14 99 99 14 27 4.00 56.89 +Sample_698M DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 18 99 99 27 17 -4.49 1.72 +Sample_698M DEL chr19:55239077-55361964 122.89 chr19 55300520 128015..128034 20 3 66 99 22 14 -2.31 9.16 +Sample_698M DUP chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 13 99 99 24 8 4.00 194.74 +Sample_698M DUP chr22:25044121-25055114 10.99 chr22 25049617 135495..135500 6 2 99 99 11 2 3.84 124.60 +Sample_698P DEL chr1:12851546-12854642 3.10 chr1 12853094 1602..1604 3 8 31 31 8 9 -4.55 39.36 +Sample_698P DUP chr1:12918840-12939926 21.09 chr1 12929383 1614..1617 4 20 99 99 19 20 5.64 73.24 +Sample_698P DUP chr1:16895568-16946533 50.97 chr1 16921050 1945..1963 19 17 99 99 6 5 3.75 69.36 +Sample_698P DEL chr1:16954963-17084583 129.62 chr1 17019773 1965..1979 15 10 66 99 4 17 -3.64 42.43 +Sample_698P DEL chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 79 99 99 6 0 -7.29 61.40 +Sample_698P DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 4 99 99 0 4 5.30 78.27 +Sample_698P DUP chr1:144854165-144855883 1.72 chr1 144855024 8344..8346 3 29 40 40 5 22 4.76 96.18 +Sample_698P DEL chr1:148930405-149399229 468.82 chr1 149164817 8608..8613 6 51 99 99 49 66 -5.17 30.64 +Sample_698P DUP chr1:248436155-248525929 89.78 chr1 248481042 15079..15083 5 19 31 31 17 15 3.39 62.27 +Sample_698P DUP chr2:96688772-96690085 1.31 chr2 96689428 18716..18720 5 11 51 51 26 11 3.67 63.48 +Sample_698P DUP chr2:114341230-114384715 43.49 chr2 114362972 19699..19709 11 4 46 46 18 3 2.49 54.91 +Sample_698P DUP chr2:130806641-130899954 93.31 chr2 130853297 20144..20154 11 3 99 99 3 4 2.92 49.27 +Sample_698P DEL chr3:75470705-75484266 13.56 chr3 75477485 29262..29269 8 24 99 99 75 24 -6.44 33.89 +Sample_698P DUP chr3:195447753-195475935 28.18 chr3 195461844 32797..32802 6 44 98 99 8 4 4.48 61.72 +Sample_698P DUP chr3:195710983-195717150 6.17 chr3 195714066 32849..32852 4 6 75 75 4 7 4.51 51.79 +Sample_698P DUP chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 12 72 72 15 12 4.46 65.06 +Sample_698P DUP chr8:11985367-12291623 306.26 chr8 12138495 55312..55323 12 7 99 99 20 7 4.10 50.26 +Sample_698P DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 26 31 31 31 23 -3.00 10.70 +Sample_698P DEL chr15:22143113-22369516 226.40 chr15 22256314 94357..94363 7 4 59 59 2 6 -3.24 20.88 +Sample_698P DUP chr15:23261763-23312308 50.55 chr15 23287035 94422..94430 9 6 97 99 8 7 3.17 45.10 +Sample_698P DUP chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 13 71 71 5 9 5.54 123.18 +Sample_698P DUP chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 28 99 99 31 24 5.99 59.87 +Sample_698P DEL chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 73 99 99 5 6 -5.25 37.01 +Sample_698P DUP chr17:14095306-14140150 44.84 chr17 14117728 108884..108888 5 10 98 99 10 21 4.50 67.35 +Sample_698P DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 11 42 42 11 25 2.42 41.32 +Sample_698P DEL chr17:18390961-18398258 7.30 chr17 18394609 109357..109362 6 21 96 99 12 6 -3.90 14.72 +Sample_698P DUP chr19:50463394-50464429 1.04 chr19 50463911 127079..127081 3 5 33 33 5 2 4.56 61.54 +Sample_698P DUP chr21:45959068-46058370 99.30 chr21 46008719 134150..134161 12 9 99 99 12 5 3.81 147.27 +Sample_698P DEL chr22:20386517-20398336 11.82 chr22 20392426 134921..134925 5 21 30 30 5 18 -3.25 7.85 +Sample_698P DUP chr22:23637211-23656901 19.69 chr22 23647056 135258..135264 7 5 40 40 7 6 2.94 87.58 +Sample_698P DUP chr22:25040707-25055114 14.41 chr22 25047910 135492..135500 9 1 57 57 3 4 2.69 74.33 +Sample_703F DUP chr1:12853352-12943231 89.88 chr1 12898291 1603..1619 17 26 99 99 17 36 2.50 88.71 +Sample_703F DEL chr1:16894474-17275421 380.95 chr1 17084947 1944..2005 62 4 97 99 23 4 -4.15 88.07 +Sample_703F DUP chr1:21806544-21811392 4.85 chr1 21808968 2575..2577 3 9 50 50 6 17 4.87 49.17 +Sample_703F DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 15 95 95 36 13 3.85 75.29 +Sample_703F DEL chr1:161518801-161601158 82.36 chr1 161559979 11050..11060 11 2 76 76 2 21 -2.67 26.52 +Sample_703F DUP chr2:132290437-132290642 0.21 chr2 132290539 20265..20266 2 44 67 67 20 24 7.46 161.02 +Sample_703F DUP chr3:75470705-75477059 6.36 chr3 75473882 29262..29265 4 17 32 32 28 7 3.82 186.79 +Sample_703F DEL chr5:795720-825366 29.65 chr5 810543 37326..37330 5 46 98 99 19 32 -5.24 24.69 +Sample_703F DEL chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 23 52 52 23 33 -4.12 51.34 +Sample_703F DUP chr7:6851583-6864368 12.79 chr7 6857975 48985..48989 5 10 69 69 10 22 3.84 48.16 +Sample_703F DUP chr7:72476099-72649368 173.27 chr7 72562733 50674..50677 4 16 48 48 19 8 4.33 87.28 +Sample_703F DUP chr7:76610139-76682355 72.22 chr7 76646247 51094..51101 8 32 99 99 45 32 3.57 75.43 +Sample_703F DEL chr7:102114808-102246434 131.63 chr7 102180621 52449..52455 7 24 99 99 12 27 -3.79 27.35 +Sample_703F DEL chr7:143955790-144075959 120.17 chr7 144015874 54231..54237 7 5 99 99 29 4 -3.82 29.79 +Sample_703F DUP chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 19 89 89 3 19 3.44 64.11 +Sample_703F DUP chr8:7320229-7752292 432.06 chr8 7536260 55182..55185 4 8 99 99 8 26 6.45 92.57 +Sample_703F DUP chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 6 99 99 8 9 4.24 85.77 +Sample_703F DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 66 67 67 66 42 7.17 88.77 +Sample_703F DUP chr10:46918169-47756092 837.92 chr10 47337130 66730..66766 37 10 99 99 10 47 4.15 90.95 +Sample_703F DUP chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 62 99 99 4 27 5.27 122.47 +Sample_703F DEL chr13:24465671-24471125 5.46 chr13 24468398 88168..88171 4 9 34 34 16 9 -3.73 30.56 +Sample_703F DEL chr15:21134198-21134625 0.43 chr15 21134411 94353..94354 2 49 49 49 42 1 -6.49 0.51 +Sample_703F DUP chr15:21932514-22145802 213.29 chr15 22039158 94355..94359 5 8 99 99 0 53 5.60 88.58 +Sample_703F DUP chr15:22708983-22710019 1.04 chr15 22709501 94367..94369 3 51 99 99 43 28 7.51 72.61 +Sample_703F DUP chr16:2201570-2202886 1.32 chr16 2202228 100155..100158 4 23 42 42 23 17 4.04 142.52 +Sample_703F DUP chr16:3076680-3077501 0.82 chr16 3077090 100446..100450 5 5 54 54 7 6 3.69 198.10 +Sample_703F DUP chr16:55846815-55855433 8.62 chr16 55851124 103457..103461 5 37 50 50 21 27 3.66 80.80 +Sample_703F DUP chr16:74385938-74452196 66.26 chr16 74419067 105286..105298 13 19 99 99 15 22 4.25 102.88 +Sample_703F DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 45 90 90 6 6 -6.01 2.60 +Sample_703F DUP chr17:34499214-34757050 257.84 chr17 34628132 110586..110588 3 33 55 55 20 51 5.48 68.56 +Sample_703F DUP chr17:39261641-39412615 150.97 chr17 39337128 111317..111332 16 10 99 99 7 10 2.69 143.20 +Sample_703F DUP chr19:6375713-6387570 11.86 chr19 6381641 119698..119706 9 98 99 99 15 31 9.26 150.30 +Sample_703F DUP chr19:54724398-54726959 2.56 chr19 54725678 127862..127865 4 25 95 96 54 24 5.01 76.36 +Sample_703F DUP chr19:54784119-54803978 19.86 chr19 54794048 127892..127900 9 18 99 99 17 20 3.71 115.28 +Sample_703F DEL chr19:55294938-55361964 67.03 chr19 55328451 128024..128034 11 5 99 99 2 21 -4.87 2.01 +Sample_703F DUP chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 37 99 99 34 22 4.25 255.62 +Sample_703F DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 84 99 99 30 35 -7.70 47.49 +Sample_703F DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 52 99 99 11 10 -5.07 20.25 +Sample_703F DEL chr22:42898755-42950048 51.29 chr22 42924401 137451..137460 10 8 77 77 7 21 -2.83 41.01 +Sample_703M DEL chr1:12907236-12955703 48.47 chr1 12931469 1610..1622 13 9 91 99 9 36 -3.36 35.30 +Sample_703M DEL chr1:16913545-16955145 41.60 chr1 16934345 1952..1965 14 39 99 99 9 0 -3.80 115.58 +Sample_703M DEL chr1:17017713-17034573 16.86 chr1 17026143 1969..1976 8 16 99 99 2 4 -4.12 56.19 +Sample_703M DUP chr1:17086647-17087597 0.95 chr1 17087122 1984..1985 2 30 34 34 9 10 6.15 263.23 +Sample_703M DEL chr1:36773371-36773810 0.44 chr1 36773590 4352..4354 3 6 68 68 16 6 -5.49 162.95 +Sample_703M DUP chr1:78715868-79387471 671.60 chr1 79051669 6754..6766 13 7 99 99 2 19 3.03 38.35 +Sample_703M DEL chr1:161560934-161601158 40.23 chr1 161581046 11054..11060 7 3 68 68 7 3 -3.18 27.16 +Sample_703M DUP chr2:114352946-114358421 5.48 chr2 114355683 19702..19708 7 9 95 96 9 9 3.51 125.02 +Sample_703M DEL chr2:130897464-130897669 0.21 chr2 130897566 20150..20151 2 44 68 68 31 11 -7.49 59.68 +Sample_703M DUP chr2:132290162-132290642 0.48 chr2 132290402 20264..20266 3 7 44 44 13 3 4.82 142.90 +Sample_703M DEL chr3:49723746-49725330 1.58 chr3 49724538 27606..27612 7 5 39 39 12 3 -2.90 204.46 +Sample_703M DUP chr5:837480-878602 41.12 chr5 858041 37332..37342 11 7 98 99 7 24 2.92 97.40 +Sample_703M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 56 95 98 34 13 -4.37 78.40 +Sample_703M DUP chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 30 30 30 3 25 5.89 158.90 +Sample_703M DEL chr7:102191679-102257205 65.53 chr7 102224442 52453..52456 4 3 58 58 7 3 -4.21 22.64 +Sample_703M DUP chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 5 53 53 5 20 4.11 91.78 +Sample_703M DUP chr8:7153153-7217854 64.70 chr8 7185503 55171..55176 6 5 65 65 21 3 3.52 66.07 +Sample_703M DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 77 99 99 76 33 8.72 110.19 +Sample_703M DEL chr10:135368855-135370326 1.47 chr10 135369590 70976..70979 4 4 34 34 3 5 -3.80 144.76 +Sample_703M DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 99 99 99 89 0 -7.65 4.25 +Sample_703M DUP chr12:147946-149412 1.47 chr12 148679 79931..79932 2 53 82 82 0 41 7.86 155.61 +Sample_703M DEL chr15:20776609-21134625 358.02 chr15 20955617 94350..94354 5 11 73 73 10 38 -4.23 9.29 +Sample_703M DEL chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 26 99 99 59 11 -4.12 33.49 +Sample_703M DUP chr15:23260811-23311838 51.03 chr15 23286324 94420..94429 10 17 99 99 17 17 3.83 91.00 +Sample_703M DUP chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 17 99 99 30 13 4.52 90.13 +Sample_703M DEL chr15:75562173-75586172 24.00 chr15 75574172 97822..97827 6 5 99 99 9 3 -4.06 6.24 +Sample_703M DEL chr15:78207982-78208271 0.29 chr15 78208126 98004..98005 2 52 55 55 12 46 -6.98 211.50 +Sample_703M DUP chr16:1279191-1290729 11.54 chr16 1284960 99711..99714 4 16 99 99 6 13 5.43 107.19 +Sample_703M DUP chr16:55844429-55857595 13.17 chr16 55851012 103455..103462 8 4 76 76 4 10 3.11 66.34 +Sample_703M DUP chr16:74446671-74447574 0.90 chr16 74447122 105296..105297 2 80 98 99 42 5 8.77 190.75 +Sample_703M DUP chr17:18291533-18430160 138.63 chr17 18360846 109352..109365 14 13 98 99 24 13 3.48 76.31 +Sample_703M DEL chr17:20354794-20358711 3.92 chr17 20356752 109566..109569 4 9 98 99 9 4 -6.32 3.73 +Sample_703M DEL chr17:48269149-48270054 0.91 chr17 48269601 112940..112943 4 9 41 41 9 35 -4.00 108.21 +Sample_703M DUP chr19:1388832-1391164 2.33 chr19 1389998 118541..118543 3 29 38 38 12 30 4.73 137.63 +Sample_703M DUP chr19:6375713-6387570 11.86 chr19 6381641 119698..119706 9 87 99 99 14 24 8.95 163.09 +Sample_703M DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 9 51 51 36 9 -3.68 24.45 +Sample_703M DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 46 99 99 22 18 8.18 123.43 +Sample_703M DEL chr19:54745452-54746724 1.27 chr19 54746088 127866..127869 4 33 99 99 33 21 -5.73 27.73 +Sample_703M DEL chr19:55105113-55105743 0.63 chr19 55105428 127979..127980 2 12 36 36 10 7 -6.22 112.09 +Sample_703M DEL chr19:55315346-55361964 46.62 chr19 55338655 128025..128034 10 54 99 99 12 20 -5.42 0.40 +Sample_703M DEL chr21:45959068-46012386 53.32 chr21 45985727 134150..134156 7 28 48 48 9 40 -3.05 317.29 +Sample_703M DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 81 99 99 19 11 -7.42 40.05 +Sample_703M DEL chr22:20383731-20393604 9.87 chr22 20388667 134919..134923 5 8 33 33 32 8 -3.39 24.57 +Sample_703M DEL chr22:22985163-22989508 4.35 chr22 22987335 135218..135221 4 39 95 96 5 19 -5.04 98.20 +Sample_703M DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 4 99 99 4 15 4.67 66.48 +Sample_703M DUP chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 24 99 99 12 31 4.05 195.92 +Sample_703P DEL chr1:1633047-1677431 44.38 chr1 1655239 369..382 14 5 93 93 5 12 -2.54 14.55 +Sample_703P DUP chr1:16348486-16359751 11.27 chr1 16354118 1819..1836 18 31 99 99 18 9 4.17 59.82 +Sample_703P DEL chr1:16918342-17023419 105.08 chr1 16970880 1955..1971 17 7 99 99 5 6 -4.26 72.83 +Sample_703P DEL chr1:17084437-17085663 1.23 chr1 17085050 1979..1981 3 32 94 94 12 10 -6.17 95.40 +Sample_703P DEL chr1:17086647-17256842 170.20 chr1 17171744 1984..1992 9 36 99 99 11 6 -4.01 75.00 +Sample_703P DUP chr2:130897464-130897669 0.21 chr2 130897566 20150..20151 2 50 50 50 8 10 6.78 92.49 +Sample_703P DEL chr5:795720-825366 29.65 chr5 810543 37326..37330 5 13 53 53 13 22 -3.71 18.47 +Sample_703P DEL chr5:140220907-140238166 17.26 chr5 140229536 40585..40587 3 39 42 42 5 6 -4.73 30.76 +Sample_703P DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 31 99 99 14 30 -5.48 10.64 +Sample_703P DEL chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 45 76 76 29 12 -3.72 10.36 +Sample_703P DUP chr8:11985367-12044126 58.76 chr8 12014746 55312..55316 5 42 87 88 13 15 4.29 70.70 +Sample_703P DEL chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 5 36 36 15 5 -3.93 12.33 +Sample_703P DUP chr9:33384949-33402517 17.57 chr9 33393733 60082..60089 8 25 99 99 18 29 4.47 65.37 +Sample_703P DUP chr10:46958528-47756092 797.57 chr10 47357310 66732..66766 35 5 99 99 5 12 3.99 61.36 +Sample_703P DUP chr10:135368855-135381779 12.93 chr10 135375317 70976..70987 12 14 99 99 8 50 3.45 72.96 +Sample_703P DUP chr11:5274421-5276011 1.59 chr11 5275216 71922..71924 3 8 62 62 28 7 5.27 64.21 +Sample_703P DUP chr15:22014420-22145802 131.38 chr15 22080111 94356..94359 4 60 99 99 17 32 6.13 61.05 +Sample_703P DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 42 98 99 27 3 -6.32 99.03 +Sample_703P DEL chr16:1279191-1291700 12.51 chr16 1285445 99711..99716 6 15 37 37 11 21 -3.15 39.20 +Sample_703P DUP chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 11 34 34 11 34 3.89 67.77 +Sample_703P DUP chr17:16675291-16736147 60.86 chr17 16705719 109039..109050 12 10 98 99 3 36 3.99 55.72 +Sample_703P DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 28 98 99 15 21 -3.81 15.93 +Sample_703P DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 24 38 38 16 5 -4.71 2.29 +Sample_703P DEL chr17:39253236-39412615 159.38 chr17 39332925 111316..111332 17 8 99 99 2 8 -2.77 70.80 +Sample_703P DEL chr19:39735428-39759869 24.44 chr19 39747648 124534..124537 4 31 57 57 32 30 -4.35 77.19 +Sample_703P DUP chr19:40389652-40406060 16.41 chr19 40397856 124714..124720 7 7 99 99 11 7 3.71 56.54 +Sample_703P DUP chr19:54724398-54746186 21.79 chr19 54735292 127862..127867 6 30 99 99 10 5 5.03 55.65 +Sample_703P DUP chr19:55247287-55267601 20.32 chr19 55257444 128016..128022 7 12 91 92 8 2 3.45 36.90 +Sample_703P DEL chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 55 99 99 11 15 -5.40 133.16 +Sample_703P DEL chr22:23651611-23654023 2.41 chr22 23652817 135259..135261 3 5 43 43 5 3 -4.75 71.01 +Sample_703P DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 13 99 99 4 13 -5.36 0.21 +Sample_703P DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 9 99 99 9 13 -4.86 80.61 +Sample_703P DEL chr22:50017826-50018329 0.50 chr22 50018077 137887..137888 2 43 65 65 65 18 -7.39 188.97 +Sample_703P DEL chr22:50900225-50901367 1.14 chr22 50900796 138166..138170 5 18 47 47 14 16 -3.61 77.03 +Sample_756F DUP chr1:14970-17742 2.77 chr1 16356 2..4 3 27 32 32 32 27 4.46 92.44 +Sample_756F DUP chr1:1451392-1454370 2.98 chr1 1452881 317..319 3 13 39 39 11 15 4.76 106.12 +Sample_756F DEL chr1:1623888-1670496 46.61 chr1 1647192 368..381 14 4 99 99 4 12 -2.73 28.21 +Sample_756F DUP chr1:12853352-12958094 104.74 chr1 12905723 1603..1623 21 7 96 96 4 17 2.23 66.11 +Sample_756F DEL chr1:16383364-16385212 1.85 chr1 16384288 1857..1858 2 22 43 43 5 15 -6.48 69.67 +Sample_756F DUP chr1:16952270-16975287 23.02 chr1 16963778 1964..1967 4 20 99 99 18 20 5.28 233.43 +Sample_756F DEL chr1:17085561-17275421 189.86 chr1 17180491 1981..2005 25 2 99 99 9 2 -2.68 104.73 +Sample_756F DUP chr1:148930405-149399229 468.82 chr1 149164817 8608..8613 6 36 99 99 29 54 4.69 126.72 +Sample_756F DEL chr1:161559352-161601158 41.81 chr1 161580255 11053..11060 8 7 91 91 4 21 -3.22 21.91 +Sample_756F DUP chr7:74152387-74306965 154.58 chr7 74229676 50905..50917 13 5 99 99 5 33 5.32 91.52 +Sample_756F DEL chr7:74573056-75044301 471.25 chr7 74808678 50924..50929 6 11 99 99 9 19 -4.70 33.45 +Sample_756F DUP chr7:76121470-76126794 5.33 chr7 76124132 51074..51075 2 17 42 42 19 17 6.45 72.58 +Sample_756F DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 83 99 99 18 4 -8.72 0.00 +Sample_756F DEL chr7:102114808-102246434 131.63 chr7 102180621 52449..52455 7 5 34 34 16 5 -2.93 30.98 +Sample_756F DUP chr7:143955790-144070377 114.59 chr7 144013083 54231..54236 6 15 72 72 35 28 3.66 63.78 +Sample_756F DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 37 99 99 8 9 -6.34 16.37 +Sample_756F DUP chr8:12245467-12250923 5.46 chr8 12248195 55318..55320 3 70 99 99 22 53 8.31 89.68 +Sample_756F DUP chr9:15909-179075 163.17 chr9 97492 59397..59399 3 27 99 99 65 22 7.06 78.36 +Sample_756F DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 17 45 45 17 16 -4.09 38.85 +Sample_756F DUP chr9:141069815-141071884 2.07 chr9 141070849 65438..65440 3 77 99 99 20 7 9.17 182.50 +Sample_756F DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 95 99 99 25 27 9.50 189.19 +Sample_756F DEL chr10:135369284-135371718 2.44 chr10 135370501 70977..70982 6 8 49 49 4 6 -3.26 96.89 +Sample_756F DEL chr11:71502785-71507212 4.43 chr11 71504998 76832..76834 3 46 60 60 20 4 -5.24 115.89 +Sample_756F DEL chr12:87984-149412 61.43 chr12 118698 79925..79932 8 54 99 99 95 4 -5.65 22.78 +Sample_756F DUP chr12:9447028-9453842 6.82 chr12 9450435 81112..81117 6 11 82 82 11 17 3.72 85.65 +Sample_756F DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 50 73 73 37 11 -7.69 57.50 +Sample_756F DEL chr15:20743914-20776700 32.79 chr15 20760307 94345..94350 6 25 99 99 34 25 -4.14 14.17 +Sample_756F DUP chr15:21932514-22145802 213.29 chr15 22039158 94355..94359 5 17 90 91 6 56 4.37 74.71 +Sample_756F DUP chr15:23299915-23444098 144.18 chr15 23372006 94426..94438 13 14 99 99 13 23 3.05 61.82 +Sample_756F DEL chr15:25474114-25477557 3.44 chr15 25475835 94487..94489 3 12 83 83 5 22 -5.87 20.89 +Sample_756F DEL chr15:78207982-78208271 0.29 chr15 78208126 98004..98005 2 82 89 90 6 44 -8.29 181.41 +Sample_756F DEL chr16:2155323-2162964 7.64 chr16 2159143 100136..100144 9 37 94 95 7 28 -3.10 50.21 +Sample_756F DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 17 41 41 16 17 -4.70 22.30 +Sample_756F DEL chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 63 66 66 15 20 -7.36 56.69 +Sample_756F DEL chr16:74446671-74452196 5.53 chr16 74449433 105296..105298 3 9 89 90 38 9 -5.96 73.97 +Sample_756F DUP chr17:14095306-14140150 44.84 chr17 14117728 108884..108888 5 12 98 99 9 20 5.08 124.45 +Sample_756F DEL chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 13 30 30 8 7 -3.77 47.20 +Sample_756F DEL chr17:16701556-16736147 34.59 chr17 16718851 109044..109050 7 4 98 99 5 10 -4.06 49.30 +Sample_756F DUP chr17:18392255-18430160 37.91 chr17 18411207 109358..109365 8 9 43 43 8 12 2.76 60.46 +Sample_756F DUP chr17:39240459-39254375 13.92 chr17 39247417 111315..111316 2 41 42 42 26 4 6.39 160.43 +Sample_756F DUP chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 34 57 57 6 24 5.17 141.37 +Sample_756F DUP chr17:40766278-40811964 45.69 chr17 40789121 111749..111753 5 27 77 77 30 13 4.12 104.35 +Sample_756F DEL chr17:79768701-79769204 0.50 chr17 79768952 115982..115984 3 32 99 99 22 7 -7.88 89.04 +Sample_756F DEL chr19:39759157-39759869 0.71 chr19 39759513 124535..124537 3 17 63 63 20 20 -5.40 98.04 +Sample_756F DEL chr19:43708038-43763287 55.25 chr19 43735662 125407..125410 4 16 31 31 16 27 -3.87 30.06 +Sample_756F DEL chr19:50463394-50464429 1.04 chr19 50463911 127079..127081 3 5 52 52 22 0 -5.11 57.30 +Sample_756F DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 58 59 59 2 27 7.20 133.75 +Sample_756F DUP chr19:54722514-54726959 4.45 chr19 54724736 127859..127865 7 21 99 99 21 36 7.08 97.82 +Sample_756F DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 45 99 99 39 34 -6.54 54.07 +Sample_756F DEL chr19:55247287-55290114 42.83 chr19 55268700 128016..128023 8 7 99 99 20 3 -4.40 3.08 +Sample_756F DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 64 99 99 23 44 6.79 121.60 +Sample_756F DUP chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 41 97 98 36 8 3.52 59.29 +Sample_756F DUP chr22:24342269-24384284 42.02 chr22 24363276 135354..135361 8 11 73 73 15 3 3.07 57.74 +Sample_756F DEL chr22:42538480-42538881 0.40 chr22 42538680 137436..137437 2 57 58 58 21 25 -7.10 132.21 +Sample_756F DUP chrX:103217200-103294971 77.77 chrX 103256085 140819..140821 3 31 99 99 24 32 6.69 72.15 +Sample_756M DEL chr1:12851546-12921764 70.22 chr1 12886655 1602..1616 15 25 99 99 8 12 -2.90 42.71 +Sample_756M DEL chr1:16918654-16921156 2.50 chr1 16919905 1956..1958 3 59 99 99 39 24 -6.45 86.13 +Sample_756M DEL chr1:17085561-17087597 2.04 chr1 17086579 1981..1985 5 59 99 99 15 8 -4.90 39.38 +Sample_756M DUP chr2:128387220-128394203 6.98 chr2 128390711 20038..20048 11 2 98 99 2 17 2.85 50.44 +Sample_756M DUP chr3:52552328-52556246 3.92 chr3 52554287 28423..28436 14 8 56 56 7 14 2.34 48.13 +Sample_756M DUP chr3:195447753-195475935 28.18 chr3 195461844 32797..32802 6 4 81 81 9 5 3.69 61.03 +Sample_756M DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 36 84 84 29 37 -4.16 38.54 +Sample_756M DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 32 44 44 18 12 -4.02 16.22 +Sample_756M DUP chr8:145736374-145738154 1.78 chr8 145737264 59313..59319 7 11 63 63 3 13 3.17 50.02 +Sample_756M DUP chr10:47658234-47680438 22.20 chr10 47669336 66745..66759 15 2 73 73 3 6 2.36 46.53 +Sample_756M DUP chr14:104565190-104575652 10.46 chr14 104570421 94107..94114 8 18 35 35 12 12 2.73 46.07 +Sample_756M DUP chr16:69985164-69997887 12.72 chr16 69991525 104857..104860 4 14 60 60 8 20 4.33 40.10 +Sample_756M DUP chr16:88780055-88781514 1.46 chr16 88780784 106027..106032 6 27 98 99 24 23 4.10 52.16 +Sample_756M DEL chr17:39261641-39504891 243.25 chr17 39383266 111317..111337 21 7 99 99 13 6 -2.88 42.67 +Sample_756M DEL chr17:40765665-40766675 1.01 chr17 40766170 111747..111750 4 10 51 51 9 7 -4.19 46.46 +Sample_756M DEL chr19:43699147-43763287 64.14 chr19 43731217 125406..125410 5 6 76 76 2 21 -4.04 7.18 +Sample_756M DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 13 99 99 4 16 -4.08 11.50 +Sample_756M DUP chr22:42905034-42952594 47.56 chr22 42928814 137453..137461 9 9 80 81 13 11 3.01 50.96 +Sample_756M DUP chrX:153049207-153050628 1.42 chrX 153049917 141889..141894 6 8 53 53 8 22 3.34 64.12 +Sample_756P DEL chr1:16913545-17090975 177.43 chr1 17002260 1952..1986 35 3 99 99 15 0 -3.21 119.35 +Sample_756P DUP chr1:17248445-17275019 26.57 chr1 17261732 1987..2004 18 16 99 99 0 3 3.33 126.48 +Sample_756P DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 11 69 69 28 11 3.51 72.73 +Sample_756P DEL chr1:144994591-145209436 214.85 chr1 145102013 8385..8393 9 14 36 36 15 17 -2.68 98.14 +Sample_756P DEL chr1:148930405-149399229 468.82 chr1 149164817 8608..8613 6 29 99 99 37 28 -4.64 70.66 +Sample_756P DUP chr2:114346127-114353780 7.65 chr2 114349953 19700..19704 5 20 77 77 1 8 4.14 83.24 +Sample_756P DUP chr3:48604093-48622202 18.11 chr3 48613147 27135..27210 76 3 98 99 6 4 2.43 123.90 +Sample_756P DUP chr3:49719781-49723165 3.38 chr3 49721473 27591..27603 13 15 53 53 9 4 2.37 115.52 +Sample_756P DUP chr3:75470705-75480065 9.36 chr3 75475385 29262..29267 6 13 58 58 26 9 3.40 144.30 +Sample_756P DUP chr3:195392937-195453443 60.51 chr3 195423190 32791..32799 9 8 82 82 6 31 3.02 87.00 +Sample_756P DEL chr5:140474237-140627799 153.56 chr5 140551018 40594..40611 18 8 94 95 4 8 -2.33 73.24 +Sample_756P DUP chr7:74191613-74306965 115.35 chr7 74249289 50908..50917 10 28 99 99 5 37 4.00 106.25 +Sample_756P DEL chr7:74573056-74988678 415.62 chr7 74780867 50924..50928 5 17 99 99 12 2 -5.38 37.54 +Sample_756P DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 38 80 80 21 19 -4.73 31.89 +Sample_756P DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 93 99 99 92 34 8.75 99.78 +Sample_756P DEL chr10:47700835-47756732 55.90 chr10 47728783 66763..66767 5 37 71 71 18 38 -3.92 61.53 +Sample_756P DUP chr11:72398733-72410597 11.87 chr11 72404665 76998..77013 16 2 75 75 11 2 2.32 98.69 +Sample_756P DUP chr12:9570288-9578420 8.13 chr12 9574354 81130..81141 12 18 43 43 37 16 2.39 73.85 +Sample_756P DUP chr15:75557463-75557765 0.30 chr15 75557614 97820..97821 2 49 50 50 16 4 6.65 83.76 +Sample_756P DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 37 99 99 29 37 7.51 110.51 +Sample_756P DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 7 98 99 26 7 3.14 70.50 +Sample_756P DEL chr19:50463394-50464429 1.04 chr19 50463911 127079..127081 3 38 94 95 18 0 -6.26 48.95 +Sample_756P DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 72 74 74 0 20 7.80 155.36 +Sample_756P DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 10 66 66 9 14 -3.90 2.39 +Sample_756P DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 89 99 99 18 37 -8.85 0.50 +Sample_756P DEL chr19:55341383-55361964 20.58 chr19 55351673 128028..128034 7 23 99 99 11 25 -4.60 0.28 +Sample_756P DEL chr21:45959068-46048294 89.23 chr21 46003681 134150..134160 11 19 99 99 11 10 -3.49 208.17 +Sample_756P DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 43 99 99 19 49 7.24 136.46 +Sample_756P DUP chr22:20383731-20461786 78.06 chr22 20422758 134919..134926 8 9 99 99 33 9 8.36 120.61 +Sample_756P DEL chr22:42905034-42910310 5.28 chr22 42907672 137453..137457 5 3 46 46 3 4 -3.52 54.89 +Sample_756P DUP chrX:48837627-48838284 0.66 chrX 48837955 139394..139397 4 6 57 57 7 12 4.30 81.45 +Sample_756P DUP chrX:148626914-148628854 1.94 chrX 148627884 141596..141598 3 3 58 58 20 3 5.05 70.60 +Sample_772F DUP chr1:16975251-17090975 115.72 chr1 17033113 1967..1986 20 14 99 99 34 14 4.15 126.90 +Sample_772F DEL chr2:240981231-240985489 4.26 chr2 240983360 24411..24412 2 28 43 43 17 26 -6.31 84.27 +Sample_772F DEL chr3:48610946-48611323 0.38 chr3 48611134 27163..27165 3 20 38 38 20 20 -4.76 124.03 +Sample_772F DEL chr3:49723746-49724911 1.17 chr3 49724328 27606..27610 5 51 97 99 5 18 -4.44 182.11 +Sample_772F DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 5 98 99 4 10 -3.27 38.23 +Sample_772F DEL chr5:180375355-180431762 56.41 chr5 180403558 42756..42763 8 9 99 99 4 8 -3.63 12.81 +Sample_772F DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 49 99 99 15 30 -4.72 60.49 +Sample_772F DUP chr7:76111825-76126794 14.97 chr7 76119309 51073..51075 3 6 43 43 7 11 4.85 83.11 +Sample_772F DUP chr7:102191679-102257205 65.53 chr7 102224442 52453..52456 4 7 45 45 3 7 3.95 58.38 +Sample_772F DEL chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 8 99 99 20 8 -3.60 34.16 +Sample_772F DUP chr10:46918169-47701446 783.28 chr10 47309807 66730..66764 35 7 99 99 7 9 3.83 76.69 +Sample_772F DEL chr10:81315609-81320163 4.55 chr10 81317886 68058..68063 6 18 99 99 28 18 -4.06 25.59 +Sample_772F DEL chr12:87984-149412 61.43 chr12 118698 79925..79932 8 44 99 99 74 13 -4.39 28.91 +Sample_772F DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 45 99 99 17 21 7.76 110.38 +Sample_772F DUP chr12:9447413-9456803 9.39 chr12 9452108 81113..81121 9 29 54 54 4 23 2.75 55.36 +Sample_772F DUP chr15:23299915-23443575 143.66 chr15 23371745 94426..94437 12 30 99 99 30 32 3.95 53.46 +Sample_772F DUP chr15:41853325-41871526 18.20 chr15 41862425 95370..95387 18 22 99 99 48 28 3.66 69.49 +Sample_772F DEL chr16:1279191-1291700 12.51 chr16 1285445 99711..99716 6 11 63 63 10 10 -3.48 61.86 +Sample_772F DUP chr16:18554939-18604038 49.10 chr16 18579488 101385..101392 8 7 99 99 4 24 4.05 64.23 +Sample_772F DEL chr16:28608318-28621357 13.04 chr16 28614837 102276..102282 7 11 68 68 15 7 -3.23 48.39 +Sample_772F DUP chr16:70177413-70220796 43.38 chr16 70199104 104891..104898 8 34 99 99 28 14 3.46 61.34 +Sample_772F DUP chr16:74446671-74447574 0.90 chr16 74447122 105296..105297 2 58 58 58 37 25 7.10 152.24 +Sample_772F DEL chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 84 98 99 19 38 -8.51 32.24 +Sample_772F DUP chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 8 98 99 21 8 4.33 76.29 +Sample_772F DUP chr17:20406116-20407811 1.70 chr17 20406963 109575..109577 3 7 32 32 3 7 4.31 84.00 +Sample_772F DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 6 98 99 5 26 4.15 78.71 +Sample_772F DEL chr17:43697712-44116052 418.34 chr17 43906882 112458..112480 23 32 99 99 2 9 -2.56 13.76 +Sample_772F DUP chr19:40391998-40398510 6.51 chr19 40395254 124715..124718 4 58 99 99 7 26 7.16 106.76 +Sample_772F DUP chr19:43244473-43359870 115.40 chr19 43302171 125370..125379 10 7 99 99 7 42 4.17 76.14 +Sample_772F DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 91 99 99 8 21 -9.24 44.50 +Sample_772F DEL chr19:54746371-54756266 9.90 chr19 54751318 127868..127872 5 8 30 30 4 8 -3.32 34.25 +Sample_772F DUP chr19:55239077-55361964 122.89 chr19 55300520 128015..128034 20 12 99 99 9 12 3.18 41.30 +Sample_772F DEL chr21:45959068-46074576 115.51 chr21 46016822 134150..134163 14 7 99 99 12 6 -4.74 217.75 +Sample_772F DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 24 20 7.86 125.74 +Sample_772F DEL chr22:25044121-25045989 1.87 chr22 25045055 135495..135498 4 12 99 99 9 14 -5.45 145.46 +Sample_772F DUP chr22:42522502-42526883 4.38 chr22 42524692 137422..137430 9 24 99 99 19 23 6.63 127.21 +Sample_772F DUP chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 70 99 99 18 36 6.46 62.81 +Sample_772M DUP chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 6 96 96 24 6 3.23 31.12 +Sample_772M DEL chr1:25611064-25629950 18.89 chr1 25620507 3041..3045 5 35 37 37 16 10 -3.47 0.13 +Sample_772M DEL chr3:49849303-49850171 0.87 chr3 49849737 27701..27704 4 27 33 33 27 23 -3.86 30.61 +Sample_772M DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 6 99 99 6 29 7.51 38.42 +Sample_772M DUP chr19:43258385-43373186 114.80 chr19 43315785 125371..125380 10 7 95 96 14 1 2.96 16.69 +Sample_772M DEL chr22:50017826-50018584 0.76 chr22 50018205 137887..137889 3 16 47 47 47 16 -4.96 35.79 +Sample_772P DUP chr1:16921426-17090975 169.55 chr1 17006200 1959..1986 28 10 99 99 5 10 4.06 109.71 +Sample_772P DEL chr3:49714042-49714457 0.42 chr3 49714249 27581..27583 3 15 34 34 34 14 -4.65 109.08 +Sample_772P DEL chr3:49723746-49724911 1.17 chr3 49724328 27606..27610 5 31 99 99 22 16 -4.74 143.51 +Sample_772P DUP chr7:102180462-102257205 76.74 chr7 102218833 52451..52456 6 5 85 85 27 5 3.71 44.00 +Sample_772P DEL chr8:7153153-7320381 167.23 chr8 7236767 55171..55182 12 9 91 91 10 4 -2.70 16.75 +Sample_772P DEL chr8:11979496-12044126 64.63 chr8 12011811 55311..55316 6 7 92 93 7 3 -3.86 33.12 +Sample_772P DEL chr8:12286142-12291623 5.48 chr8 12288882 55321..55323 3 20 40 40 35 20 -4.61 15.52 +Sample_772P DUP chr10:46963840-47747132 783.29 chr10 47355486 66733..66765 33 6 99 99 5 9 3.46 65.28 +Sample_772P DEL chr10:81315609-81320163 4.55 chr10 81317886 68058..68063 6 13 88 88 14 19 -3.73 20.71 +Sample_772P DUP chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 33 99 99 33 31 5.08 78.93 +Sample_772P DUP chr12:9447028-9458353 11.33 chr12 9452690 81112..81122 11 9 99 99 18 9 3.83 55.97 +Sample_772P DUP chr15:20771427-22414393 1642.97 chr15 21592910 94346..94366 21 18 99 99 42 18 4.60 56.44 +Sample_772P DUP chr15:23443500-23444098 0.60 chr15 23443799 94437..94438 2 49 49 49 3 41 6.38 98.19 +Sample_772P DUP chr15:41860415-41871526 11.11 chr15 41865970 95376..95387 12 7 83 84 1 8 2.57 56.03 +Sample_772P DEL chr16:3076517-3077074 0.56 chr16 3076795 100445..100448 4 5 57 57 3 33 -4.26 123.45 +Sample_772P DUP chr17:40703984-40707224 3.24 chr17 40705604 111703..111708 6 2 80 80 4 5 3.63 58.50 +Sample_772P DEL chr19:39911589-39911753 0.17 chr19 39911671 124598..124599 2 40 40 40 4 22 -6.35 115.56 +Sample_772P DUP chr19:40368303-40398510 30.21 chr19 40383406 124706..124718 13 4 78 99 4 23 3.51 58.42 +Sample_772P DEL chr19:55249974-55290114 40.14 chr19 55270044 128018..128023 6 8 36 36 14 8 -3.14 9.56 +Sample_772P DEL chr21:45959068-46067564 108.50 chr21 46013316 134150..134162 13 75 99 99 37 5 -6.51 158.81 +Sample_772P DEL chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 26 67 67 8 16 -3.45 10.74 +Sample_772P DUP chr22:23652511-23654023 1.51 chr22 23653267 135260..135261 2 40 47 47 6 30 6.63 159.14 +Sample_772P DEL chr22:25044300-25045989 1.69 chr22 25045144 135496..135498 3 80 97 98 53 10 -6.27 108.80 +Sample_772P DUP chr22:42522502-42538640 16.14 chr22 42530571 137422..137436 15 30 99 99 18 35 4.56 92.98 +Sample_772P DEL chr22:50017826-50018584 0.76 chr22 50018205 137887..137889 3 6 43 43 43 5 -4.83 159.20 +Sample_830F DUP chr1:16370247-16385212 14.97 chr1 16377729 1838..1858 21 17 99 99 9 17 4.36 64.49 +Sample_830F DEL chr1:16975251-17046652 71.40 chr1 17010951 1967..1977 11 17 83 99 21 4 -3.81 50.00 +Sample_830F DUP chr1:17084437-17275019 190.58 chr1 17179728 1979..2004 26 5 99 99 4 5 3.00 109.58 +Sample_830F DUP chr1:32137216-32154686 17.47 chr1 32145951 3752..3776 25 1 58 58 5 2 1.99 69.41 +Sample_830F DEL chr1:248285438-248814185 528.75 chr1 248549811 15074..15093 20 4 44 44 4 8 -2.16 36.14 +Sample_830F DEL chr2:130806641-130897669 91.03 chr2 130852155 20144..20151 8 15 42 42 13 7 -2.84 44.42 +Sample_830F DEL chr2:131975924-132202467 226.54 chr2 132089195 20234..20238 5 45 52 52 15 7 -3.82 52.86 +Sample_830F DUP chr3:47046462-47048840 2.38 chr3 47047651 26842..26850 9 17 30 30 25 3 2.53 83.19 +Sample_830F DUP chr3:48606808-48623408 16.60 chr3 48615108 27143..27216 74 10 99 99 7 13 2.38 89.26 +Sample_830F DUP chr3:49713127-49719400 6.27 chr3 49716263 27577..27590 14 3 58 58 12 3 2.34 80.71 +Sample_830F DUP chr3:49724582-49725101 0.52 chr3 49724841 27609..27611 3 35 64 64 16 23 5.41 214.86 +Sample_830F DEL chr5:140165876-140627799 461.92 chr5 140396837 40578..40611 34 7 99 99 7 15 -2.52 47.85 +Sample_830F DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 96 99 99 29 24 7.70 102.62 +Sample_830F DEL chr7:74303804-74312628 8.82 chr7 74308216 50915..50919 5 5 99 99 6 8 -5.13 1.24 +Sample_830F DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 19 99 99 8 19 -5.09 6.46 +Sample_830F DEL chr7:143955790-144075959 120.17 chr7 144015874 54231..54237 7 7 61 61 21 7 -3.24 13.75 +Sample_830F DUP chr8:11985367-12044126 58.76 chr8 12014746 55312..55316 5 28 54 54 20 9 3.77 70.74 +Sample_830F DUP chr8:144894987-144896288 1.30 chr8 144895637 58934..58940 7 13 99 99 3 22 4.11 117.57 +Sample_830F DUP chr8:145540516-145542731 2.22 chr8 145541623 59138..59151 14 7 99 99 6 5 2.97 112.59 +Sample_830F DUP chr8:145649598-145651591 1.99 chr8 145650594 59237..59242 6 10 37 37 5 10 3.12 88.00 +Sample_830F DUP chr9:130565508-130566831 1.32 chr9 130566169 63360..63362 3 3 38 38 3 3 4.60 107.71 +Sample_830F DUP chr9:135945848-135947248 1.40 chr9 135946548 64291..64292 2 25 50 50 5 9 6.65 78.96 +Sample_830F DUP chr9:139743256-139747910 4.66 chr9 139745583 64966..64972 7 4 66 66 3 10 3.21 69.56 +Sample_830F DEL chr9:141069815-141071884 2.07 chr9 141070849 65438..65440 3 56 99 99 21 15 -6.36 57.32 +Sample_830F DUP chr11:809936-823855 13.92 chr11 816895 71295..71306 12 4 87 87 5 5 2.66 63.70 +Sample_830F DEL chr11:123847403-123909708 62.31 chr11 123878555 79304..79308 5 14 51 51 10 16 -3.63 47.69 +Sample_830F DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 28 99 99 59 28 -4.11 9.65 +Sample_830F DUP chr12:31247524-31249313 1.79 chr12 31248418 81838..81840 3 20 37 37 27 19 4.74 69.72 +Sample_830F DEL chr15:23261763-23316186 54.42 chr15 23288974 94422..94432 11 10 75 75 8 3 -2.68 25.52 +Sample_830F DUP chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 4 49 49 4 28 4.13 142.07 +Sample_830F DUP chr16:708896-733781 24.89 chr16 721338 99491..99543 53 16 99 99 7 2 2.63 72.21 +Sample_830F DUP chr16:773857-776085 2.23 chr16 774971 99568..99577 10 5 54 54 4 15 2.62 72.41 +Sample_830F DUP chr16:3073475-3077501 4.03 chr16 3075488 100437..100450 14 3 99 99 9 3 3.21 107.73 +Sample_830F DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 3 99 99 6 4 -4.57 37.48 +Sample_830F DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 10 55 55 24 10 -5.03 47.77 +Sample_830F DEL chr17:18380099-18398258 18.16 chr17 18389178 109355..109362 8 13 96 99 24 12 -3.34 22.65 +Sample_830F DEL chr17:39240459-39412615 172.16 chr17 39326537 111315..111332 18 2 99 99 5 3 -2.62 78.50 +Sample_830F DUP chr17:48267362-48273889 6.53 chr17 48270625 112935..112958 24 5 46 46 6 8 1.98 87.06 +Sample_830F DUP chr17:79099076-79102349 3.27 chr17 79100712 115799..115804 6 6 66 66 5 4 3.46 75.12 +Sample_830F DUP chr17:79862092-79867478 5.39 chr17 79864785 116023..116034 12 3 48 48 3 8 2.40 69.91 +Sample_830F DUP chr17:79982569-79987511 4.94 chr17 79985040 116088..116099 12 24 67 67 19 13 2.54 73.87 +Sample_830F DUP chr17:79993758-80019859 26.10 chr17 80006808 116107..116141 35 3 99 99 4 3 2.11 71.18 +Sample_830F DUP chr19:2042606-2046467 3.86 chr19 2044536 118726..118731 6 10 33 33 7 10 3.08 71.84 +Sample_830F DUP chr19:36268726-36273771 5.05 chr19 36271248 123800..123812 13 5 51 51 7 5 2.36 75.19 +Sample_830F DUP chr20:62319290-62319739 0.45 chr20 62319514 132786..132788 3 19 69 69 8 14 5.51 143.52 +Sample_830F DUP chr21:47536291-47536728 0.44 chr21 47536509 134331..134333 3 35 57 57 4 22 5.18 134.04 +Sample_830F DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 48 52 52 36 26 -4.95 37.48 +Sample_830F DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 8 99 99 10 8 -5.55 0.31 +Sample_830F DEL chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 32 55 55 36 22 -7.01 121.60 +Sample_830F DUP chr22:50898963-50905139 6.18 chr22 50902051 138163..138181 19 5 99 99 14 5 2.50 90.38 +Sample_830F DUP chr22:50957078-50961595 4.52 chr22 50959336 138217..138228 12 6 99 99 6 14 3.42 105.10 +Sample_830M DUP chr1:16360106-16385212 25.11 chr1 16372659 1837..1858 22 3 99 99 3 21 3.06 30.78 +Sample_830M DEL chr1:16918342-17046652 128.31 chr1 16982497 1955..1977 23 11 82 99 6 10 -4.02 34.20 +Sample_830M DUP chr1:17084437-17086181 1.75 chr1 17085309 1979..1982 4 22 67 67 14 15 4.50 81.29 +Sample_830M DUP chr3:47047436-47047939 0.50 chr3 47047687 26846..26848 3 16 47 47 12 18 4.98 59.14 +Sample_830M DUP chr3:48607567-48609971 2.40 chr3 48608769 27147..27157 11 3 53 53 23 3 2.52 50.70 +Sample_830M DUP chr3:48616802-48624541 7.74 chr3 48620671 27184..27220 37 5 99 99 15 2 2.15 47.75 +Sample_830M DUP chr3:49847950-49849639 1.69 chr3 49848794 27697..27702 6 16 64 64 15 8 3.48 54.33 +Sample_830M DUP chr3:52557443-52558897 1.46 chr3 52558170 28442..28448 7 6 43 43 3 13 2.94 55.01 +Sample_830M DEL chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 68 77 77 8 12 -7.77 22.26 +Sample_830M DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 5 76 99 52 0 5.70 46.38 +Sample_830M DUP chr8:144894436-144895696 1.26 chr8 144895066 58933..58937 5 7 47 47 4 6 3.56 67.14 +Sample_830M DUP chr9:136648625-136675327 26.70 chr9 136661976 64495..64508 14 7 72 72 3 17 2.42 31.86 +Sample_830M DUP chr14:105179165-105179943 0.78 chr14 105179554 94152..94154 3 33 39 39 3 23 4.70 41.79 +Sample_830M DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 17 99 99 37 17 -2.88 6.43 +Sample_830M DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 13 37 37 34 13 6.02 29.87 +Sample_830M DUP chr16:732953-733781 0.83 chr16 733367 99539..99543 5 12 36 36 26 9 3.44 62.20 +Sample_830M DUP chr16:772590-775880 3.29 chr16 774235 99565..99576 12 2 36 36 4 5 2.32 36.03 +Sample_830M DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 46 88 88 16 31 5.98 35.38 +Sample_830M DUP chr16:28616918-28620649 3.73 chr16 28618783 102277..102281 5 39 99 99 25 13 4.65 43.17 +Sample_830M DUP chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 3 99 99 3 6 3.52 45.52 +Sample_830M DUP chr17:18145480-18149776 4.30 chr17 18147628 109277..109287 11 4 58 58 4 14 2.55 39.78 +Sample_830M DEL chr17:39202798-39316983 114.19 chr17 39259890 111312..111321 10 6 49 49 4 20 -2.63 39.72 +Sample_830M DUP chr19:14876336-14884866 8.53 chr19 14880601 121892..121897 6 7 50 50 23 7 3.30 35.43 +Sample_830M DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 23 99 99 18 6 -4.54 15.53 +Sample_830M DEL chr21:45959068-46048294 89.23 chr21 46003681 134150..134160 11 4 89 89 26 2 -2.78 97.22 +Sample_830M DUP chr22:21064196-21068988 4.79 chr22 21066592 134973..134979 7 14 77 77 9 11 3.34 54.67 +Sample_830M DEL chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 10 90 90 7 4 -3.46 0.00 +Sample_830M DUP chr22:50900988-50903558 2.57 chr22 50902273 138169..138175 7 3 78 78 6 2 3.30 53.05 +Sample_830M DEL chrX:149100416-149102355 1.94 chrX 149101385 141610..141612 3 10 30 30 10 13 -4.50 15.79 +Sample_830M DUP chrX:153043716-153050628 6.91 chrX 153047172 141878..141894 17 13 32 32 14 11 2.09 37.03 +Sample_830P DUP chr1:16975251-16976914 1.66 chr1 16976082 1967..1968 2 27 50 50 34 10 6.63 76.18 +Sample_830P DUP chr1:17084437-17257892 173.46 chr1 17171164 1979..1994 16 7 99 99 14 7 5.42 63.91 +Sample_830P DUP chr3:49720276-49720579 0.30 chr3 49720427 27593..27594 2 29 30 30 26 18 6.05 57.07 +Sample_830P DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 50 99 99 40 33 5.39 47.66 +Sample_830P DEL chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 31 34 34 12 17 -6.14 20.44 +Sample_830P DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 99 99 99 95 27 9.93 44.70 +Sample_830P DUP chr10:46963840-47133836 170.00 chr10 47048838 66733..66742 10 2 99 99 4 4 3.46 39.67 +Sample_830P DUP chr11:71939234-71941063 1.83 chr11 71940148 76917..76923 7 38 40 40 27 5 2.94 36.69 +Sample_830P DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 31 34 34 16 33 -4.45 7.09 +Sample_830P DEL chr16:1274602-1280185 5.58 chr16 1277393 99708..99713 6 12 32 32 12 12 -3.06 8.87 +Sample_830P DEL chr16:3076868-3077281 0.41 chr16 3077074 100447..100449 3 24 35 35 17 7 -4.66 60.97 +Sample_830P DEL chr16:74442531-74446778 4.25 chr16 74444654 105291..105296 6 14 96 99 7 14 -3.94 20.41 +Sample_830P DUP chr22:23656155-23656901 0.75 chr22 23656528 135263..135264 2 31 32 32 20 31 6.11 79.80 +Sample_894F DEL chr1:14970-17742 2.77 chr1 16356 2..4 3 33 62 62 26 52 -5.23 39.50 +Sample_894F DUP chr1:16348486-16359751 11.27 chr1 16354118 1819..1836 18 21 99 99 31 21 4.97 96.61 +Sample_894F DUP chr1:16383364-16385212 1.85 chr1 16384288 1857..1858 2 24 48 48 20 37 6.72 142.73 +Sample_894F DEL chr1:17248445-17277617 29.17 chr1 17263031 1987..2006 20 6 99 99 22 6 -5.76 70.92 +Sample_894F DEL chr1:154919893-154920842 0.95 chr1 154920367 9646..9649 4 22 99 99 27 1 -5.78 44.88 +Sample_894F DUP chr1:155184845-155205102 20.26 chr1 155194973 9807..9819 13 6 99 99 24 6 4.06 109.63 +Sample_894F DUP chr1:207718653-207741387 22.73 chr1 207730020 13418..13420 3 23 87 88 54 20 6.01 56.55 +Sample_894F DEL chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 59 96 99 20 41 -5.02 41.19 +Sample_894F DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 32 61 61 19 5 -4.33 33.52 +Sample_894F DUP chr7:102114808-102235816 121.01 chr7 102175312 52449..52454 6 29 77 77 16 32 3.72 71.78 +Sample_894F DEL chr8:7153153-7320381 167.23 chr8 7236767 55171..55182 12 10 99 99 10 24 -3.00 19.28 +Sample_894F DUP chr9:72042449-72047592 5.14 chr9 72045020 60870..60871 2 29 54 54 25 29 6.90 102.01 +Sample_894F DEL chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 46 70 70 35 26 -7.34 96.84 +Sample_894F DUP chr10:47658234-47756092 97.86 chr10 47707163 66745..66766 22 26 99 99 25 49 3.52 81.33 +Sample_894F DUP chr10:89120238-89124960 4.72 chr10 89122599 68298..68299 2 66 89 90 30 9 8.30 92.30 +Sample_894F DEL chr10:135368855-135371718 2.86 chr10 135370286 70976..70982 7 4 99 99 11 4 -3.64 97.66 +Sample_894F DEL chr11:61015891-61017486 1.60 chr11 61016688 74469..74471 3 30 99 99 0 15 -6.69 50.85 +Sample_894F DUP chr12:88570-90655 2.09 chr12 89612 79927..79930 4 31 37 37 31 35 3.83 60.98 +Sample_894F DEL chr12:11506008-11546911 40.90 chr12 11526459 81255..81259 5 6 99 99 38 3 -5.75 24.37 +Sample_894F DUP chr15:20776102-20776700 0.60 chr15 20776401 94349..94350 2 52 60 60 26 59 6.95 89.87 +Sample_894F DEL chr15:22145375-22369516 224.14 chr15 22257445 94358..94363 6 6 60 60 10 6 -3.59 46.20 +Sample_894F DEL chr15:23308564-23444098 135.53 chr15 23376331 94427..94438 12 14 98 99 15 17 -3.40 12.26 +Sample_894F DUP chr15:41853325-41871526 18.20 chr15 41862425 95370..95387 18 12 99 99 14 13 2.50 73.96 +Sample_894F DUP chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 21 99 99 21 48 5.91 212.00 +Sample_894F DEL chr16:223124-223708 0.58 chr16 223416 99316..99317 2 46 72 72 23 4 -7.55 19.31 +Sample_894F DUP chr16:1280163-1292554 12.39 chr16 1286358 99713..99717 5 12 99 99 12 39 7.18 150.85 +Sample_894F DUP chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 39 99 99 29 28 6.38 128.22 +Sample_894F DEL chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 5 30 30 5 25 -3.77 54.43 +Sample_894F DUP chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 39 82 82 9 34 4.66 119.66 +Sample_894F DUP chr17:18380099-18391071 10.97 chr17 18385585 109355..109357 3 44 71 71 59 6 5.57 100.16 +Sample_894F DUP chr17:20356330-20405283 48.95 chr17 20380806 109568..109573 6 33 98 99 30 31 4.12 75.04 +Sample_894F DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 81 99 99 17 26 -9.20 74.00 +Sample_894F DEL chr17:40766514-40811964 45.45 chr17 40789239 111750..111753 4 27 31 31 26 21 -3.88 56.06 +Sample_894F DUP chr19:43349168-43441330 92.16 chr19 43395249 125377..125392 16 62 99 99 3 26 5.20 91.78 +Sample_894F DEL chr19:43585033-43709790 124.76 chr19 43647411 125399..125408 10 28 99 99 3 22 -4.62 33.22 +Sample_894F DUP chr19:49526127-49527593 1.47 chr19 49526860 126640..126641 2 34 59 59 34 34 7.08 127.14 +Sample_894F DEL chr19:49547102-49552368 5.27 chr19 49549735 126650..126652 3 79 95 96 2 6 -6.18 93.14 +Sample_894F DEL chr19:54726815-54746186 19.37 chr19 54736500 127865..127867 3 13 51 51 41 12 -5.14 35.45 +Sample_894F DEL chr19:55247287-55294990 47.70 chr19 55271138 128016..128024 9 6 58 99 17 0 -3.50 6.17 +Sample_894F DUP chr19:55315346-55361964 46.62 chr19 55338655 128025..128034 10 11 70 99 1 17 3.79 57.69 +Sample_894F DEL chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 30 15 -10.00 0.96 +Sample_894F DEL chr22:21330940-21331384 0.45 chr22 21331162 135043..135045 3 29 45 45 24 15 -4.93 131.22 +Sample_894F DUP chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 69 79 79 5 3 7.74 276.75 +Sample_894F DEL chr22:25044121-25045989 1.87 chr22 25045055 135495..135498 4 59 99 99 3 29 -5.28 178.76 +Sample_894F DEL chrX:55115497-55117043 1.55 chrX 55116270 139931..139932 2 31 31 31 26 17 -5.88 33.56 +Sample_894F DUP chrX:148626914-148627429 0.52 chrX 148627171 141596..141597 2 36 57 57 29 28 7.08 153.46 +Sample_894F DEL chrX:149101840-149102355 0.52 chrX 149102097 141611..141612 2 35 57 57 19 3 -6.92 69.86 +Sample_894M DEL chr1:14970-70008 55.04 chr1 42489 2..5 4 15 99 99 12 15 -5.20 21.57 +Sample_894M DEL chr1:16913545-16976914 63.37 chr1 16945229 1952..1968 17 13 99 99 12 8 -4.37 113.25 +Sample_894M DEL chr1:152758753-152770656 11.90 chr1 152764704 9192..9194 3 3 47 47 3 36 -4.89 22.49 +Sample_894M DUP chr2:96689057-96690085 1.03 chr2 96689571 18718..18720 3 19 67 67 23 11 5.50 114.17 +Sample_894M DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 30 84 84 19 30 -4.69 71.08 +Sample_894M DUP chr5:819640-848775 29.14 chr5 834207 37329..37335 7 13 98 99 15 15 4.32 95.09 +Sample_894M DUP chr5:68856051-68929028 72.98 chr5 68892539 38765..38766 2 17 34 34 7 17 6.03 96.33 +Sample_894M DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 59 99 99 16 27 6.88 130.44 +Sample_894M DEL chr7:100331650-100334972 3.32 chr7 100333311 52178..52181 4 25 44 44 20 15 -4.04 30.66 +Sample_894M DUP chr7:102119255-102246434 127.18 chr7 102182844 52450..52455 6 66 99 99 16 6 5.32 79.02 +Sample_894M DEL chr8:7154584-7305571 150.99 chr8 7230077 55172..55179 8 6 96 97 5 5 -3.38 16.30 +Sample_894M DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 28 84 84 22 30 -4.78 23.21 +Sample_894M DUP chr9:72042449-72047592 5.14 chr9 72045020 60870..60871 2 29 54 54 23 26 6.90 93.95 +Sample_894M DEL chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 37 61 61 31 28 -6.99 79.50 +Sample_894M DUP chr10:46918530-47756092 837.56 chr10 47337311 66731..66766 36 6 99 99 3 46 6.90 111.32 +Sample_894M DUP chr10:124344787-124359609 14.82 chr10 124352198 70420..70429 10 6 99 99 5 21 4.87 100.99 +Sample_894M DEL chr10:135368855-135371422 2.57 chr10 135370138 70976..70981 6 3 43 43 4 6 -3.18 95.96 +Sample_894M DEL chr11:61015891-61017486 1.60 chr11 61016688 74469..74471 3 20 99 99 20 13 -6.63 43.51 +Sample_894M DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 52 99 99 78 33 4.29 68.34 +Sample_894M DEL chr15:23308564-23443575 135.01 chr15 23376069 94427..94437 11 18 93 99 10 7 -3.73 3.66 +Sample_894M DUP chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 40 46 46 14 22 4.97 213.70 +Sample_894M DUP chr15:102462345-102514309 51.97 chr15 102488327 99266..99268 3 7 99 99 7 24 7.00 65.32 +Sample_894M DUP chr16:1280163-1292554 12.39 chr16 1286358 99713..99717 5 50 99 99 37 32 8.18 140.88 +Sample_894M DEL chr16:69984810-70012015 27.21 chr16 69998412 104856..104862 7 3 99 99 22 3 -4.16 32.45 +Sample_894M DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 17 33 33 31 17 -4.50 20.62 +Sample_894M DUP chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 6 99 99 3 6 6.64 114.66 +Sample_894M DUP chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 37 99 99 15 36 6.88 122.28 +Sample_894M DUP chr17:34591884-34757050 165.17 chr17 34674467 110587..110588 2 36 36 36 17 14 6.46 75.36 +Sample_894M DUP chr19:40391998-40398510 6.51 chr19 40395254 124715..124718 4 56 99 99 15 3 6.63 104.76 +Sample_894M DEL chr19:43528843-43709790 180.95 chr19 43619316 125395..125408 14 34 99 99 6 34 -3.90 28.28 +Sample_894M DUP chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 9 44 44 9 5 4.86 103.72 +Sample_894M DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 67 77 77 5 12 -7.85 62.12 +Sample_894M DUP chr19:54724025-54726002 1.98 chr19 54725013 127861..127864 4 13 99 99 11 6 7.61 87.75 +Sample_894M DUP chr19:54745902-54756412 10.51 chr19 54751157 127867..127873 7 4 99 99 6 3 3.98 83.75 +Sample_894M DEL chr19:55247287-55264503 17.22 chr19 55255895 128016..128020 5 13 99 99 15 3 -4.46 0.06 +Sample_894M DUP chr21:45970318-46012386 42.07 chr21 45991352 134151..134156 6 9 47 47 9 46 3.27 283.88 +Sample_894M DEL chr22:25041713-25055114 13.40 chr22 25048413 135494..135500 7 9 99 99 8 9 -4.24 112.67 +Sample_894M DEL chr22:25713888-25777544 63.66 chr22 25745716 135561..135569 9 20 99 99 39 20 -4.04 30.10 +Sample_894M DUP chr22:42905034-42910310 5.28 chr22 42907672 137453..137457 5 17 34 34 9 13 3.41 73.25 +Sample_894M DEL chrX:149101840-149102355 0.52 chrX 149102097 141611..141612 2 57 72 72 28 23 -7.64 55.36 +Sample_894P DEL chr1:12916941-12946025 29.09 chr1 12931483 1613..1620 8 16 99 99 5 16 -4.91 36.34 +Sample_894P DUP chr1:16348486-16360544 12.06 chr1 16354515 1819..1837 19 40 99 99 25 40 7.99 138.70 +Sample_894P DUP chr1:16383364-16385212 1.85 chr1 16384288 1857..1858 2 18 41 41 17 28 6.46 186.82 +Sample_894P DEL chr1:16809782-16811401 1.62 chr1 16810591 1936..1937 2 99 99 99 44 29 -9.89 1.28 +Sample_894P DUP chr1:17084437-17087597 3.16 chr1 17086017 1979..1985 7 32 99 99 7 8 4.03 237.93 +Sample_894P DEL chr1:17250820-17275421 24.60 chr1 17263120 1989..2005 17 14 99 99 6 12 -2.61 131.76 +Sample_894P DEL chr1:22328149-22336350 8.20 chr1 22332249 2731..2737 7 11 99 99 33 11 -6.08 36.75 +Sample_894P DUP chr1:36773371-36773564 0.19 chr1 36773467 4352..4353 2 30 30 30 29 26 6.04 287.30 +Sample_894P DEL chr1:40229361-40237020 7.66 chr1 40233190 4706..4709 4 4 34 34 5 9 -3.71 43.56 +Sample_894P DUP chr1:104108057-104166606 58.55 chr1 104137331 7333..7345 13 8 99 99 10 12 2.87 49.45 +Sample_894P DEL chr1:154919893-154920842 0.95 chr1 154920367 9646..9649 4 17 99 99 20 15 -5.49 57.30 +Sample_894P DUP chr1:155184845-155205102 20.26 chr1 155194973 9807..9819 13 42 99 99 51 27 3.32 120.84 +Sample_894P DUP chr1:207718653-207741387 22.73 chr1 207730020 13418..13420 3 35 92 93 57 21 6.15 63.61 +Sample_894P DUP chr2:87140935-87141044 0.11 chr2 87140989 18559..18559 1 30 30 30 25 20 10.00 244.71 +Sample_894P DUP chr2:114341230-114353092 11.86 chr2 114347161 19699..19702 4 5 96 99 27 5 5.43 159.77 +Sample_894P DUP chr2:130897464-130897669 0.21 chr2 130897566 20150..20151 2 35 35 35 6 19 6.19 160.56 +Sample_894P DUP chr2:131975924-132202467 226.54 chr2 132089195 20234..20238 5 15 50 50 21 14 3.80 158.41 +Sample_894P DUP chr4:190903679-190905707 2.03 chr4 190904693 37228..37230 3 48 99 99 18 24 7.02 200.41 +Sample_894P DEL chr5:837480-848775 11.30 chr5 843127 37332..37335 4 21 97 99 5 7 -5.13 67.13 +Sample_894P DEL chr5:21495207-21497349 2.14 chr5 21496278 37853..37854 2 14 36 36 13 4 -6.16 47.64 +Sample_894P DUP chr5:140174444-140627799 453.36 chr5 140401121 40579..40611 33 9 99 99 4 21 2.52 122.74 +Sample_894P DEL chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 3 32 32 3 20 -3.68 56.59 +Sample_894P DEL chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 87 94 95 4 22 -8.42 88.27 +Sample_894P DEL chr8:7153153-7320381 167.23 chr8 7236767 55171..55182 12 10 99 99 10 4 -3.74 18.57 +Sample_894P DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 99 99 99 93 62 -9.75 5.57 +Sample_894P DUP chr9:141070053-141071884 1.83 chr9 141070968 65439..65440 2 12 40 40 12 19 6.23 236.67 +Sample_894P DEL chr10:46963840-47416976 453.14 chr10 47190408 66733..66744 12 12 99 99 3 14 -5.30 77.08 +Sample_894P DUP chr10:89120238-89124960 4.72 chr10 89122599 68298..68299 2 43 67 67 36 13 7.45 99.43 +Sample_894P DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 85 99 99 82 38 5.82 93.59 +Sample_894P DUP chr12:9073581-9083523 9.94 chr12 9078552 81033..81036 4 5 40 40 5 16 3.96 80.66 +Sample_894P DEL chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 55 99 99 26 13 -3.98 37.68 +Sample_894P DEL chr12:11506008-11507488 1.48 chr12 11506748 81255..81257 3 6 46 46 23 2 -4.86 36.01 +Sample_894P DUP chr15:20776609-20776700 0.09 chr15 20776654 94350..94350 1 30 30 30 15 30 10.00 98.08 +Sample_894P DEL chr15:22143113-22145802 2.69 chr15 22144457 94357..94359 3 6 44 44 6 44 -4.69 27.26 +Sample_894P DUP chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 30 79 79 15 17 4.11 90.90 +Sample_894P DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 71 99 99 12 83 -7.25 34.11 +Sample_894P DEL chr16:1291435-1308494 17.06 chr16 1299964 99716..99722 7 29 99 99 5 11 -3.90 113.22 +Sample_894P DEL chr16:2155323-2156949 1.63 chr16 2156136 100136..100140 5 52 86 86 40 14 -4.21 59.02 +Sample_894P DUP chr16:28606871-28621357 14.49 chr16 28614114 102274..102282 9 6 99 99 4 3 5.47 134.92 +Sample_894P DUP chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 11 55 55 11 18 3.71 111.51 +Sample_894P DEL chr16:74385938-74452196 66.26 chr16 74419067 105286..105298 13 23 99 99 18 28 -3.78 66.42 +Sample_894P DUP chr17:39164774-39341147 176.37 chr17 39252960 111308..111325 18 3 62 91 6 4 2.33 152.67 +Sample_894P DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 75 99 99 10 0 -8.09 91.67 +Sample_894P DUP chr19:43348511-43530631 182.12 chr19 43439571 125376..125396 21 11 99 99 11 25 4.85 98.22 +Sample_894P DUP chr19:49520324-49527593 7.27 chr19 49523958 126639..126641 3 17 99 99 4 26 6.31 193.29 +Sample_894P DEL chr19:49535130-49552368 17.24 chr19 49543749 126643..126652 10 14 94 99 14 0 -3.77 67.44 +Sample_894P DUP chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 10 49 49 0 13 5.13 177.61 +Sample_894P DEL chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 5 94 95 26 5 -4.33 42.63 +Sample_894P DEL chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 31 -10.00 0.64 +Sample_894P DUP chr21:45970318-46000481 30.16 chr21 45985399 134151..134155 5 52 99 99 4 5 5.16 383.32 +Sample_894P DUP chr21:46020497-46117959 97.46 chr21 46069228 134157..134167 11 18 99 99 5 9 3.26 310.90 +Sample_894P DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 9 61 61 23 5 3.16 75.10 +Sample_894P DUP chrX:148626914-148627429 0.52 chrX 148627171 141596..141597 2 55 78 78 33 20 7.89 123.73 +Sample_894P DEL chrX:149101840-149102355 0.52 chrX 149102097 141611..141612 2 70 94 94 30 13 -8.45 7.11 +Sample_NN1075 DEL chr1:12851546-12921764 70.22 chr1 12886655 1602..1616 15 30 99 99 35 3 -3.22 42.20 +Sample_NN1075 DUP chr1:16918342-16976914 58.57 chr1 16947628 1955..1968 14 14 87 99 10 0 3.16 123.83 +Sample_NN1075 DEL chr1:17017713-17046652 28.94 chr1 17032182 1969..1977 9 3 95 99 0 3 -3.15 32.38 +Sample_NN1075 DUP chr1:17085298-17275019 189.72 chr1 17180158 1980..2004 25 11 99 99 24 5 4.10 105.31 +Sample_NN1075 DUP chr2:87140935-87141044 0.11 chr2 87140989 18559..18559 1 30 30 30 16 20 10.00 129.12 +Sample_NN1075 DUP chr2:114346127-114384715 38.59 chr2 114365421 19700..19709 10 8 42 42 16 8 2.56 70.00 +Sample_NN1075 DUP chr2:130807389-130897944 90.56 chr2 130852666 20145..20152 8 3 39 39 8 4 2.79 68.59 +Sample_NN1075 DUP chr2:233244223-233246077 1.85 chr2 233245150 23899..23904 6 30 99 99 9 17 4.84 115.56 +Sample_NN1075 DUP chr3:49724117-49724911 0.80 chr3 49724514 27607..27610 4 26 42 42 7 40 4.02 202.38 +Sample_NN1075 DEL chr3:75470705-75484266 13.56 chr3 75477485 29262..29269 8 21 99 99 74 21 -7.18 44.37 +Sample_NN1075 DUP chr3:195392937-195452155 59.22 chr3 195422546 32791..32798 8 10 98 99 5 5 4.11 68.83 +Sample_NN1075 DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 74 95 97 3 14 8.49 130.49 +Sample_NN1075 DUP chr7:76111825-76126794 14.97 chr7 76119309 51073..51075 3 4 37 37 4 15 4.65 69.42 +Sample_NN1075 DUP chr8:12039614-12291623 252.01 chr8 12165618 55315..55323 9 3 36 36 12 4 2.65 56.76 +Sample_NN1075 DUP chr9:90744221-90748584 4.36 chr9 90746402 61295..61297 3 6 41 41 8 9 4.80 97.79 +Sample_NN1075 DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 45 99 99 45 4 8.52 110.63 +Sample_NN1075 DEL chr11:89603608-89609185 5.58 chr11 89606396 77731..77735 5 15 55 55 14 49 -3.63 15.61 +Sample_NN1075 DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 7 99 99 80 7 -3.90 14.36 +Sample_NN1075 DUP chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 11 34 34 10 6 3.83 54.10 +Sample_NN1075 DEL chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 23 39 39 38 8 -3.51 11.25 +Sample_NN1075 DUP chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 12 99 99 16 12 3.74 61.24 +Sample_NN1075 DEL chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 7 95 97 7 7 -5.05 100.78 +Sample_NN1075 DUP chr16:21475024-21531765 56.74 chr16 21503394 101744..101748 5 47 98 99 14 27 4.42 65.18 +Sample_NN1075 DUP chr16:22441117-22588186 147.07 chr16 22514651 101863..101869 7 4 73 73 4 18 3.31 52.70 +Sample_NN1075 DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 24 98 99 21 22 -4.61 22.70 +Sample_NN1075 DUP chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 6 99 99 28 6 6.14 98.74 +Sample_NN1075 DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 11 98 99 4 37 -5.59 29.14 +Sample_NN1075 DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 10 98 99 3 13 3.28 58.67 +Sample_NN1075 DEL chr17:20404829-20407811 2.98 chr17 20406320 109572..109577 6 11 98 99 13 16 -4.33 30.93 +Sample_NN1075 DUP chr17:48266103-48274031 7.93 chr17 48270067 112929..112959 31 4 98 99 4 6 2.26 94.38 +Sample_NN1075 DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 4 72 72 14 4 3.97 49.77 +Sample_NN1075 DEL chr19:43258385-43269831 11.45 chr19 43264108 125371..125375 5 15 75 75 15 21 -3.95 18.85 +Sample_NN1075 DEL chr19:43708038-43763287 55.25 chr19 43735662 125407..125410 4 68 99 99 15 12 -6.21 0.00 +Sample_NN1075 DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 4 30 30 13 4 -4.46 53.60 +Sample_NN1075 DUP chr19:50462617-50464429 1.81 chr19 50463523 127078..127081 4 12 32 32 13 7 3.78 70.14 +Sample_NN1075 DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 33 94 95 31 38 -4.31 36.01 +Sample_NN1075 DUP chr20:3734158-3739325 5.17 chr20 3736741 129196..129199 4 25 58 58 22 15 4.33 66.81 +Sample_NN1075 DUP chr21:45959068-46022083 63.02 chr21 45990575 134150..134158 9 7 99 99 7 8 3.50 211.27 +Sample_NN1075 DUP chr21:47536565-47538590 2.03 chr21 47537577 134332..134336 5 18 33 33 32 17 3.40 96.63 +Sample_NN1075 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 39 77 77 29 38 -5.60 39.27 +Sample_NN2624 DUP chr1:16918654-16946533 27.88 chr1 16932593 1956..1963 8 33 98 99 32 21 3.34 172.85 +Sample_NN2624 DUP chr1:17017713-17275421 257.71 chr1 17146567 1969..2005 37 2 90 99 10 5 3.69 137.47 +Sample_NN2624 DUP chr1:104108057-104162406 54.35 chr1 104135231 7333..7344 12 6 99 99 15 4 5.00 71.88 +Sample_NN2624 DEL chr2:130897464-130899954 2.49 chr2 130898709 20150..20154 5 17 35 35 18 16 -3.43 51.88 +Sample_NN2624 DUP chr3:195392937-195479317 86.38 chr3 195436127 32791..32805 15 7 98 99 10 5 3.63 98.26 +Sample_NN2624 DUP chr3:195701268-195711608 10.34 chr3 195706438 32844..32850 7 35 66 66 20 31 3.24 99.61 +Sample_NN2624 DUP chr5:833888-848775 14.89 chr5 841331 37331..37335 5 23 98 99 30 7 4.76 114.40 +Sample_NN2624 DEL chr5:175528050-175530783 2.73 chr5 175529416 42080..42083 4 10 40 40 9 3 -3.92 40.90 +Sample_NN2624 DEL chr7:74303804-74312628 8.82 chr7 74308216 50915..50919 5 3 99 99 7 4 -4.48 34.51 +Sample_NN2624 DEL chr8:12043861-12245843 201.98 chr8 12144852 55316..55319 4 30 31 31 5 4 -3.97 50.85 +Sample_NN2624 DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 36 36 36 36 0 -6.01 1.78 +Sample_NN2624 DUP chr9:178816-432324 253.51 chr9 305570 59399..59432 34 60 99 99 0 21 6.03 70.01 +Sample_NN2624 DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 24 99 99 11 20 8.04 137.75 +Sample_NN2624 DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 11 99 99 11 9 -6.14 39.70 +Sample_NN2624 DUP chr11:1278470-1279597 1.13 chr11 1279033 71488..71491 4 9 62 62 9 6 4.38 117.85 +Sample_NN2624 DEL chr11:60970984-60978907 7.92 chr11 60974945 74466..74468 3 38 99 99 50 31 -6.97 14.84 +Sample_NN2624 DUP chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 7 32 32 7 7 2.49 71.32 +Sample_NN2624 DEL chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 13 99 99 13 5 -3.86 40.02 +Sample_NN2624 DUP chr15:23282265-23311838 29.57 chr15 23297051 94424..94429 6 11 31 31 12 9 3.08 103.23 +Sample_NN2624 DEL chr15:102513423-102514309 0.89 chr15 102513866 99267..99268 2 53 53 53 51 47 -6.90 0.17 +Sample_NN2624 DUP chr16:18532087-18604038 71.95 chr16 18568062 101380..101392 13 19 99 99 49 19 3.17 71.58 +Sample_NN2624 DEL chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 5 56 56 4 14 -2.90 69.23 +Sample_NN2624 DEL chr16:69984810-70016397 31.59 chr16 70000603 104856..104863 8 4 99 99 27 4 -4.21 39.01 +Sample_NN2624 DEL chr16:70207928-70220796 12.87 chr16 70214362 104896..104898 3 53 61 61 8 41 -5.23 17.45 +Sample_NN2624 DUP chr16:74385938-74452196 66.26 chr16 74419067 105286..105298 13 13 99 99 12 26 4.44 109.48 +Sample_NN2624 DEL chr17:16703265-16736147 32.88 chr17 16719706 109045..109050 6 11 98 99 7 38 -6.67 44.01 +Sample_NN2624 DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 69 69 6 11 2.62 78.87 +Sample_NN2624 DUP chr19:12500831-12577664 76.83 chr19 12539247 121267..121272 6 15 99 99 29 15 4.05 67.12 +Sample_NN2624 DUP chr19:40373945-40380711 6.77 chr19 40377328 124708..124711 4 16 36 36 16 7 3.89 75.24 +Sample_NN2624 DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 35 99 99 7 5 -7.20 28.87 +Sample_NN2624 DEL chr19:54726815-54756266 29.45 chr19 54741540 127865..127872 8 4 82 82 27 3 -3.17 43.40 +Sample_NN2624 DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 23 99 99 20 20 -5.82 53.56 +Sample_NN2624 DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 39 99 99 36 12 -4.38 17.48 +Sample_NN2624 DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 21 62 62 21 3 -3.42 159.27 +Sample_NN2624 DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 28 86 86 37 4 -3.40 20.58 +Sample_NN2742 DUP chr1:17087450-17090975 3.53 chr1 17089212 1985..1986 2 36 48 48 5 6 6.39 197.08 +Sample_NN2742 DEL chr1:17249158-17275421 26.26 chr1 17262289 1988..2005 18 4 62 62 3 9 -2.18 81.74 +Sample_NN2742 DUP chr1:104108057-104118162 10.11 chr1 104113109 7333..7338 6 4 42 42 4 12 3.17 60.65 +Sample_NN2742 DUP chr4:119158201-119475357 317.16 chr4 119316779 36086..36104 19 12 98 99 12 31 2.67 46.83 +Sample_NN2742 DEL chr5:180375355-180431762 56.41 chr5 180403558 42756..42763 8 14 99 99 30 12 -5.15 11.23 +Sample_NN2742 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 62 99 99 18 30 -5.61 61.22 +Sample_NN2742 DUP chr7:72418838-72420735 1.90 chr7 72419786 50664..50669 6 43 99 99 6 10 5.23 110.94 +Sample_NN2742 DEL chr7:74197282-74299569 102.29 chr7 74248425 50910..50913 4 5 99 99 45 5 -5.70 47.56 +Sample_NN2742 DUP chr7:74573056-74578824 5.77 chr7 74575940 50924..50926 3 10 65 65 10 21 5.26 88.24 +Sample_NN2742 DEL chr7:74988447-75048176 59.73 chr7 75018311 50928..50934 7 7 96 98 12 5 -3.60 36.54 +Sample_NN2742 DUP chr8:7305276-7320381 15.11 chr8 7312828 55179..55182 4 21 68 68 34 18 4.40 55.55 +Sample_NN2742 DUP chr8:12039614-12286407 246.79 chr8 12163010 55315..55321 7 17 99 99 20 5 4.16 75.18 +Sample_NN2742 DEL chr9:117085943-117088757 2.81 chr9 117087350 62580..62584 5 6 58 58 7 6 -3.74 36.81 +Sample_NN2742 DUP chr10:89120238-89124960 4.72 chr10 89122599 68298..68299 2 39 63 63 33 10 7.27 55.63 +Sample_NN2742 DEL chr10:135368348-135370660 2.31 chr10 135369504 70975..70980 6 20 62 62 19 49 -3.47 82.20 +Sample_NN2742 DEL chr12:9447028-9447570 0.54 chr12 9447299 81112..81113 2 29 39 39 15 14 -6.36 73.06 +Sample_NN2742 DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 38 99 99 50 29 5.73 72.19 +Sample_NN2742 DEL chr15:23299681-23444098 144.42 chr15 23371889 94425..94438 14 25 99 99 4 25 -3.20 34.57 +Sample_NN2742 DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 16 99 99 16 97 -6.26 9.03 +Sample_NN2742 DEL chr16:1279191-1290729 11.54 chr16 1284960 99711..99714 4 9 92 93 3 9 -4.96 30.63 +Sample_NN2742 DEL chr16:28616918-28620649 3.73 chr16 28618783 102277..102281 5 26 97 99 21 18 -4.47 41.83 +Sample_NN2742 DUP chr16:74446671-74447574 0.90 chr16 74447122 105296..105297 2 95 99 99 38 4 9.40 179.64 +Sample_NN2742 DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 6 98 99 6 28 3.15 69.48 +Sample_NN2742 DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 98 99 13 5 -3.23 34.05 +Sample_NN2742 DEL chr17:25969264-25974144 4.88 chr17 25971704 109649..109654 6 17 57 57 7 14 -3.39 43.06 +Sample_NN2742 DEL chr19:43585033-43709790 124.76 chr19 43647411 125399..125408 10 3 99 99 3 13 -3.45 30.09 +Sample_NN2742 DEL chr19:54724398-54725251 0.85 chr19 54724824 127862..127863 2 31 54 54 53 6 -6.93 1.62 +Sample_NN2742 DUP chr19:54784816-54803978 19.16 chr19 54794397 127894..127900 7 14 92 92 8 25 3.50 75.13 +Sample_NN2742 DUP chr19:55294938-55361964 67.03 chr19 55328451 128024..128034 11 8 87 99 7 26 3.17 47.17 +Sample_NN2742 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 51 76 76 31 35 -5.58 49.12 +Sample_NN2742 DUP chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 27 32 32 8 15 3.01 44.65 +Sample_NN2742 DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 8 99 99 5 4 4.06 53.41 +Sample_NN2742 DUP chr22:42898755-42952594 53.84 chr22 42925674 137451..137461 11 36 99 99 28 35 4.31 68.99 +Sample_NN2742 DUP chrX:148626914-148627429 0.52 chrX 148627171 141596..141597 2 37 38 38 7 18 6.31 83.42 +Sample_NN2742 DEL chrX:149101840-149102355 0.52 chrX 149102097 141611..141612 2 43 48 48 8 16 -6.69 6.35 +Sample_NN2901 DUP chr1:12916941-12943231 26.29 chr1 12930086 1613..1619 7 11 36 36 8 9 2.90 74.34 +Sample_NN2901 DEL chr1:16895568-16976914 81.35 chr1 16936241 1945..1968 24 5 99 99 5 20 -3.02 76.01 +Sample_NN2901 DUP chr1:17090909-17275421 184.51 chr1 17183165 1986..2005 20 6 99 99 45 6 4.85 113.18 +Sample_NN2901 DUP chr2:233245333-233246077 0.74 chr2 233245705 23902..23904 3 67 69 69 16 10 5.54 123.22 +Sample_NN2901 DUP chr3:48617021-48620086 3.07 chr3 48618553 27186..27200 15 10 99 99 10 33 3.00 118.30 +Sample_NN2901 DUP chr3:49723746-49724911 1.17 chr3 49724328 27606..27610 5 16 74 74 16 46 4.04 223.33 +Sample_NN2901 DUP chr3:195392937-195475935 83.00 chr3 195434436 32791..32802 12 17 98 99 17 8 4.16 86.61 +Sample_NN2901 DUP chr3:195690171-195711608 21.44 chr3 195700889 32841..32850 10 8 98 99 8 45 3.87 75.13 +Sample_NN2901 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 14 99 99 13 8 4.80 118.42 +Sample_NN2901 DEL chr8:12245467-12287960 42.49 chr8 12266713 55318..55322 5 14 73 73 2 7 -3.96 29.97 +Sample_NN2901 DEL chr15:21134198-21134625 0.43 chr15 21134411 94353..94354 2 44 71 71 34 22 -7.32 5.98 +Sample_NN2901 DUP chr15:22014420-22145802 131.38 chr15 22080111 94356..94359 4 31 99 99 21 3 5.46 77.50 +Sample_NN2901 DUP chr15:74364559-74368131 3.57 chr15 74366345 97609..97610 2 32 56 56 15 25 6.85 91.01 +Sample_NN2901 DEL chr15:78206559-78211657 5.10 chr15 78209108 98002..98009 8 5 99 99 5 32 -6.32 81.13 +Sample_NN2901 DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 99 99 99 17 98 9.81 168.13 +Sample_NN2901 DEL chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 52 99 99 23 25 -7.38 13.03 +Sample_NN2901 DUP chr16:28607104-28621357 14.25 chr16 28614230 102275..102282 8 9 99 99 9 9 3.83 94.19 +Sample_NN2901 DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 5 98 99 5 23 -3.71 31.60 +Sample_NN2901 DUP chr17:18292171-18430160 137.99 chr17 18361165 109353..109365 13 3 98 99 2 3 3.12 66.95 +Sample_NN2901 DEL chr19:39225453-39229288 3.84 chr19 39227370 124394..124402 9 38 99 99 31 13 -4.99 32.76 +Sample_NN2901 DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 65 67 67 15 11 7.39 149.36 +Sample_NN2901 DUP chr21:47411924-47417397 5.47 chr21 47414660 134306..134311 6 11 66 66 12 7 3.50 104.85 +Sample_NN2901 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 6 37 37 6 36 4.55 91.51 +Sample_NN2901 DUP chr22:20383731-20461786 78.06 chr22 20422758 134919..134926 8 4 99 99 19 4 5.37 48.66 +Sample_NN2901 DEL chr22:23652511-23660223 7.71 chr22 23656367 135260..135265 6 17 74 74 20 17 -3.54 127.68 +Sample_NN2901 DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 15 99 99 5 5 -5.28 0.00 +Sample_NN2901 DUP chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 17 56 56 16 6 3.37 156.53 +Sample_NN2901 DEL chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 51 61 61 11 31 -5.44 6.31 +Sample_NN3506 DEL chr1:16918654-16946533 27.88 chr1 16932593 1956..1963 8 30 86 86 3 22 -3.20 55.85 +Sample_NN3506 DUP chr1:16954963-16976914 21.95 chr1 16965938 1965..1968 4 7 69 69 7 33 4.47 88.94 +Sample_NN3506 DUP chr1:17084437-17090975 6.54 chr1 17087706 1979..1986 8 25 99 99 10 31 4.70 82.17 +Sample_NN3506 DEL chr1:17250820-17272900 22.08 chr1 17261860 1989..2002 14 5 30 30 6 12 -2.20 48.70 +Sample_NN3506 DEL chr1:22328149-22334008 5.86 chr1 22331078 2731..2736 6 15 64 64 33 3 -3.45 15.74 +Sample_NN3506 DUP chr2:130896862-130897944 1.08 chr2 130897403 20149..20152 4 3 42 42 4 5 3.94 48.80 +Sample_NN3506 DEL chr3:48481686-48482038 0.35 chr3 48481862 27094..27096 3 9 31 31 30 3 -4.43 26.99 +Sample_NN3506 DUP chr3:48618315-48619192 0.88 chr3 48618753 27191..27196 6 15 45 45 14 10 3.25 63.80 +Sample_NN3506 DUP chr7:76142401-76631638 489.24 chr7 76387019 51082..51097 16 17 99 99 5 18 2.68 31.72 +Sample_NN3506 DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 33 99 99 30 0 -6.85 0.00 +Sample_NN3506 DUP chr8:12039614-12250923 211.31 chr8 12145268 55315..55320 6 10 75 99 0 9 5.97 57.87 +Sample_NN3506 DEL chr9:117072829-117087432 14.60 chr9 117080130 62578..62583 6 5 30 30 5 14 -3.04 21.47 +Sample_NN3506 DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 3 53 53 3 26 3.64 48.21 +Sample_NN3506 DUP chr12:9436253-9456803 20.55 chr12 9446528 81110..81121 12 10 30 30 10 18 2.31 28.97 +Sample_NN3506 DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 1 97 99 34 2 -2.53 14.87 +Sample_NN3506 DUP chr15:41853325-41871526 18.20 chr15 41862425 95370..95387 18 37 99 99 6 25 4.27 44.69 +Sample_NN3506 DEL chr16:3076517-3077281 0.77 chr16 3076899 100445..100449 5 2 52 52 4 3 -3.61 80.81 +Sample_NN3506 DUP chr17:18380099-18416772 36.67 chr17 18398435 109355..109363 9 5 84 84 6 2 2.98 39.82 +Sample_NN3506 DUP chr19:54724398-54726959 2.56 chr19 54725678 127862..127865 4 8 47 47 17 8 4.05 36.10 +Sample_NN3506 DUP chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 19 50 50 15 18 3.61 48.34 +Sample_NN3506 DEL chr21:45959068-46000481 41.41 chr21 45979774 134150..134155 6 15 39 39 21 16 -3.16 113.51 +Sample_NN3506 DUP chr22:24373117-24434909 61.79 chr22 24404013 135356..135367 12 2 42 42 7 2 2.37 27.32 +Sample_NN3506 DUP chr22:25041133-25044164 3.03 chr22 25042648 135493..135495 3 7 31 31 7 28 4.56 77.18 +Sample_NN3528 DUP chr1:14363-70008 55.65 chr1 42185 1..5 5 34 39 39 0 29 3.42 95.06 +Sample_NN3528 DEL chr1:763064-789740 26.68 chr1 776402 8..12 5 9 99 99 7 27 -6.48 3.65 +Sample_NN3528 DEL chr1:12851546-12976507 124.96 chr1 12914026 1602..1624 23 11 99 99 57 10 -4.92 38.50 +Sample_NN3528 DEL chr1:16972069-16975287 3.22 chr1 16973678 1966..1967 2 43 51 51 14 3 -6.74 173.98 +Sample_NN3528 DUP chr1:17087450-17275421 187.97 chr1 17181435 1985..2005 21 10 99 99 29 10 4.18 153.43 +Sample_NN3528 DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 29 99 99 32 10 -4.61 32.22 +Sample_NN3528 DEL chr1:152759754-152770656 10.90 chr1 152765205 9193..9194 2 26 38 38 21 29 -6.33 18.88 +Sample_NN3528 DUP chr1:161575849-161643019 67.17 chr1 161609434 11056..11062 7 11 61 61 14 11 3.21 70.16 +Sample_NN3528 DEL chr2:96697781-96698167 0.39 chr2 96697974 18726..18727 2 28 51 51 26 23 -6.61 0.00 +Sample_NN3528 DUP chr2:130806641-130897669 91.03 chr2 130852155 20144..20151 8 4 99 99 4 16 3.53 107.66 +Sample_NN3528 DUP chr3:195390957-195475935 84.98 chr3 195433446 32790..32802 13 9 98 99 3 11 3.15 98.77 +Sample_NN3528 DEL chr4:190903679-190906024 2.35 chr4 190904851 37228..37231 4 7 98 99 17 7 -6.22 72.68 +Sample_NN3528 DEL chr5:140213969-140238166 24.20 chr5 140226067 40584..40587 4 6 99 99 3 11 -5.32 77.92 +Sample_NN3528 DEL chr7:74306509-74312628 6.12 chr7 74309568 50916..50919 4 3 72 72 6 3 -4.39 41.89 +Sample_NN3528 DUP chr8:11979496-12291623 312.13 chr8 12135559 55311..55323 13 4 99 99 4 26 3.63 83.42 +Sample_NN3528 DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 15 97 99 3 18 -5.06 55.29 +Sample_NN3528 DEL chr9:135937365-135947248 9.88 chr9 135942306 64282..64292 11 29 99 99 23 27 -4.14 31.36 +Sample_NN3528 DUP chr10:135267432-135381779 114.35 chr10 135324605 70960..70987 28 35 99 99 24 24 4.18 90.06 +Sample_NN3528 DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 26 61 61 26 0 -3.39 30.66 +Sample_NN3528 DUP chr12:147946-149412 1.47 chr12 148679 79931..79932 2 20 42 42 0 41 6.32 128.97 +Sample_NN3528 DEL chr15:72954593-72958469 3.88 chr15 72956531 97496..97500 5 8 53 53 8 20 -3.70 42.51 +Sample_NN3528 DUP chr16:14968893-14972691 3.80 chr16 14970792 101188..101191 4 16 73 73 16 6 4.61 105.49 +Sample_NN3528 DEL chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 28 99 99 24 28 -4.53 33.42 +Sample_NN3528 DEL chr16:74442531-74444530 2.00 chr16 74443530 105291..105294 4 8 91 92 7 11 -4.97 90.27 +Sample_NN3528 DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 9 53 53 29 8 3.71 66.88 +Sample_NN3528 DUP chr19:43348511-43441330 92.82 chr19 43394920 125376..125392 17 10 99 99 6 17 5.02 92.44 +Sample_NN3528 DEL chr19:49519804-49527593 7.79 chr19 49523698 126638..126641 4 24 66 66 24 33 -4.48 93.38 +Sample_NN3528 DUP chr19:49539393-49547481 8.09 chr19 49543437 126647..126650 4 29 33 33 19 11 3.86 126.47 +Sample_NN3528 DEL chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 15 37 37 15 25 -4.78 57.33 +Sample_NN3528 DUP chr19:54745902-54746724 0.82 chr19 54746313 127867..127869 3 21 53 53 17 15 5.15 83.85 +Sample_NN3528 DUP chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 7 39 39 29 7 3.44 108.80 +Sample_NN3528 DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 30 31 10.00 114.63 +Sample_NN3528 DEL chr21:45970318-46032871 62.55 chr21 46001594 134151..134159 9 6 99 99 16 6 -3.35 265.45 +Sample_NN3528 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 18 45 7.48 140.59 +Sample_NN3528 DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 10 84 84 30 7 -3.37 19.87 +Sample_NN3528 DUP chr22:42905034-42952594 47.56 chr22 42928814 137453..137461 9 43 99 99 5 5 5.94 94.52 +Sample_NN3538 DUP chr1:1230098-1235448 5.35 chr1 1232773 194..206 13 7 41 41 7 9 2.31 108.85 +Sample_NN3538 DEL chr1:16918654-17275019 356.37 chr1 17096836 1956..2004 49 11 99 99 8 7 -3.22 106.85 +Sample_NN3538 DEL chr2:87140935-87141044 0.11 chr2 87140989 18559..18559 1 30 30 30 25 28 -10.00 49.23 +Sample_NN3538 DUP chr2:96689057-96689748 0.69 chr2 96689402 18718..18719 2 32 32 32 9 12 6.10 146.19 +Sample_NN3538 DUP chr2:128392171-128394203 2.03 chr2 128393187 20044..20048 5 27 57 57 20 16 3.77 112.94 +Sample_NN3538 DEL chr2:130806641-130899954 93.31 chr2 130853297 20144..20154 11 12 99 99 10 12 -3.06 56.68 +Sample_NN3538 DEL chr2:233244474-233246077 1.60 chr2 233245275 23900..23904 5 29 42 42 7 23 -3.52 120.83 +Sample_NN3538 DUP chr2:233272977-233274158 1.18 chr2 233273567 23912..23915 4 6 34 34 6 26 3.86 71.36 +Sample_NN3538 DUP chr3:46966946-47043316 76.37 chr3 47005131 26802..26833 32 4 99 99 4 11 2.06 100.11 +Sample_NN3538 DUP chr3:48604561-48607933 3.37 chr3 48606247 27137..27149 13 7 68 68 8 4 2.46 116.91 +Sample_NN3538 DUP chr3:50220619-50223781 3.16 chr3 50222200 27802..27808 7 44 61 61 13 16 3.18 105.77 +Sample_NN3538 DUP chr3:52549439-52554136 4.70 chr3 52551787 28414..28428 15 3 62 62 3 6 2.30 104.40 +Sample_NN3538 DEL chr5:140165876-140627799 461.92 chr5 140396837 40578..40611 34 10 99 99 9 23 -2.80 80.72 +Sample_NN3538 DEL chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 13 36 36 23 12 -3.81 51.23 +Sample_NN3538 DEL chr6:35754775-35787240 32.47 chr6 35771007 44052..44059 8 10 99 99 34 10 -3.91 69.25 +Sample_NN3538 DEL chr7:72476099-72649368 173.27 chr7 72562733 50674..50677 4 6 50 50 49 5 -4.36 30.18 +Sample_NN3538 DEL chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 47 49 49 21 16 -6.72 54.90 +Sample_NN3538 DEL chr8:7718168-7721318 3.15 chr8 7719743 55183..55184 2 40 42 42 12 4 -6.24 16.67 +Sample_NN3538 DEL chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 12 99 99 12 1 -5.79 33.62 +Sample_NN3538 DEL chr9:90744221-90747941 3.72 chr9 90746081 61295..61296 2 9 33 33 3 13 -6.01 62.61 +Sample_NN3538 DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 45 99 99 3 9 -5.40 50.58 +Sample_NN3538 DUP chr9:137709624-137710899 1.28 chr9 137710261 64594..64597 4 14 36 36 18 14 3.91 142.36 +Sample_NN3538 DEL chr10:92828-94665 1.84 chr10 93746 65442..65443 2 31 32 32 2 13 -6.10 197.87 +Sample_NN3538 DEL chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 33 33 33 22 29 -5.93 113.74 +Sample_NN3538 DUP chr10:46963840-47416976 453.14 chr10 47190408 66733..66744 12 8 99 99 6 17 3.66 105.61 +Sample_NN3538 DEL chr10:135368855-135370660 1.81 chr10 135369757 70976..70980 5 12 56 56 13 14 -3.75 123.92 +Sample_NN3538 DUP chr11:196761-239076 42.32 chr11 217918 70991..71017 27 3 99 99 4 3 4.67 100.14 +Sample_NN3538 DEL chr11:55032376-55038594 6.22 chr11 55035485 74018..74021 4 98 99 99 7 12 -7.66 0.43 +Sample_NN3538 DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 22 99 99 22 38 4.81 78.05 +Sample_NN3538 DEL chr15:21932514-22145802 213.29 chr15 22039158 94355..94359 5 13 68 68 13 8 -4.00 30.58 +Sample_NN3538 DUP chr15:23299681-23443575 143.90 chr15 23371628 94425..94437 13 3 69 69 3 10 2.51 64.54 +Sample_NN3538 DEL chr15:102513423-102514309 0.89 chr15 102513866 99267..99268 2 58 58 58 15 35 -7.11 1.66 +Sample_NN3538 DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 50 99 99 21 26 7.81 125.66 +Sample_NN3538 DEL chr16:1291154-1291700 0.55 chr16 1291427 99715..99716 2 46 48 48 26 46 -6.74 122.82 +Sample_NN3538 DEL chr16:16349577-16367932 18.36 chr16 16358754 101364..101368 5 14 75 75 4 14 -3.91 0.31 +Sample_NN3538 DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 15 79 79 16 17 -3.66 57.00 +Sample_NN3538 DUP chr16:67233587-67236298 2.71 chr16 67234942 104252..104263 12 5 56 56 3 2 2.43 112.45 +Sample_NN3538 DEL chr16:70154364-70220796 66.43 chr16 70187580 104880..104898 19 4 99 99 4 24 -2.88 31.57 +Sample_NN3538 DUP chr16:72097125-72111144 14.02 chr16 72104134 105210..105213 4 10 99 99 9 23 6.45 79.61 +Sample_NN3538 DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 6 99 99 6 16 -3.45 65.78 +Sample_NN3538 DUP chr16:88799015-88802816 3.80 chr16 88800915 106065..106072 8 7 81 81 9 7 3.16 108.93 +Sample_NN3538 DEL chr17:14139175-14140150 0.98 chr17 14139662 108886..108888 3 14 70 70 13 13 -5.40 71.35 +Sample_NN3538 DUP chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 45 98 99 3 42 6.92 136.00 +Sample_NN3538 DEL chr17:18387189-18430160 42.97 chr17 18408674 109356..109365 10 4 98 99 7 6 -3.33 39.32 +Sample_NN3538 DUP chr17:34591884-34592027 0.14 chr17 34591955 110587..110587 1 31 31 31 11 19 10.00 127.92 +Sample_NN3538 DEL chr17:39140079-39412615 272.54 chr17 39276347 111305..111332 28 4 99 99 6 7 -4.49 96.04 +Sample_NN3538 DEL chr17:43552466-44116052 563.59 chr17 43834259 112453..112480 28 1 32 32 2 3 -1.94 16.28 +Sample_NN3538 DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 5 90 92 23 3 -4.25 16.19 +Sample_NN3538 DUP chr19:40389652-40406060 16.41 chr19 40397856 124714..124720 7 24 99 99 7 22 3.81 91.96 +Sample_NN3538 DUP chr19:55247287-55294990 47.70 chr19 55271138 128016..128024 9 6 84 99 5 6 3.60 52.01 +Sample_NN3538 DEL chr21:31720717-31874408 153.69 chr21 31797562 133151..133161 11 11 46 46 10 10 -2.50 64.75 +Sample_NN3538 DEL chr21:45959068-46117959 158.89 chr21 46038513 134150..134167 18 15 99 99 15 6 -3.96 268.03 +Sample_NN3538 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 24 42 -8.85 37.76 +Sample_NN3538 DEL chr22:21043843-21068988 25.15 chr22 21056415 134963..134979 17 4 99 99 10 5 -2.41 91.62 +Sample_NN3752 DUP chr1:12851546-12854642 3.10 chr1 12853094 1602..1604 3 9 31 31 24 6 4.55 138.07 +Sample_NN3752 DEL chr1:16382917-16386099 3.18 chr1 16384508 1856..1859 4 8 72 72 8 7 -4.58 49.77 +Sample_NN3752 DUP chr1:16952270-17017789 65.52 chr1 16985029 1964..1969 6 3 68 68 14 3 3.54 187.52 +Sample_NN3752 DUP chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 27 95 95 32 17 6.04 214.46 +Sample_NN3752 DUP chr1:161494036-161565380 71.34 chr1 161529708 11047..11055 9 17 99 99 30 16 3.55 68.78 +Sample_NN3752 DUP chr3:48481506-48482038 0.53 chr3 48481772 27093..27096 4 4 45 45 17 4 4.00 115.56 +Sample_NN3752 DEL chr3:195390957-195475935 84.98 chr3 195433446 32790..32802 13 12 98 99 3 12 -4.83 46.09 +Sample_NN3752 DEL chr3:195701268-195711608 10.34 chr3 195706438 32844..32850 7 27 32 32 11 8 -2.86 55.22 +Sample_NN3752 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 76 99 99 14 18 6.72 148.97 +Sample_NN3752 DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 29 99 99 14 27 -6.12 43.04 +Sample_NN3752 DEL chr8:7153153-7320381 167.23 chr8 7236767 55171..55182 12 4 76 99 6 0 -3.87 19.17 +Sample_NN3752 DEL chr8:12245467-12287960 42.49 chr8 12266713 55318..55322 5 75 99 99 47 3 -5.84 27.86 +Sample_NN3752 DUP chr10:92828-94852 2.02 chr10 93840 65442..65444 3 28 49 49 49 15 5.03 199.55 +Sample_NN3752 DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 97 99 99 36 34 9.29 191.72 +Sample_NN3752 DEL chr11:60970984-60978907 7.92 chr11 60974945 74466..74468 3 27 76 76 30 17 -5.61 15.35 +Sample_NN3752 DEL chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 7 44 44 7 11 -3.53 66.01 +Sample_NN3752 DEL chr12:9436253-9456803 20.55 chr12 9446528 81110..81121 12 19 99 99 17 5 -3.06 28.56 +Sample_NN3752 DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 24 47 47 21 19 6.70 146.01 +Sample_NN3752 DEL chr15:43888606-43941039 52.43 chr15 43914822 95831..95857 27 23 99 99 29 23 -2.95 17.24 +Sample_NN3752 DUP chr15:78207982-78208271 0.29 chr15 78208126 98004..98005 2 37 52 52 6 32 6.82 273.26 +Sample_NN3752 DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 6 84 84 6 62 -4.73 23.96 +Sample_NN3752 DUP chr16:1290678-1291700 1.02 chr16 1291189 99714..99716 3 41 60 60 4 12 5.36 163.93 +Sample_NN3752 DUP chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 25 99 99 5 4 5.50 112.30 +Sample_NN3752 DUP chr16:55844839-55855433 10.60 chr16 55850136 103456..103461 6 8 54 54 3 12 3.32 69.91 +Sample_NN3752 DEL chr16:74385938-74452196 66.26 chr16 74419067 105286..105298 13 27 99 99 15 23 -3.10 51.91 +Sample_NN3752 DUP chr16:75562430-75575353 12.92 chr16 75568891 105406..105410 5 5 56 56 41 4 3.73 76.90 +Sample_NN3752 DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 10 46 46 12 10 -2.46 47.88 +Sample_NN3752 DUP chr17:39210753-39411837 201.09 chr17 39311295 111313..111331 19 14 98 99 5 6 2.65 149.94 +Sample_NN3752 DUP chr17:39533923-39538636 4.71 chr17 39536279 111347..111353 7 5 99 99 5 24 4.97 89.44 +Sample_NN3752 DUP chr17:76128422-76128589 0.17 chr17 76128505 115337..115338 2 48 48 48 25 4 6.64 201.72 +Sample_NN3752 DEL chr19:40380119-40408135 28.02 chr19 40394127 124711..124721 11 10 99 99 9 49 -3.21 42.11 +Sample_NN3752 DEL chr19:49535130-49539560 4.43 chr19 49537345 126643..126647 5 9 44 44 9 23 -3.56 34.94 +Sample_NN3752 DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 34 99 99 36 8 -5.87 2.72 +Sample_NN3752 DEL chr19:54784816-54803978 19.16 chr19 54794397 127894..127900 7 44 99 99 44 23 -5.74 46.08 +Sample_NN3752 DEL chr19:55247287-55266508 19.22 chr19 55256897 128016..128021 6 14 99 99 12 3 -4.60 9.84 +Sample_NN3752 DEL chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 30 -10.00 0.35 +Sample_NN3752 DUP chr21:45959068-46012386 53.32 chr21 45985727 134150..134156 7 30 99 99 26 27 4.69 329.79 +Sample_NN3752 DEL chr22:16256332-16279301 22.97 chr22 16267816 134510..134512 3 40 49 49 41 5 -4.84 29.34 +Sample_NN3752 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 35 27 8.99 130.82 +Sample_NN3752 DUP chr22:25041133-25055114 13.98 chr22 25048123 135493..135500 8 4 99 99 6 7 3.69 164.99 +Sample_NN6367 DEL chr1:1635263-1669887 34.62 chr1 1652575 371..380 10 3 99 99 9 2 -3.01 20.71 +Sample_NN6367 DUP chr1:12853352-12943231 89.88 chr1 12898291 1603..1619 17 38 72 72 8 16 2.29 75.10 +Sample_NN6367 DUP chr1:16954963-16976914 21.95 chr1 16965938 1965..1968 4 10 77 77 10 22 4.62 167.65 +Sample_NN6367 DUP chr1:17085971-17090975 5.00 chr1 17088473 1982..1986 5 41 73 73 5 67 3.89 124.29 +Sample_NN6367 DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 6 98 98 30 6 -3.87 23.06 +Sample_NN6367 DUP chr2:240981231-240985489 4.26 chr2 240983360 24411..24412 2 31 39 39 4 28 6.08 137.20 +Sample_NN6367 DUP chr3:195390957-195447954 57.00 chr3 195419455 32790..32797 8 17 98 99 17 45 4.92 80.67 +Sample_NN6367 DUP chr3:195701268-195702771 1.50 chr3 195702019 32844..32845 2 24 37 37 35 24 6.31 94.72 +Sample_NN6367 DUP chr5:140480234-140560019 79.79 chr5 140520126 40595..40601 7 8 99 99 3 10 4.12 105.57 +Sample_NN6367 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 79 99 99 4 27 6.60 122.42 +Sample_NN6367 DUP chr7:74306509-74306965 0.46 chr7 74306737 50916..50917 2 36 36 36 16 8 6.21 130.81 +Sample_NN6367 DUP chr7:76121470-76126794 5.33 chr7 76124132 51074..51075 2 35 42 42 22 27 6.47 68.78 +Sample_NN6367 DEL chr8:11979496-12041215 61.72 chr8 12010355 55311..55315 5 5 99 99 8 5 -4.86 24.97 +Sample_NN6367 DUP chr10:135267432-135381779 114.35 chr10 135324605 70960..70987 28 26 99 99 20 31 3.21 66.69 +Sample_NN6367 DEL chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 53 99 99 26 6 -3.96 20.82 +Sample_NN6367 DUP chr12:9580229-9590085 9.86 chr12 9585157 81143..81150 8 2 90 90 2 11 3.20 65.40 +Sample_NN6367 DUP chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 4 51 51 4 11 4.15 65.81 +Sample_NN6367 DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 15 99 99 43 15 -3.54 21.67 +Sample_NN6367 DUP chr15:41859558-41871526 11.97 chr15 41865542 95375..95387 13 9 63 63 3 9 2.39 62.47 +Sample_NN6367 DUP chr15:72958123-72958469 0.35 chr15 72958296 97499..97500 2 27 46 46 7 20 6.64 123.70 +Sample_NN6367 DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 75 97 99 22 26 6.31 78.23 +Sample_NN6367 DUP chr16:21475024-21531765 56.74 chr16 21503394 101744..101748 5 60 99 99 21 19 4.74 77.94 +Sample_NN6367 DUP chr16:28606871-28620649 13.78 chr16 28613760 102274..102281 8 4 30 30 6 5 2.67 83.09 +Sample_NN6367 DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 26 98 99 17 16 -4.56 25.86 +Sample_NN6367 DUP chr16:74442531-74444530 2.00 chr16 74443530 105291..105294 4 35 40 40 26 9 3.99 113.94 +Sample_NN6367 DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 22 98 99 19 26 3.50 70.77 +Sample_NN6367 DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 7 98 99 23 7 -3.17 30.43 +Sample_NN6367 DEL chr17:20404829-20407811 2.98 chr17 20406320 109572..109577 6 36 98 99 36 48 -5.71 28.95 +Sample_NN6367 DUP chr17:39190139-39406904 216.77 chr17 39298521 111310..111330 21 5 96 99 5 9 2.28 110.38 +Sample_NN6367 DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 24 95 97 21 21 4.38 73.70 +Sample_NN6367 DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 23 73 73 23 23 -5.63 51.29 +Sample_NN6367 DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 31 99 99 33 32 -5.01 1.46 +Sample_NN6367 DUP chr19:55239077-55266508 27.43 chr19 55252792 128015..128021 7 4 48 48 4 8 3.02 44.10 +Sample_NN6367 DEL chr21:10906743-10990920 84.18 chr21 10948831 132954..132974 21 1 70 70 3 3 -2.11 24.53 +Sample_NN6367 DUP chr21:45959068-46048294 89.23 chr21 46003681 134150..134160 11 11 99 99 19 11 3.18 231.17 +Sample_NN6367 DUP chr22:20383731-20461786 78.06 chr22 20422758 134919..134926 8 3 99 99 48 3 6.75 70.86 +Sample_NN6367 DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 4 99 99 4 13 3.55 47.99 +Sample_NN6367 DEL chr22:42905034-42950048 45.02 chr22 42927541 137453..137460 8 10 99 99 5 5 -3.73 29.59 +Sample_NN6368 DEL chr1:12851546-12958094 106.55 chr1 12904820 1602..1623 22 26 99 99 50 3 -3.78 26.62 +Sample_NN6368 DEL chr1:16952270-17046652 94.38 chr1 16999461 1964..1977 14 15 98 99 3 15 -3.43 37.34 +Sample_NN6368 DUP chr1:17248445-17275421 26.98 chr1 17261933 1987..2005 19 7 99 99 21 7 3.37 67.11 +Sample_NN6368 DUP chr1:104112026-104122147 10.12 chr1 104117086 7334..7341 8 23 99 99 6 16 3.38 47.06 +Sample_NN6368 DEL chr1:161575849-161601158 25.31 chr1 161588503 11056..11060 5 22 44 44 4 14 -3.47 16.92 +Sample_NN6368 DUP chr2:87140935-87141044 0.11 chr2 87140989 18559..18559 1 30 30 30 28 29 10.00 91.05 +Sample_NN6368 DEL chr2:240981231-240985489 4.26 chr2 240983360 24411..24412 2 33 57 57 11 31 -6.83 60.31 +Sample_NN6368 DEL chr3:75470705-75484266 13.56 chr3 75477485 29262..29269 8 15 99 99 80 15 -8.22 0.48 +Sample_NN6368 DUP chr3:195410623-195475935 65.31 chr3 195443279 32796..32802 7 20 42 42 2 37 2.96 61.11 +Sample_NN6368 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 56 99 99 10 20 -6.56 37.00 +Sample_NN6368 DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 6 68 68 7 6 -4.37 26.48 +Sample_NN6368 DUP chr9:117085303-117088757 3.46 chr9 117087030 62579..62584 6 24 99 99 18 21 8.08 84.92 +Sample_NN6368 DUP chr12:9436253-9456803 20.55 chr12 9446528 81110..81121 12 11 99 99 10 29 3.05 37.20 +Sample_NN6368 DUP chr15:21134198-21134625 0.43 chr15 21134411 94353..94354 2 50 73 73 20 29 7.39 62.51 +Sample_NN6368 DUP chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 25 99 99 62 25 5.45 60.50 +Sample_NN6368 DUP chr16:18542788-18604038 61.25 chr16 18573413 101381..101392 12 6 43 43 4 16 2.35 37.23 +Sample_NN6368 DUP chr16:21475024-21531765 56.74 chr16 21503394 101744..101748 5 39 44 44 3 35 3.47 44.55 +Sample_NN6368 DEL chr16:28606871-28621357 14.49 chr16 28614114 102274..102282 9 10 99 99 10 24 -3.46 33.62 +Sample_NN6368 DUP chr16:70162687-70211383 48.70 chr16 70187035 104882..104897 16 9 99 99 9 5 2.52 39.83 +Sample_NN6368 DUP chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 19 99 99 15 55 3.73 65.77 +Sample_NN6368 DEL chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 18 54 54 24 18 -4.14 23.77 +Sample_NN6368 DUP chr19:36604612-36605314 0.70 chr19 36604963 123971..123974 4 28 49 49 26 25 4.16 69.54 +Sample_NN6368 DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 21 99 99 30 10 5.75 50.99 +Sample_NN6368 DUP chr20:3734158-3739325 5.17 chr20 3736741 129196..129199 4 22 41 41 22 19 4.02 50.87 +Sample_NN6368 DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 6 99 99 6 6 -3.51 0.00 +Sample_NN6985 DUP chr1:12916941-12955703 38.76 chr1 12936322 1613..1622 10 2 30 30 24 2 2.44 83.62 +Sample_NN6985 DUP chr1:17084437-17086181 1.75 chr1 17085309 1979..1982 4 16 99 99 8 16 5.44 222.43 +Sample_NN6985 DUP chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 16 58 58 16 15 3.37 76.72 +Sample_NN6985 DUP chr1:104108057-104166606 58.55 chr1 104137331 7333..7345 13 6 99 99 25 6 4.48 75.97 +Sample_NN6985 DEL chr1:161483685-161565380 81.70 chr1 161524532 11046..11055 10 10 99 99 6 16 -3.94 28.95 +Sample_NN6985 DEL chr1:248524883-248637608 112.73 chr1 248581245 15083..15087 5 66 99 99 12 15 -5.35 81.99 +Sample_NN6985 DEL chr2:97860463-97911808 51.35 chr2 97886135 18984..19005 22 5 99 99 5 20 -2.46 18.98 +Sample_NN6985 DEL chr2:130897464-130897669 0.21 chr2 130897566 20150..20151 2 31 31 31 19 5 -6.01 66.70 +Sample_NN6985 DUP chr3:195392937-195395512 2.58 chr3 195394224 32791..32792 2 11 35 35 10 8 6.18 136.26 +Sample_NN6985 DUP chr5:837480-848775 11.30 chr5 843127 37332..37335 4 9 81 81 8 16 4.77 125.09 +Sample_NN6985 DUP chr7:72469994-72476455 6.46 chr7 72473224 50673..50674 2 61 67 67 31 21 7.21 143.06 +Sample_NN6985 DEL chr7:74299285-74312628 13.34 chr7 74305956 50913..50919 7 6 99 99 9 8 -4.15 45.35 +Sample_NN6985 DUP chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 12 48 48 4 3 2.99 70.84 +Sample_NN6985 DEL chr8:8088365-8094797 6.43 chr8 8091581 55186..55191 6 22 36 36 30 5 -3.11 103.51 +Sample_NN6985 DEL chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 14 99 99 20 14 -4.27 49.40 +Sample_NN6985 DUP chr8:12286142-12287960 1.82 chr8 12287051 55321..55322 2 14 38 38 27 14 6.31 117.84 +Sample_NN6985 DEL chr9:15909-17166 1.26 chr9 16537 59397..59398 2 37 37 37 37 0 -6.03 2.20 +Sample_NN6985 DUP chr9:178816-432324 253.51 chr9 305570 59399..59432 34 72 99 99 0 13 6.84 78.15 +Sample_NN6985 DUP chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 40 64 64 39 52 5.23 64.18 +Sample_NN6985 DUP chr10:47658234-47756732 98.50 chr10 47707483 66745..66767 23 14 99 99 14 32 3.54 83.99 +Sample_NN6985 DEL chr12:87984-90655 2.67 chr12 89319 79925..79930 6 42 99 99 86 8 -5.28 20.62 +Sample_NN6985 DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 48 99 99 15 62 8.76 166.96 +Sample_NN6985 DUP chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 37 53 53 24 40 4.24 85.79 +Sample_NN6985 DEL chr15:21932514-22371086 438.57 chr15 22151800 94355..94364 10 5 99 99 29 5 -3.74 48.50 +Sample_NN6985 DUP chr15:23299915-23443575 143.66 chr15 23371745 94426..94437 12 9 84 84 29 9 2.71 63.03 +Sample_NN6985 DUP chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 10 73 73 10 72 4.54 82.85 +Sample_NN6985 DEL chr16:1290678-1291700 1.02 chr16 1291189 99714..99716 3 58 96 99 17 11 -6.29 96.44 +Sample_NN6985 DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 13 98 99 4 38 -4.49 40.55 +Sample_NN6985 DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 64 64 16 5 2.58 81.61 +Sample_NN6985 DEL chr17:25969264-25972375 3.11 chr17 25970819 109649..109651 3 63 91 92 4 15 -6.10 57.50 +Sample_NN6985 DUP chr17:79862942-79864422 1.48 chr17 79863682 116024..116028 5 9 34 34 8 18 3.40 132.94 +Sample_NN6985 DUP chr19:12500831-12577664 76.83 chr19 12539247 121267..121272 6 15 99 99 24 15 4.16 71.07 +Sample_NN6985 DEL chr19:40389652-40408135 18.48 chr19 40398893 124714..124721 8 4 99 99 12 5 -4.38 50.87 +Sample_NN6985 DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 99 99 99 24 18 -10.00 75.59 +Sample_NN6985 DEL chr19:54724025-54746724 22.70 chr19 54735374 127861..127869 9 55 99 99 7 9 -3.56 35.07 +Sample_NN6985 DUP chr19:55247438-55327989 80.55 chr19 55287713 128017..128026 10 21 99 99 6 5 4.21 60.70 +Sample_NN6985 DEL chr22:22980494-22990368 9.88 chr22 22985431 135216..135223 8 5 93 94 3 30 -3.19 93.56 +Sample_NN6985 DUP chr22:23652511-23654023 1.51 chr22 23653267 135260..135261 2 47 68 68 15 8 7.47 244.00 +Sample_NN6985 DEL chr22:25016295-25055114 38.82 chr22 25035704 135482..135500 19 16 99 99 5 18 -3.08 93.50 +Sample_NN6985 DEL chr22:39378405-39388154 9.75 chr22 39383279 136949..136955 7 24 99 99 11 13 -3.63 24.88 +Sample_NN6985 DUP chr22:42898755-42911274 12.52 chr22 42905014 137451..137458 8 4 99 99 4 23 3.51 79.20 +Sample_NN6985 DUP chrX:148614417-148619310 4.89 chrX 148616863 141590..141591 2 39 46 46 32 30 6.66 97.37 +Sample_NN6986 DUP chr1:1633047-1670496 37.45 chr1 1651771 369..381 13 14 44 44 5 21 2.33 33.93 +Sample_NN6986 DUP chr1:16946340-16972173 25.83 chr1 16959256 1963..1966 4 10 33 33 9 26 3.87 112.81 +Sample_NN6986 DUP chr3:50326686-50327517 0.83 chr3 50327101 27871..27874 4 17 44 44 17 13 4.06 93.64 +Sample_NN6986 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 12 82 82 12 6 4.11 80.71 +Sample_NN6986 DUP chr7:74197282-74306965 109.68 chr7 74252123 50910..50917 8 43 99 99 5 7 4.99 72.72 +Sample_NN6986 DEL chr7:74573672-74578824 5.15 chr7 74576248 50925..50926 2 35 63 63 7 18 -6.99 25.29 +Sample_NN6986 DUP chr8:11979496-12044126 64.63 chr8 12011811 55311..55316 6 19 99 99 28 8 4.48 63.45 +Sample_NN6986 DEL chr8:12245467-12291623 46.16 chr8 12268545 55318..55323 6 2 99 99 8 2 -4.77 10.35 +Sample_NN6986 DUP chr9:117072829-117088757 15.93 chr9 117080793 62578..62584 7 13 99 99 9 9 7.31 82.06 +Sample_NN6986 DEL chr10:46965715-47133836 168.12 chr10 47049775 66734..66742 9 6 99 99 6 14 -4.03 41.16 +Sample_NN6986 DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 15 99 99 11 35 -4.66 20.53 +Sample_NN6986 DUP chr15:20743914-22145802 1401.89 chr15 21444858 94345..94359 15 30 99 99 86 6 4.87 47.05 +Sample_NN6986 DUP chr15:23282265-23300167 17.90 chr15 23291216 94424..94426 3 4 99 99 4 39 6.82 103.58 +Sample_NN6986 DUP chr15:23443500-23444098 0.60 chr15 23443799 94437..94438 2 12 43 43 9 42 6.23 91.74 +Sample_NN6986 DUP chr16:18532087-18604038 71.95 chr16 18568062 101380..101392 13 48 99 99 53 38 5.01 53.53 +Sample_NN6986 DUP chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 3 61 61 3 13 2.87 40.70 +Sample_NN6986 DEL chr16:55806281-55808824 2.54 chr16 55807552 103453..103454 2 42 54 54 7 6 -6.76 0.00 +Sample_NN6986 DUP chr16:55844839-55857595 12.76 chr16 55851217 103456..103462 7 15 99 99 5 4 4.73 51.69 +Sample_NN6986 DEL chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 19 97 99 23 13 -4.43 16.40 +Sample_NN6986 DUP chr16:74442531-74452196 9.67 chr16 74447363 105291..105298 8 10 99 99 5 10 5.29 82.54 +Sample_NN6986 DUP chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 21 54 54 20 27 2.51 45.76 +Sample_NN6986 DEL chr19:55263819-55361964 98.15 chr19 55312891 128020..128034 15 5 79 79 4 17 -2.42 9.50 +Sample_NN6986 DUP chr21:14982498-14983070 0.57 chr21 14982784 132983..132983 1 31 31 31 31 31 10.00 63.74 +Sample_NN6986 DUP chr21:45959068-46020655 61.59 chr21 45989861 134150..134157 8 15 50 50 15 32 2.90 161.58 +Sample_NN6986 DUP chr22:23651611-23655208 3.60 chr22 23653409 135259..135262 4 5 32 32 5 29 3.80 107.19 +Sample_NN6986 DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 12 99 99 8 5 -4.78 0.07 +Sample_NN7021 DUP chr1:69091-70008 0.92 chr1 69549 5..5 1 32 32 32 5 32 10.00 58.81 +Sample_NN7021 DEL chr1:12907236-12946025 38.79 chr1 12926630 1610..1620 11 11 99 99 25 10 -3.51 18.57 +Sample_NN7021 DUP chr1:16900982-16935274 34.29 chr1 16918128 1946..1960 15 19 99 99 14 11 2.77 60.31 +Sample_NN7021 DUP chr1:17017713-17085663 67.95 chr1 17051688 1969..1981 13 36 99 99 36 7 3.32 57.88 +Sample_NN7021 DUP chr1:17250820-17257892 7.07 chr1 17254356 1989..1994 6 8 57 57 4 10 3.35 83.89 +Sample_NN7021 DUP chr1:104108057-104122147 14.09 chr1 104115102 7333..7341 9 3 36 36 4 4 2.54 33.02 +Sample_NN7021 DEL chr3:48608534-48610781 2.25 chr3 48609657 27152..27162 11 4 31 31 3 5 -2.35 48.99 +Sample_NN7021 DEL chr8:145540850-145541832 0.98 chr8 145541341 59140..59146 7 7 36 36 3 11 -2.88 64.88 +Sample_NN7021 DUP chr9:15909-17166 1.26 chr9 16537 59397..59398 2 86 99 99 85 27 9.07 59.18 +Sample_NN7021 DEL chr9:135937365-135947248 9.88 chr9 135942306 64282..64292 11 6 84 85 15 6 -2.73 13.73 +Sample_NN7021 DEL chr15:23311307-23444098 132.79 chr15 23377702 94428..94438 11 14 67 67 6 47 -2.63 12.54 +Sample_NN7021 DEL chr16:3075925-3077074 1.15 chr16 3076499 100441..100448 8 11 40 40 11 11 -2.77 70.37 +Sample_NN7021 DEL chr16:18584199-18604038 19.84 chr16 18594118 101386..101392 7 22 99 99 34 22 -4.04 12.45 +Sample_NN7021 DEL chr16:28607104-28620649 13.55 chr16 28613876 102275..102281 7 13 44 44 20 13 -3.00 28.18 +Sample_NN7021 DUP chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 11 32 32 14 14 3.35 44.18 +Sample_NN7021 DUP chr16:70162687-70220796 58.11 chr16 70191741 104882..104898 17 8 98 99 15 9 2.56 37.20 +Sample_NN7021 DUP chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 37 99 99 6 32 4.40 67.31 +Sample_NN7021 DEL chr17:48266529-48272691 6.16 chr17 48269610 112931..112952 22 3 41 41 3 7 -2.00 46.04 +Sample_NN7021 DEL chr19:55105662-55105941 0.28 chr19 55105801 127980..127981 2 12 37 37 5 12 -6.25 57.16 +Sample_NN7021 DUP chr19:55315346-55361964 46.62 chr19 55338655 128025..128034 10 2 34 34 2 32 2.46 26.52 +Sample_NN7021 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 39 33 9.07 89.52 +Sample_NN7022 DEL chr1:12851546-12891264 39.72 chr1 12871405 1602..1609 8 14 99 99 15 7 -4.07 39.90 +Sample_NN7022 DEL chr1:12941675-13001395 59.72 chr1 12971535 1618..1625 8 8 82 82 16 4 -3.15 13.61 +Sample_NN7022 DUP chr1:16914220-17033914 119.69 chr1 16974067 1953..1974 22 14 99 99 36 5 5.06 99.39 +Sample_NN7022 DUP chr1:161575849-161643019 67.17 chr1 161609434 11056..11062 7 34 72 72 29 33 3.34 44.78 +Sample_NN7022 DEL chr5:819640-843839 24.20 chr5 831739 37329..37334 6 16 68 68 16 6 -3.53 28.58 +Sample_NN7022 DEL chr5:21495207-21497349 2.14 chr5 21496278 37853..37854 2 14 40 40 14 6 -6.33 9.79 +Sample_NN7022 DUP chr6:35754775-35773859 19.09 chr6 35764317 44052..44057 6 2 49 49 4 5 3.24 78.73 +Sample_NN7022 DEL chr7:74303804-74312628 8.82 chr7 74308216 50915..50919 5 2 99 99 3 3 -4.33 19.63 +Sample_NN7022 DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 51 99 99 36 17 -8.26 6.32 +Sample_NN7022 DUP chr8:7308087-7721318 413.23 chr8 7514702 55180..55184 5 14 99 99 14 9 5.12 55.18 +Sample_NN7022 DUP chr8:11985367-12291623 306.26 chr8 12138495 55312..55323 12 30 99 99 9 23 5.17 67.67 +Sample_NN7022 DUP chr9:117085943-117088757 2.81 chr9 117087350 62580..62584 5 8 99 99 11 7 4.74 55.89 +Sample_NN7022 DUP chr10:135270783-135381779 111.00 chr10 135326281 70962..70987 26 34 99 99 6 28 3.47 51.39 +Sample_NN7022 DUP chr16:1279191-1280185 0.99 chr16 1279688 99711..99713 3 40 98 99 15 33 6.35 60.89 +Sample_NN7022 DEL chr16:32888797-32896463 7.67 chr16 32892630 103097..103104 8 3 70 70 47 3 -2.97 18.00 +Sample_NN7022 DUP chr16:69988237-69997887 9.65 chr16 69993062 104858..104860 3 20 62 62 26 19 5.32 56.26 +Sample_NN7022 DUP chr16:70154364-70220796 66.43 chr16 70187580 104880..104898 19 5 65 65 6 17 2.16 39.99 +Sample_NN7022 DUP chr16:74446671-74452196 5.53 chr16 74449433 105296..105298 3 17 99 99 42 16 6.84 91.12 +Sample_NN7022 DUP chr17:16675291-16736147 60.86 chr17 16705719 109039..109050 12 18 82 82 15 23 2.62 46.21 +Sample_NN7022 DEL chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 33 44 44 13 23 -4.89 0.52 +Sample_NN7022 DEL chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 15 99 99 14 18 -4.50 9.73 +Sample_NN7022 DEL chr19:41349444-41381779 32.34 chr19 41365611 124955..124964 10 11 54 54 12 11 -2.65 19.27 +Sample_NN7022 DUP chr19:43348511-43441330 92.82 chr19 43394920 125376..125392 17 13 99 99 12 8 4.41 52.77 +Sample_NN7022 DEL chr19:43708038-43763287 55.25 chr19 43735662 125407..125410 4 57 99 99 46 15 -5.47 0.19 +Sample_NN7022 DUP chr19:49517741-49527593 9.85 chr19 49522667 126633..126641 9 8 90 90 5 28 3.04 69.46 +Sample_NN7022 DEL chr19:49547102-49552368 5.27 chr19 49549735 126650..126652 3 41 49 49 24 26 -5.00 51.14 +Sample_NN7022 DEL chr22:24656876-24658575 1.70 chr22 24657725 135429..135430 2 11 35 35 14 11 -6.21 98.28 +Sample_NN7022 DUP chr22:42905034-42952594 47.56 chr22 42928814 137453..137461 9 38 99 99 35 14 5.06 55.86 +Sample_NN7123 DEL chr1:16809782-16811401 1.62 chr1 16810591 1936..1937 2 43 57 57 19 33 -7.07 34.84 +Sample_NN7123 DEL chr1:16918342-17017789 99.45 chr1 16968065 1955..1969 15 12 99 99 3 8 -3.95 118.33 +Sample_NN7123 DUP chr1:17084437-17086502 2.07 chr1 17085469 1979..1983 5 8 80 80 9 12 4.10 173.06 +Sample_NN7123 DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 19 99 99 21 16 -4.30 24.64 +Sample_NN7123 DUP chr1:248524883-248637608 112.73 chr1 248581245 15083..15087 5 24 34 34 18 20 3.43 128.34 +Sample_NN7123 DEL chr2:130806641-130878181 71.54 chr2 130842411 20144..20148 5 6 35 35 6 20 -3.42 49.47 +Sample_NN7123 DEL chr3:48613300-48614204 0.91 chr3 48613752 27173..27177 5 10 39 39 3 16 -3.46 111.55 +Sample_NN7123 DEL chr3:48618881-48620086 1.21 chr3 48619483 27194..27200 7 30 68 68 9 17 -3.25 131.26 +Sample_NN7123 DEL chr3:49723495-49725101 1.61 chr3 49724298 27605..27611 7 14 92 93 7 18 -3.52 176.00 +Sample_NN7123 DUP chr3:75476578-75484266 7.69 chr3 75480422 29264..29269 6 7 98 99 7 7 3.91 119.74 +Sample_NN7123 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 70 99 99 10 15 -6.60 69.95 +Sample_NN7123 DEL chr7:72476099-72717737 241.64 chr7 72596918 50674..50680 7 5 37 37 11 5 -3.06 50.99 +Sample_NN7123 DUP chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 13 34 34 31 9 3.81 79.33 +Sample_NN7123 DUP chr9:40715524-40792112 76.59 chr9 40753818 60793..60796 4 53 99 99 53 91 5.39 86.84 +Sample_NN7123 DEL chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 30 30 30 29 13 -4.35 0.05 +Sample_NN7123 DUP chr10:46963840-47416976 453.14 chr10 47190408 66733..66744 12 6 78 78 7 8 2.73 103.73 +Sample_NN7123 DUP chr11:197297-233215 35.92 chr11 215256 70992..71014 23 12 99 99 12 4 4.88 99.05 +Sample_NN7123 DEL chr11:64568236-64569593 1.36 chr11 64568914 75402..75407 6 14 34 34 9 16 -3.10 102.31 +Sample_NN7123 DUP chr12:87984-90655 2.67 chr12 89319 79925..79930 6 89 99 99 85 43 6.67 93.47 +Sample_NN7123 DEL chr12:8376612-8385203 8.59 chr12 8380907 80973..80976 4 25 45 45 8 17 -4.06 73.34 +Sample_NN7123 DUP chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 63 86 86 43 22 8.21 147.75 +Sample_NN7123 DUP chr15:20743914-20776177 32.26 chr15 20760045 94345..94349 5 4 48 48 32 4 3.62 70.14 +Sample_NN7123 DUP chr15:22145703-22414393 268.69 chr15 22280048 94359..94366 8 10 99 99 15 10 4.18 90.51 +Sample_NN7123 DUP chr15:23444007-23444098 0.09 chr15 23444052 94438..94438 1 31 31 31 29 30 10.00 176.67 +Sample_NN7123 DEL chr15:74362198-74368131 5.93 chr15 74365164 97607..97610 4 3 44 44 4 10 -3.91 15.50 +Sample_NN7123 DUP chr15:78206559-78212453 5.89 chr15 78209506 98002..98011 10 7 99 99 23 7 3.68 153.60 +Sample_NN7123 DEL chr16:223124-223708 0.58 chr16 223416 99316..99317 2 69 94 96 47 3 -8.43 0.00 +Sample_NN7123 DUP chr16:72093013-72111144 18.13 chr16 72102078 105208..105213 6 27 99 99 23 21 6.18 75.70 +Sample_NN7123 DUP chr17:16675291-16736147 60.86 chr17 16705719 109039..109050 12 6 98 99 5 29 3.80 77.81 +Sample_NN7123 DEL chr17:18392255-18430160 37.91 chr17 18411207 109358..109365 8 10 98 99 6 10 -3.79 36.10 +Sample_NN7123 DUP chr17:20355108-20358711 3.60 chr17 20356909 109567..109569 3 26 34 34 19 9 4.64 61.55 +Sample_NN7123 DEL chr17:39261641-39280419 18.78 chr17 39271030 111317..111319 3 26 30 30 9 4 -4.42 132.71 +Sample_NN7123 DEL chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 18 55 55 38 17 -3.75 24.83 +Sample_NN7123 DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 12 75 75 12 17 4.03 74.22 +Sample_NN7123 DEL chr19:50462617-50464192 1.58 chr19 50463404 127078..127080 3 46 99 99 27 14 -7.37 26.63 +Sample_NN7123 DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 99 99 99 14 24 10.00 197.14 +Sample_NN7123 DEL chr19:54726815-54746724 19.91 chr19 54736769 127865..127869 5 4 88 99 4 19 -4.49 28.11 +Sample_NN7123 DUP chr19:55247287-55267601 20.32 chr19 55257444 128016..128022 7 7 99 99 10 5 4.14 57.19 +Sample_NN7123 DEL chr22:21057756-21067678 9.92 chr22 21062717 134967..134977 11 6 54 54 16 6 -2.53 80.52 +Sample_NN7123 DUP chr22:23653884-23655208 1.32 chr22 23654546 135261..135262 2 6 30 30 30 6 5.99 305.38 +Sample_NN7123 DEL chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 14 99 99 14 17 -5.13 125.74 +Sample_NN7123 DEL chrX:140786599-140786655 0.06 chrX 140786627 141532..141532 1 33 33 33 4 24 -10.00 9.07 +Sample_NN7123 DUP chrX:148626914-148628854 1.94 chrX 148627884 141596..141598 3 5 42 42 33 5 4.67 120.14 +Sample_NN7124 DEL chr1:12888357-12946025 57.67 chr1 12917191 1608..1620 13 8 99 99 15 8 -4.29 35.62 +Sample_NN7124 DUP chr1:16914220-16955145 40.93 chr1 16934682 1953..1965 13 13 89 89 14 9 2.59 135.14 +Sample_NN7124 DEL chr1:17084437-17263368 178.93 chr1 17173902 1979..1995 17 3 99 99 6 3 -5.24 89.25 +Sample_NN7124 DUP chr2:96688883-96689748 0.87 chr2 96689315 18717..18719 3 7 42 42 7 7 4.80 115.33 +Sample_NN7124 DEL chr2:97860582-97884983 24.40 chr2 97872782 18985..19004 20 4 50 50 5 5 -2.06 17.31 +Sample_NN7124 DEL chr2:233244896-233246077 1.18 chr2 233245486 23901..23904 4 8 99 99 8 14 -5.32 52.56 +Sample_NN7124 DUP chr2:233272977-233274158 1.18 chr2 233273567 23912..23915 4 12 97 99 8 21 5.14 57.41 +Sample_NN7124 DEL chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 18 98 99 17 40 -4.65 40.39 +Sample_NN7124 DEL chr7:74303804-74312628 8.82 chr7 74308216 50915..50919 5 8 99 99 29 5 -4.80 26.37 +Sample_NN7124 DUP chr7:76142401-76633624 491.22 chr7 76388012 51082..51098 17 27 99 99 8 13 2.82 58.55 +Sample_NN7124 DUP chr7:143400074-143530976 130.90 chr7 143465525 54217..54219 3 14 37 37 14 21 4.81 44.55 +Sample_NN7124 DUP chr8:8088365-8090396 2.03 chr8 8089380 55186..55187 2 31 40 40 31 4 6.32 123.81 +Sample_NN7124 DEL chr8:11985367-12044342 58.98 chr8 12014854 55312..55317 6 3 36 36 11 4 -3.05 48.83 +Sample_NN7124 DEL chr10:135369284-135370326 1.04 chr10 135369805 70977..70979 3 31 50 50 34 26 -5.07 130.38 +Sample_NN7124 DUP chr12:8071825-8086498 14.67 chr12 8079161 80932..80940 9 23 77 77 22 32 2.91 45.54 +Sample_NN7124 DEL chr15:20743914-22414393 1670.48 chr15 21579153 94345..94366 22 13 99 99 32 13 -3.50 26.92 +Sample_NN7124 DEL chr15:23261763-23444098 182.34 chr15 23352930 94422..94438 17 8 99 99 8 49 -2.99 36.52 +Sample_NN7124 DEL chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 64 99 99 4 96 -7.19 17.53 +Sample_NN7124 DEL chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 7 46 46 33 6 -3.22 49.29 +Sample_NN7124 DUP chr16:69988237-69997887 9.65 chr16 69993062 104858..104860 3 15 45 45 3 15 4.80 79.78 +Sample_NN7124 DEL chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 48 49 49 22 14 -6.77 70.29 +Sample_NN7124 DUP chr17:15635591-15640837 5.25 chr17 15638214 108932..108935 4 10 35 35 9 4 3.86 89.29 +Sample_NN7124 DUP chr17:18380099-18391071 10.97 chr17 18385585 109355..109357 3 6 35 35 34 6 4.66 86.58 +Sample_NN7124 DEL chr17:18542488-18545046 2.56 chr17 18543767 109373..109375 3 21 53 53 6 3 -5.03 77.69 +Sample_NN7124 DUP chr17:34591884-34592027 0.14 chr17 34591955 110587..110587 1 31 31 31 22 10 10.00 135.63 +Sample_NN7124 DEL chr17:39388715-39395255 6.54 chr17 39391985 111327..111329 3 71 99 99 32 33 -8.99 63.61 +Sample_NN7124 DEL chr19:54722632-54726002 3.37 chr19 54724317 127860..127864 5 17 99 99 3 13 -4.55 22.42 +Sample_NN7124 DUP chr19:54783646-54803978 20.33 chr19 54793812 127891..127900 10 12 99 99 8 19 3.15 99.22 +Sample_NN7124 DUP chr22:39427699-39441547 13.85 chr22 39434623 136965..136971 7 26 99 99 25 20 3.75 61.40 +Sample_NN7139 DEL chr1:16918342-16946533 28.19 chr1 16932437 1955..1963 9 30 99 99 4 11 -4.59 104.48 +Sample_NN7139 DEL chr1:17017713-17275421 257.71 chr1 17146567 1969..2005 37 5 99 99 52 5 -4.58 62.36 +Sample_NN7139 DUP chr5:795720-825366 29.65 chr5 810543 37326..37330 5 26 92 93 26 31 4.33 71.06 +Sample_NN7139 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 70 99 99 29 21 -5.09 71.41 +Sample_NN7139 DEL chr7:74197282-74203048 5.77 chr7 74200165 50910..50912 3 10 88 88 38 10 -5.86 44.43 +Sample_NN7139 DUP chr7:74573056-75044301 471.25 chr7 74808678 50924..50929 6 14 99 99 21 9 4.81 90.34 +Sample_NN7139 DEL chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 20 99 99 13 8 -4.57 19.70 +Sample_NN7139 DEL chr8:12245467-12287960 42.49 chr8 12266713 55318..55322 5 10 99 99 36 10 -5.26 32.70 +Sample_NN7139 DUP chr11:811597-811814 0.22 chr11 811705 71297..71298 2 37 38 38 14 14 6.32 160.44 +Sample_NN7139 DEL chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 13 46 46 12 39 -3.59 60.39 +Sample_NN7139 DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 20 81 81 37 19 3.80 65.17 +Sample_NN7139 DUP chr15:41857224-41871526 14.30 chr15 41864375 95374..95387 14 2 34 34 1 9 2.16 65.99 +Sample_NN7139 DEL chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 56 99 99 14 25 -6.65 137.19 +Sample_NN7139 DEL chr16:14988855-15123913 135.06 chr16 15056384 101197..101213 17 21 99 99 9 23 -4.54 32.90 +Sample_NN7139 DEL chr16:28608318-28621357 13.04 chr16 28614837 102276..102282 7 7 99 99 10 4 -4.07 46.36 +Sample_NN7139 DUP chr16:69988237-69997887 9.65 chr16 69993062 104858..104860 3 19 34 34 7 17 4.58 70.89 +Sample_NN7139 DEL chr16:74442531-74444932 2.40 chr16 74443731 105291..105295 5 21 59 59 15 22 -3.80 58.78 +Sample_NN7139 DEL chr17:20355108-20363756 8.65 chr17 20359432 109567..109571 5 5 90 91 6 2 -4.15 12.49 +Sample_NN7139 DEL chr17:60342069-60345600 3.53 chr17 60343834 113673..113676 4 3 42 42 4 12 -3.98 53.22 +Sample_NN7139 DEL chr19:49557532-49558997 1.47 chr19 49558264 126653..126655 3 20 40 40 21 24 -4.77 58.55 +Sample_NN7139 DEL chr19:54724025-54726002 1.98 chr19 54725013 127861..127864 4 8 77 79 21 1 -4.94 15.36 +Sample_NN7139 DEL chr19:54784318-54803978 19.66 chr19 54794148 127893..127900 8 30 99 99 3 16 -3.80 58.15 +Sample_NN7139 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 5 49 49 5 33 -4.84 45.53 +Sample_NN7139 DUP chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 23 99 99 7 15 4.13 43.21 +Sample_NN7139 DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 10 99 99 17 9 4.08 46.51 +Sample_NN7139 DUP chr22:42898755-42952594 53.84 chr22 42925674 137451..137461 11 28 99 99 33 7 3.89 67.02 +Sample_NN7139 DUP chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 41 99 99 26 10 6.89 69.51 +Sample_NN7139 DUP chrX:148626914-148627429 0.52 chrX 148627171 141596..141597 2 99 99 99 6 19 10.00 171.69 +Sample_NN7139 DEL chrX:149101840-149102355 0.52 chrX 149102097 141611..141612 2 99 99 99 40 4 -10.00 7.79 +Sample_NN7140 DEL chr1:14363-70008 55.65 chr1 42185 1..5 5 46 99 99 0 49 -4.93 31.43 +Sample_NN7140 DEL chr1:12916941-12955703 38.76 chr1 12936322 1613..1622 10 30 99 99 9 32 -3.37 27.88 +Sample_NN7140 DUP chr1:17087450-17090975 3.53 chr1 17089212 1985..1986 2 35 38 38 3 21 5.98 190.90 +Sample_NN7140 DEL chr1:17256781-17277617 20.84 chr1 17267199 1992..2006 15 3 99 99 7 3 -2.73 73.51 +Sample_NN7140 DEL chr1:25611064-25633220 22.16 chr1 25622142 3041..3046 6 15 99 99 12 11 -3.99 24.19 +Sample_NN7140 DEL chr1:248737102-248814185 77.08 chr1 248775643 15089..15093 5 10 51 51 13 10 -3.67 27.54 +Sample_NN7140 DEL chr3:129816625-129824474 7.85 chr3 129820549 30788..30792 5 20 65 65 13 20 -3.88 80.87 +Sample_NN7140 DUP chr4:119199914-119475357 275.44 chr4 119337635 36087..36104 18 26 98 99 17 46 2.71 44.37 +Sample_NN7140 DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 61 84 85 13 21 8.13 137.86 +Sample_NN7140 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 55 99 99 30 26 -5.67 57.69 +Sample_NN7140 DUP chr7:72418838-72420735 1.90 chr7 72419786 50664..50669 6 15 99 99 7 14 4.62 108.42 +Sample_NN7140 DEL chr7:75044163-75048176 4.01 chr7 75046169 50929..50934 6 12 94 96 9 11 -3.88 37.18 +Sample_NN7140 DUP chr8:7305276-7320381 15.11 chr8 7312828 55179..55182 4 3 67 87 32 0 4.71 53.39 +Sample_NN7140 DEL chr8:7718168-7721318 3.15 chr8 7719743 55183..55184 2 35 35 35 3 4 -6.00 15.27 +Sample_NN7140 DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 9 96 99 29 9 -5.06 22.82 +Sample_NN7140 DUP chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 25 99 99 22 23 6.25 69.69 +Sample_NN7140 DUP chr9:43624504-43630730 6.23 chr9 43627617 60802..60804 3 52 66 66 49 65 5.27 49.53 +Sample_NN7140 DUP chr9:117085303-117087432 2.13 chr9 117086367 62579..62583 5 23 99 99 4 23 7.12 89.21 +Sample_NN7140 DUP chr11:66332029-66332477 0.45 chr11 66332253 76163..76165 3 9 35 35 6 9 4.62 131.25 +Sample_NN7140 DUP chr12:9436253-9456803 20.55 chr12 9446528 81110..81121 12 7 99 99 3 24 2.78 51.51 +Sample_NN7140 DEL chr12:11034816-11035297 0.48 chr12 11035056 81234..81235 2 33 53 53 14 19 -6.94 47.31 +Sample_NN7140 DUP chr14:20215587-20404761 189.18 chr14 20310174 90042..90047 6 75 99 99 38 23 7.95 86.72 +Sample_NN7140 DEL chr15:23261763-23316186 54.42 chr15 23288974 94422..94432 11 9 75 75 22 5 -2.70 37.53 +Sample_NN7140 DUP chr15:78207740-78208271 0.53 chr15 78208005 98003..98005 3 6 33 33 23 7 4.60 186.29 +Sample_NN7140 DEL chr16:28618272-28621357 3.09 chr16 28619814 102279..102282 4 17 48 48 10 9 -4.09 52.25 +Sample_NN7140 DEL chr16:32163770-32896463 732.69 chr16 32530116 103096..103104 9 33 99 99 10 34 -4.83 26.13 +Sample_NN7140 DUP chr16:74394531-74447574 53.04 chr16 74421052 105289..105297 9 4 98 99 2 4 4.64 102.95 +Sample_NN7140 DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 6 98 99 30 6 -3.13 33.73 +Sample_NN7140 DUP chr19:40373945-40382826 8.88 chr19 40378385 124708..124712 5 4 40 40 13 4 3.48 51.77 +Sample_NN7140 DEL chr19:43586658-43709790 123.13 chr19 43648224 125400..125408 9 3 99 99 3 9 -3.68 26.09 +Sample_NN7140 DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 32 99 99 18 17 -4.97 41.56 +Sample_NN7140 DUP chr22:20385726-20398336 12.61 chr22 20392031 134920..134925 6 11 50 50 11 11 3.24 40.38 +Sample_NN7140 DUP chr22:22312864-22330179 17.32 chr22 22321521 135175..135190 16 22 99 99 18 8 5.97 86.24 +Sample_NN7140 DUP chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 8 40 40 9 13 2.65 43.53 +Sample_NN7140 DUP chr22:25041713-25045989 4.28 chr22 25043851 135494..135498 5 14 39 39 9 10 3.47 173.11 +Sample_NN7391 DUP chr1:12907236-12954995 47.76 chr1 12931115 1610..1621 12 14 99 99 6 6 2.95 66.52 +Sample_NN7391 DEL chr1:16918654-17086181 167.53 chr1 17002417 1956..1982 27 35 99 99 24 8 -3.30 88.07 +Sample_NN7391 DUP chr2:114352640-114356605 3.97 chr2 114354622 19701..19707 7 9 58 58 11 10 3.14 93.91 +Sample_NN7391 DUP chr3:49724582-49725101 0.52 chr3 49724841 27609..27611 3 32 43 43 3 36 4.81 258.00 +Sample_NN7391 DUP chr3:195390495-195475935 85.44 chr3 195433215 32789..32802 14 31 99 99 15 12 3.02 76.01 +Sample_NN7391 DUP chr5:68840731-70388897 1548.17 chr5 69614814 38763..38769 7 52 99 99 17 50 5.93 61.85 +Sample_NN7391 DUP chr5:177466388-177474656 8.27 chr5 177470522 42444..42447 4 94 99 99 33 38 7.23 117.05 +Sample_NN7391 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 51 99 99 18 17 5.77 123.31 +Sample_NN7391 DUP chr6:36100398-36104727 4.33 chr6 36102562 44091..44096 6 5 78 78 5 21 3.64 113.89 +Sample_NN7391 DUP chr8:7154584-7220490 65.91 chr8 7187537 55172..55178 7 17 55 55 18 21 3.09 55.48 +Sample_NN7391 DEL chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 18 31 31 21 18 -2.81 46.39 +Sample_NN7391 DUP chr9:137710502-137710899 0.40 chr9 137710700 64595..64597 3 21 55 55 7 14 5.16 135.52 +Sample_NN7391 DUP chr11:60970984-61017486 46.50 chr11 60994235 74466..74471 6 29 58 58 15 27 3.44 78.10 +Sample_NN7391 DEL chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 18 97 99 12 15 -4.40 50.90 +Sample_NN7391 DEL chr15:21134198-21134625 0.43 chr15 21134411 94353..94354 2 52 79 79 7 52 -7.58 4.28 +Sample_NN7391 DUP chr15:22145375-22145802 0.43 chr15 22145588 94358..94359 2 41 49 49 18 39 6.50 93.00 +Sample_NN7391 DEL chr15:78206559-78213784 7.23 chr15 78210171 98002..98013 12 4 71 99 21 15 -4.10 90.28 +Sample_NN7391 DUP chr15:83013569-83015609 2.04 chr15 83014589 98300..98301 2 60 60 60 3 31 6.83 53.96 +Sample_NN7391 DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 26 99 99 24 96 -6.01 8.60 +Sample_NN7391 DUP chr16:28616918-28621357 4.44 chr16 28619137 102277..102282 6 15 99 99 26 15 4.92 95.90 +Sample_NN7391 DUP chr16:32162610-32163874 1.26 chr16 32163242 103095..103096 2 3 35 35 3 9 5.79 96.06 +Sample_NN7391 DUP chr16:67691142-67691587 0.45 chr16 67691364 104460..104462 3 22 32 32 3 30 4.51 128.78 +Sample_NN7391 DUP chr16:69984810-69997887 13.08 chr16 69991348 104856..104860 5 25 76 76 14 3 3.99 78.43 +Sample_NN7391 DUP chr16:70161163-70208305 47.14 chr16 70184734 104881..104896 16 14 99 99 10 36 4.07 59.54 +Sample_NN7391 DUP chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 56 99 99 31 25 4.65 93.77 +Sample_NN7391 DUP chr17:14095306-14140150 44.84 chr17 14117728 108884..108888 5 22 85 86 14 22 4.15 112.94 +Sample_NN7391 DUP chr17:39240459-39395255 154.80 chr17 39317857 111315..111329 15 10 81 81 8 6 2.44 130.74 +Sample_NN7391 DEL chr19:39225453-39229288 3.84 chr19 39227370 124394..124402 9 61 99 99 12 5 -5.31 31.52 +Sample_NN7391 DUP chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 18 99 99 14 6 4.79 55.47 +Sample_NN7391 DEL chr19:55249974-55361964 111.99 chr19 55305969 128018..128034 17 18 99 99 14 15 -2.64 15.32 +Sample_NN7391 DUP chr21:45999564-46020655 21.09 chr21 46010109 134155..134157 3 10 79 79 10 10 5.82 303.09 +Sample_NN7391 DUP chr21:47706267-47924402 218.14 chr21 47815334 134413..134467 55 4 99 99 4 10 3.51 58.32 +Sample_NN7391 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 43 17 10.00 125.09 +Sample_NN7391 DUP chr22:20383731-20461786 78.06 chr22 20422758 134919..134926 8 5 99 99 26 5 5.40 49.98 +Sample_NN7391 DUP chr22:22980494-22989760 9.27 chr22 22985127 135216..135222 7 17 99 99 8 18 4.43 119.79 +Sample_NN7391 DEL chr22:24342269-24394849 52.58 chr22 24368559 135354..135362 9 3 99 99 3 14 -4.92 1.21 +Sample_NN7391 DUP chr22:25041713-25045035 3.32 chr22 25043374 135494..135496 3 37 39 39 17 6 4.73 191.99 +Sample_NN7391 DEL chrX:49178516-49355920 177.41 chrX 49267218 139561..139563 3 51 56 56 16 30 -5.33 7.18 +Sample_NN7392 DEL chr1:1634915-1677431 42.52 chr1 1656173 370..382 13 2 99 99 8 2 -2.80 12.73 +Sample_NN7392 DUP chr1:12908238-12943231 34.99 chr1 12925734 1611..1619 9 4 52 52 4 5 2.73 52.50 +Sample_NN7392 DUP chr1:17084437-17275421 190.99 chr1 17179929 1979..2005 27 3 99 99 3 13 5.06 92.58 +Sample_NN7392 DEL chr1:22328149-22334008 5.86 chr1 22331078 2731..2736 6 11 78 78 21 9 -3.65 22.09 +Sample_NN7392 DEL chr2:114346127-114356605 10.48 chr2 114351366 19700..19707 8 12 99 99 29 11 -3.49 32.55 +Sample_NN7392 DUP chr3:195392937-195475935 83.00 chr3 195434436 32791..32802 12 23 98 99 9 7 4.80 67.37 +Sample_NN7392 DEL chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 58 99 99 4 13 -5.56 42.25 +Sample_NN7392 DUP chr8:11979496-12044342 64.85 chr8 12011919 55311..55317 7 12 99 99 22 11 5.03 63.76 +Sample_NN7392 DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 48 99 99 14 19 -5.22 24.74 +Sample_NN7392 DUP chr12:8376045-8391345 15.30 chr12 8383695 80972..80977 6 5 82 82 5 11 3.70 66.28 +Sample_NN7392 DUP chr13:24465429-24471125 5.70 chr13 24468277 88167..88171 5 3 48 48 3 14 3.47 46.80 +Sample_NN7392 DUP chr15:20776102-20776700 0.60 chr15 20776401 94349..94350 2 3 33 33 3 33 5.80 38.09 +Sample_NN7392 DUP chr15:21932514-22414393 481.88 chr15 22173453 94355..94366 12 6 99 99 7 21 3.62 56.05 +Sample_NN7392 DEL chr15:78207982-78211657 3.68 chr15 78209819 98004..98009 6 10 77 77 13 7 -3.64 75.72 +Sample_NN7392 DUP chr15:102513423-102516807 3.38 chr15 102515115 99267..99269 3 99 99 99 5 91 10.00 121.66 +Sample_NN7392 DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 9 98 99 4 21 -3.24 22.35 +Sample_NN7392 DUP chr17:18392255-18430160 37.91 chr17 18411207 109358..109365 8 11 34 34 13 12 2.68 46.05 +Sample_NN7392 DEL chr17:20404829-20406547 1.72 chr17 20405688 109572..109576 5 18 70 70 18 21 -3.97 25.70 +Sample_NN7392 DEL chr19:55249974-55267601 17.63 chr19 55258787 128018..128022 5 7 59 59 7 5 -3.72 9.91 +Sample_NN7392 DUP chr22:16256332-16279301 22.97 chr22 16267816 134510..134512 3 36 43 43 36 16 4.74 59.54 +Sample_NN7392 DUP chr22:20383731-20461786 78.06 chr22 20422758 134919..134926 8 5 99 99 12 5 7.04 52.97 +Sample_NN7392 DEL chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 10 99 99 7 10 -4.68 0.23 +Sample_NN7681 DUP chr1:16918654-17046652 128.00 chr1 16982653 1956..1977 22 1 77 99 1 10 2.38 83.74 +Sample_NN7681 DUP chr1:17248445-17275019 26.57 chr1 17261732 1987..2004 18 8 85 99 0 19 2.83 81.58 +Sample_NN7681 DEL chr1:22328149-22336350 8.20 chr1 22332249 2731..2737 7 7 99 99 23 7 -4.55 17.22 +Sample_NN7681 DUP chr2:130877568-130897669 20.10 chr2 130887618 20148..20151 4 25 35 35 24 6 3.90 82.47 +Sample_NN7681 DUP chr3:48613955-48614460 0.51 chr3 48614207 27176..27179 4 18 62 62 11 17 4.41 100.18 +Sample_NN7681 DUP chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 54 78 78 5 7 7.79 112.44 +Sample_NN7681 DUP chr6:304628-351353 46.73 chr6 327990 42799..42805 7 7 83 83 23 7 3.39 59.05 +Sample_NN7681 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 27 62 62 30 23 3.83 88.11 +Sample_NN7681 DUP chr7:76142401-76179178 36.78 chr7 76160789 51082..51085 4 19 71 71 11 15 4.51 59.22 +Sample_NN7681 DUP chr8:145112111-145113982 1.87 chr8 145113046 59042..59049 8 23 60 60 27 17 2.97 63.83 +Sample_NN7681 DUP chr8:145541577-145542583 1.01 chr8 145542080 59145..59150 6 21 47 47 14 12 3.27 99.75 +Sample_NN7681 DEL chr9:117072829-117087432 14.60 chr9 117080130 62578..62583 6 7 99 99 7 11 -4.06 25.70 +Sample_NN7681 DEL chr10:124339094-124353114 14.02 chr10 124346104 70418..70426 9 8 99 99 5 10 -4.60 25.74 +Sample_NN7681 DUP chr11:64564454-64567688 3.23 chr11 64566071 75392..75400 9 6 87 87 32 6 3.04 88.59 +Sample_NN7681 DEL chr12:147946-149412 1.47 chr12 148679 79931..79932 2 20 43 43 20 21 -6.33 24.52 +Sample_NN7681 DUP chr15:75580599-75581824 1.23 chr15 75581211 97824..97825 2 19 42 42 4 8 6.37 71.09 +Sample_NN7681 DUP chr16:109247-111694 2.45 chr16 110470 99280..99287 8 38 59 59 8 3 2.93 76.97 +Sample_NN7681 DEL chr16:14988855-15123913 135.06 chr16 15056384 101197..101213 17 7 99 99 5 27 -4.32 22.53 +Sample_NN7681 DUP chr16:69984810-69996970 12.16 chr16 69990890 104856..104859 4 38 41 41 21 17 4.03 60.98 +Sample_NN7681 DEL chr16:74442531-74447574 5.04 chr16 74445052 105291..105297 7 27 98 99 5 14 -3.83 55.93 +Sample_NN7681 DEL chr19:43708038-43763287 55.25 chr19 43735662 125407..125410 4 58 99 99 22 17 -5.62 0.06 +Sample_NN7681 DUP chr19:55249974-55267601 17.63 chr19 55258787 128018..128022 5 7 33 33 10 5 3.32 42.84 +Sample_NN7681 DEL chr19:55315346-55361964 46.62 chr19 55338655 128025..128034 10 6 80 80 6 20 -2.83 8.91 +Sample_NN7681 DUP chr21:45959068-46032871 73.80 chr21 45995969 134150..134159 10 20 40 40 19 4 2.53 170.93 +Sample_NN7681 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 10 38 38 10 29 -4.59 38.39 +Sample_NN7681 DEL chr22:20383731-20393604 9.87 chr22 20388667 134919..134923 5 15 96 97 9 4 -4.34 6.57 +Sample_NN7681 DUP chr22:24347142-24384284 37.14 chr22 24365713 135355..135361 7 8 99 99 7 16 3.99 41.53 +Sample_NN7681 DUP chr22:50960170-50960998 0.83 chr22 50960584 138221..138225 5 37 65 65 9 8 3.87 114.49 +Sample_NN7681 DUP chrX:103267742-103294971 27.23 chrX 103281356 140820..140821 2 28 38 38 26 20 6.20 60.99 +Sample_NN7682 DUP chr1:16975251-17090975 115.72 chr1 17033113 1967..1986 20 25 99 99 4 15 3.50 110.55 +Sample_NN7682 DUP chr2:114341230-114358421 17.19 chr2 114349825 19699..19708 10 8 95 96 44 7 2.93 92.33 +Sample_NN7682 DUP chr2:130807389-130897669 90.28 chr2 130852529 20145..20151 7 50 99 99 22 8 4.13 97.36 +Sample_NN7682 DEL chr2:240981231-240985489 4.26 chr2 240983360 24411..24412 2 22 35 35 35 9 -5.99 111.30 +Sample_NN7682 DUP chr3:48607313-48609854 2.54 chr3 48608583 27146..27156 11 5 99 99 4 11 2.96 131.20 +Sample_NN7682 DUP chr3:48616802-48617777 0.98 chr3 48617289 27184..27189 6 10 32 32 31 10 3.08 136.55 +Sample_NN7682 DUP chr3:48619139-48620086 0.95 chr3 48619612 27196..27200 5 9 50 50 30 6 3.65 156.77 +Sample_NN7682 DUP chr5:68856051-68856073 0.02 chr5 68856062 38765..38765 1 30 30 30 7 11 10.00 112.09 +Sample_NN7682 DEL chr5:140552243-140560019 7.78 chr5 140556131 40600..40601 2 28 31 31 26 30 -6.08 75.57 +Sample_NN7682 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 56 99 99 22 22 5.57 131.99 +Sample_NN7682 DEL chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 34 99 99 39 0 -6.24 21.34 +Sample_NN7682 DUP chr8:12039614-12250923 211.31 chr8 12145268 55315..55320 6 10 75 99 0 32 5.43 98.31 +Sample_NN7682 DEL chr10:124344787-124353114 8.33 chr10 124348950 70420..70426 7 23 99 99 18 27 -4.98 33.43 +Sample_NN7682 DUP chr11:60970984-60978907 7.92 chr11 60974945 74466..74468 3 22 63 63 17 18 5.28 66.94 +Sample_NN7682 DUP chr12:6645850-6647536 1.69 chr12 6646693 80521..80526 6 7 44 44 7 23 3.22 79.29 +Sample_NN7682 DUP chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 31 99 99 26 6 6.78 120.50 +Sample_NN7682 DUP chr12:9447028-9456803 9.78 chr12 9451915 81112..81121 10 6 88 88 31 5 2.89 60.32 +Sample_NN7682 DEL chr12:9580229-9600768 20.54 chr12 9590498 81143..81151 9 17 99 99 3 17 -3.13 42.95 +Sample_NN7682 DUP chr12:124114944-124191620 76.68 chr12 124153282 87425..87445 21 16 99 99 9 13 3.00 55.13 +Sample_NN7682 DUP chr14:19558991-20404761 845.77 chr14 19981876 90040..90047 8 12 99 99 27 14 3.91 62.97 +Sample_NN7682 DEL chr15:20743914-21134625 390.71 chr15 20939269 94345..94354 10 19 99 99 91 25 -3.48 18.53 +Sample_NN7682 DEL chr15:22332388-22414393 82.01 chr15 22373390 94360..94366 7 23 99 99 30 23 -4.34 36.15 +Sample_NN7682 DUP chr15:41828699-41871526 42.83 chr15 41850112 95367..95387 21 6 99 99 6 21 2.69 69.48 +Sample_NN7682 DUP chr16:21415918-21475063 59.15 chr16 21445490 101741..101744 4 16 33 33 29 8 3.92 57.72 +Sample_NN7682 DEL chr16:74442531-74452196 9.67 chr16 74447363 105291..105298 8 12 42 42 8 18 -2.75 69.39 +Sample_NN7682 DUP chr17:14095306-14139747 44.44 chr17 14117526 108884..108887 4 16 41 41 15 17 4.05 124.91 +Sample_NN7682 DUP chr17:16733797-16736147 2.35 chr17 16734972 109047..109050 4 25 42 42 27 25 3.91 93.36 +Sample_NN7682 DUP chr19:40389652-40398510 8.86 chr19 40394081 124714..124718 5 6 81 87 6 16 4.20 66.78 +Sample_NN7682 DUP chr19:50463394-50464429 1.04 chr19 50463911 127079..127081 3 6 76 99 5 0 6.84 118.82 +Sample_NN7682 DEL chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 99 99 99 1 17 -10.00 59.03 +Sample_NN7682 DEL chr21:10933852-10944787 10.94 chr21 10939319 132959..132964 6 9 38 38 19 5 -3.12 53.11 +Sample_NN7682 DUP chr22:24347142-24394849 47.71 chr22 24370995 135355..135362 8 5 99 99 4 4 4.95 51.68 +Sample_NN7682 DUP chr22:25041133-25045989 4.86 chr22 25043561 135493..135498 6 20 96 97 18 25 3.90 163.19 +Sample_NN7682 DUP chrX:8095006-8139308 44.30 chrX 8117157 138390..138392 3 6 46 46 6 31 4.80 69.44 +Sample_NN7715 DEL chr1:16383364-16390131 6.77 chr1 16386747 1857..1863 7 15 75 75 39 14 -3.27 39.08 +Sample_NN7715 DEL chr1:16914220-16955145 40.93 chr1 16934682 1953..1965 13 5 99 99 5 27 -2.80 106.18 +Sample_NN7715 DUP chr1:17086647-17090975 4.33 chr1 17088811 1984..1986 3 27 91 91 6 23 5.89 168.96 +Sample_NN7715 DEL chr1:40229361-40230489 1.13 chr1 40229925 4706..4708 3 24 41 41 23 9 -4.78 29.46 +Sample_NN7715 DUP chr2:97749324-97849391 100.07 chr2 97799357 18961..18980 20 17 99 99 28 7 2.94 63.65 +Sample_NN7715 DEL chr3:195390957-195456610 65.65 chr3 195423783 32790..32800 11 7 98 99 3 13 -3.04 48.21 +Sample_NN7715 DEL chr3:195701268-195711608 10.34 chr3 195706438 32844..32850 7 36 84 84 3 6 -3.40 51.34 +Sample_NN7715 DEL chr6:304628-351353 46.73 chr6 327990 42799..42805 7 12 99 99 5 12 -5.06 36.17 +Sample_NN7715 DUP chr7:102191679-102257205 65.53 chr7 102224442 52453..52456 4 10 40 40 6 24 3.91 47.73 +Sample_NN7715 DEL chr7:142478757-142482397 3.64 chr7 142480577 54061..54064 4 57 99 99 5 25 -8.40 7.58 +Sample_NN7715 DUP chr7:143883677-144069850 186.17 chr7 143976763 54230..54235 6 15 54 54 16 15 3.50 56.41 +Sample_NN7715 DUP chr8:7718168-8094797 376.63 chr8 7906482 55183..55191 9 25 53 53 25 4 2.93 93.31 +Sample_NN7715 DEL chr8:12245467-12286407 40.94 chr8 12265937 55318..55321 4 30 98 99 7 21 -5.20 24.67 +Sample_NN7715 DEL chr9:117085943-117087432 1.49 chr9 117086687 62580..62583 4 24 46 46 6 9 -4.08 47.00 +Sample_NN7715 DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 90 99 99 32 20 8.62 163.88 +Sample_NN7715 DEL chr11:60906209-61018913 112.70 chr11 60962561 74465..74472 8 3 99 99 11 4 -3.51 42.41 +Sample_NN7715 DUP chr12:31244653-31249679 5.03 chr12 31247166 81835..81841 7 7 57 57 4 6 3.11 96.53 +Sample_NN7715 DEL chr13:24465429-24468340 2.91 chr13 24466884 88167..88170 4 59 99 99 23 20 -5.21 23.11 +Sample_NN7715 DUP chr15:20771427-20776177 4.75 chr15 20773802 94346..94349 4 25 31 31 25 10 3.82 53.87 +Sample_NN7715 DEL chr15:102462345-102516807 54.46 chr15 102489576 99266..99269 4 18 99 99 15 66 -5.27 19.03 +Sample_NN7715 DEL chr16:28606871-28607255 0.39 chr16 28607063 102274..102275 2 17 40 40 9 21 -6.41 65.87 +Sample_NN7715 DUP chr16:55844839-55860207 15.37 chr16 55852523 103456..103463 8 12 83 83 4 5 3.16 62.26 +Sample_NN7715 DEL chr16:70162687-70195184 32.50 chr16 70178935 104882..104895 14 26 99 99 12 37 -3.33 36.32 +Sample_NN7715 DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 12 99 99 4 22 -4.39 60.36 +Sample_NN7715 DEL chr17:14139175-14139747 0.57 chr17 14139461 108886..108887 2 59 59 59 17 4 -7.08 63.56 +Sample_NN7715 DUP chr17:16701556-16736147 34.59 chr17 16718851 109044..109050 7 4 98 99 4 25 5.23 91.28 +Sample_NN7715 DEL chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 9 53 53 13 9 -2.51 40.61 +Sample_NN7715 DEL chr17:20355108-20363756 8.65 chr17 20359432 109567..109571 5 4 46 46 8 4 -3.49 12.08 +Sample_NN7715 DUP chr17:39535208-39538636 3.43 chr17 39536922 111348..111353 6 25 99 99 3 24 5.19 86.57 +Sample_NN7715 DUP chr19:7051052-7056914 5.86 chr19 7053983 119917..119918 2 31 31 31 17 30 6.00 71.31 +Sample_NN7715 DUP chr19:40391998-40398510 6.51 chr19 40395254 124715..124718 4 55 99 99 6 10 7.21 88.62 +Sample_NN7715 DEL chr19:52133552-52149893 16.34 chr19 52141722 127512..127516 5 33 99 99 33 9 -5.43 1.56 +Sample_NN7715 DUP chr19:54802483-54803978 1.50 chr19 54803230 127897..127900 4 53 99 99 8 23 5.60 90.64 +Sample_NN7715 DUP chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 13 69 69 60 13 5.39 112.23 +Sample_NN7715 DEL chr22:20383731-20398336 14.61 chr22 20391033 134919..134925 7 26 70 70 25 12 -3.23 17.43 +Sample_NN7716 DUP chr1:16348486-16360544 12.06 chr1 16354515 1819..1837 19 18 99 99 10 18 4.96 80.69 +Sample_NN7716 DUP chr1:16918342-16972173 53.83 chr1 16945257 1955..1966 12 36 99 99 14 18 4.06 159.22 +Sample_NN7716 DEL chr1:17085298-17090975 5.68 chr1 17088136 1980..1986 7 35 99 99 29 30 -4.48 97.15 +Sample_NN7716 DUP chr1:161483685-161578341 94.66 chr1 161531013 11046..11056 11 2 99 99 5 3 3.16 70.34 +Sample_NN7716 DUP chr2:233272555-233273548 0.99 chr2 233273051 23911..23913 3 34 42 42 4 11 4.81 104.70 +Sample_NN7716 DEL chr3:195390495-195479317 88.82 chr3 195434906 32789..32805 17 2 98 99 9 2 -4.15 39.83 +Sample_NN7716 DEL chr3:195701268-195711608 10.34 chr3 195706438 32844..32850 7 4 31 31 4 23 -2.83 54.06 +Sample_NN7716 DUP chr6:35754775-35765102 10.33 chr6 35759938 44052..44056 5 30 84 84 26 19 4.17 127.57 +Sample_NN7716 DEL chr8:7153153-7308721 155.57 chr8 7230937 55171..55181 11 13 99 99 12 10 -3.46 21.10 +Sample_NN7716 DUP chr8:11979496-12008698 29.20 chr8 11994097 55311..55314 4 26 99 99 12 4 5.52 85.01 +Sample_NN7716 DEL chr8:12245467-12287960 42.49 chr8 12266713 55318..55322 5 10 99 99 6 3 -4.50 38.95 +Sample_NN7716 DUP chr10:27225666-27230930 5.26 chr10 27228298 66314..66315 2 58 82 82 17 29 7.78 168.69 +Sample_NN7716 DEL chr12:8376045-8385203 9.16 chr12 8380624 80972..80976 5 5 39 39 5 37 -3.45 66.09 +Sample_NN7716 DEL chr12:9436253-9456803 20.55 chr12 9446528 81110..81121 12 5 99 99 25 5 -2.81 27.61 +Sample_NN7716 DUP chr15:21134526-21134625 0.10 chr15 21134575 94354..94354 1 32 32 32 7 7 9.97 110.00 +Sample_NN7716 DEL chr15:23299681-23300167 0.49 chr15 23299924 94425..94426 2 58 59 59 3 6 -6.92 120.21 +Sample_NN7716 DEL chr15:43888606-43941039 52.43 chr15 43914822 95831..95857 27 5 99 99 27 5 -2.81 18.91 +Sample_NN7716 DUP chr15:75557463-75557765 0.30 chr15 75557614 97820..97821 2 33 36 36 25 7 6.19 72.77 +Sample_NN7716 DUP chr15:78206559-78208271 1.71 chr15 78207415 98002..98005 4 12 78 78 14 12 4.72 181.29 +Sample_NN7716 DUP chr16:1290678-1291700 1.02 chr16 1291189 99714..99716 3 32 33 33 1 32 4.71 132.97 +Sample_NN7716 DEL chr16:70162687-70195184 32.50 chr16 70178935 104882..104895 14 10 31 31 15 9 -2.20 36.77 +Sample_NN7716 DEL chr16:70714697-70714928 0.23 chr16 70714812 105025..105026 2 98 99 99 32 24 -9.90 45.77 +Sample_NN7716 DEL chr16:74394531-74452196 57.67 chr16 74423363 105289..105298 10 8 99 99 3 17 -4.38 53.92 +Sample_NN7716 DUP chr16:75562430-75576581 14.15 chr16 75569505 105406..105411 6 25 42 42 22 23 3.21 67.89 +Sample_NN7716 DEL chr17:14095306-14140150 44.84 chr17 14117728 108884..108888 5 14 37 37 27 14 -3.41 76.93 +Sample_NN7716 DEL chr17:16691249-16736147 44.90 chr17 16713698 109040..109050 11 33 98 99 10 35 -4.32 33.03 +Sample_NN7716 DUP chr17:18380099-18430160 50.06 chr17 18405129 109355..109365 11 5 60 60 14 4 2.55 71.73 +Sample_NN7716 DUP chr17:48270001-48271987 1.99 chr17 48270994 112943..112949 7 17 34 34 18 22 2.89 134.17 +Sample_NN7716 DEL chr17:61950539-61951089 0.55 chr17 61950814 113912..113913 2 57 58 58 20 13 -7.04 67.18 +Sample_NN7716 DUP chr19:50473069-50473627 0.56 chr19 50473348 127082..127083 2 75 87 87 37 26 8.17 174.41 +Sample_NN7716 DUP chr19:54724025-54746724 22.70 chr19 54735374 127861..127869 9 86 99 99 24 17 7.89 92.88 +Sample_NN7716 DEL chr19:54801927-54803978 2.05 chr19 54802952 127896..127900 5 90 99 99 26 17 -9.58 0.40 +Sample_NN7716 DEL chr22:16256332-16279301 22.97 chr22 16267816 134510..134512 3 27 72 72 52 7 -5.45 33.76 +Sample_NN7716 DEL chr22:18766903-18778742 11.84 chr22 18772822 134658..134660 3 99 99 99 35 25 -8.22 30.04 +Sample_NN7716 DUP chrX:52661841-52683950 22.11 chrX 52672895 139641..139647 7 21 99 99 21 29 3.83 66.27 +Sample_NN7716 DUP chrX:103217200-103294971 77.77 chrX 103256085 140819..140821 3 26 73 73 25 38 5.62 102.89 diff --git a/intro-unix-command-line/XHMM_results.tar.bz2 b/intro-unix-command-line/XHMM_results.tar.bz2 new file mode 100644 index 0000000..28e8f4d Binary files /dev/null and b/intro-unix-command-line/XHMM_results.tar.bz2 differ diff --git a/intro-unix-command-line/data.tar.gz b/intro-unix-command-line/data.tar.gz new file mode 100644 index 0000000..33e05c1 Binary files /dev/null and b/intro-unix-command-line/data.tar.gz differ