updated instructions and example data

intro-pathway-analysis-visualization/ExampleData/lung.expr.up.txt

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+YBX2
+DLX6
+CELSR3
+PAX7
+SYT7
+ANLN
+GABRA3
+ABCC2
+DEPDC1
+INSRR
+ARNTL2
+HMGB3
+DEPDC1B
+ZIC2
+MAGEC2
+POLQ
+STYK1
+COL11A1
+SPAG4
+MCM10
+ASPM
+TRIP13
+HMMR
+PPP2R2C
+KCNQ2
+SPAG5
+UBE2T
+FAP
+RBFOX1
+PTPRH
+NDC80
+NKAIN1
+IGSF9
+RAD54L
+TMPRSS11E
+PTHLH
+DNMT3B
+TPX2
+FER1L4
+BIRC5
+KIF4A
+DLL3
+ORC6
+RGS17
+CDC6
+MMP11
+COCH
+POLE2
+GINS1
+MYBL2
+PABPC1L
+SALL4
+EEF1A2
+FERMT1
+FAM83D
+SRPX2
+CENPI
+RHBDL1
+SALL1
+OIP5
+FSD1
+MAST1
+STX1A
+EZH2
+LHX2
+CA9
+EBF3
+DNAJC12
+NEIL3
+NCAPG
+KIAA1549L
+FOXM1
+PRR4
+CDCA3
+TTK
+POLR3G
+ECT2
+CENPA
+FHL2
+ABCB6
+RALGPS2
+AGMAT
+SLC2A1
+CDC20
+NEK2
+CENPF
+KIF14
+ATP10B
+ONECUT2
+HELLS
+TMEM156
+PAEP
+TWIST1
+CENPK
+STIL
+HJURP
+COL10A1
+WFDC3
+OR2B6
+C1orf61
+DLGAP5
+SYNGR3
+VIL1
+GNGT1
+PPAT
+ADM2
+BAIAP2L2
+VGF
+E2F8
+EGLN3
+SGO1
+FAM155B
+GINS2
+BARX1
+CA6
+TOP2A
+RHBG
+FCRL2
+C1QTNF6
+CCNB1
+CDCA8
+TCN1
+ACRV1
+GOLM1
+PSAT1
+TROAP
+B4GALNT1
+IGF2BP3
+BRIP1
+ARHGEF39
+TFAP2A
+SLCO5A1
+SULF1
+KIF23
+KNL1
+ITPKA
+BCL2L10
+CGREF1
+KIF11
+CEP55
+GPR87
+ADAMTS14
+DNA2
+CILP
+CENPE
+GCNT3
+PIF1
+FANCI
+PMAIP1
+PLPP2
+SLC2A5
+PLK4
+KIF2C
+NUF2
+FCRL5
+CRABP2
+KCNH1
+HHIPL2
+CDCA7
+DLX1
+CCDC150
+ABCA12
+TRPM8
+OCIAD2
+CCNA2
+LGSN
+ZC3HAV1L
+FAM83A
+CDKN2A
+MKI67
+ADAM12
+CHEK1
+HMGA2
+SLC7A11
+CENPU
+PDK1
+SPOCK1
+CABYR
+EME1
+EPHB1
+MAGEC1
+SLC24A2
+CXCL13
+GLYATL2
+FBXO32
+BUB1B
+TMEM171
+CCNB2
+DPYSL5
+XDH
+HIST1H2BD
+CDC25C
+HIST1H4H
+CILP2
+TFF1
+RECQL4
+SPC24
+TEDC2
+AK4
+AKR7A3
+KIF26B
+LINC01116
+TRIM46
+TSACC
+CRYBA2
+AIM2
+KIF15
+MAD2L1
+IL31RA
+STEAP1
+SP8
+CTHRC1
+MELK
+TSHR
+PGM2L1
+SLC16A9
+GJB2
+SKA3
+E2F7
+GLB1L3
+GPT2
+PPP1R14D
+NETO1
+HTR3A
+PLK1
+GREM1
+TTYH1
+KLK6
+RAB26
+PBK
+COL3A1
+GDNF
+SOX14
+RAB3B
+COL22A1
+CKAP2L
+BUB1
+ONECUT1
+CDK1
+CST1
+HOXB9
+HS6ST2
+P2RY6
+RRM2
+FRMD5
+C5orf34
+FUT9
+MYEOV
+SYT12
+C11orf86
+MUC13
+SPTBN2
+NWD2
+EXO1
+ANKRD36C
+IL20RB
+LEP
+UBE2C
+MARCKSL1
+ANKS4B
+RMI2
+ETV4
+FAM172BP
+GPX2
+ATAD5
+FUT2
+CD19
+DNAJC22
+CPNE7
+ANKRD18A
+EMC3-AS1
+NQO1
+B4GALNT4
+GALNT9
+PYCR1
+EPHA10
+IQGAP3
+KNTC1
+POU3F2
+CDCA2
+PARPBP
+PRAME
+DNAH14
+KIF18B
+SAPCD2
+THBS2
+HPDL
+ERCC6L
+TNFRSF18
+TMPRSS11A
+BAGE2
+HIST1H1C
+ENTPD8
+ATP2A1
+XRCC2
+HIST1H2AI
+S100A2
+HIST1H2AG
+HIST1H2AD
+SCN8A
+HIST1H4C
+DMBX1
+PRB3
+AKR1B10
+EPS8L3
+ARHGAP11A
+SNORA73B
+SNORA23
+ZYG11A
+LINC01270
+IGFL2
+FAM83A-AS1
+LGR4
+AKR7L
+IGHG4
+IGHG1
+PPP1R14BP2
+GPC2
+LINC02418
+VAC14-AS1
+UBE2QL1
+TNFRSF25
+LINC01983
+HAGLROS
+PSMD10P2
+AKR1B15
+LINC02474
+NKX1-2
+ANKRD36BP2
+FEZF1-AS1
+FOXD3-AS1
+DLX6-AS1
+LINC00665
+LINC01271
+LINC02535
+DSCAM-AS1
+RPSAP52
+CCDC169
+MNX1-AS1
+RPL18P13
+LINC00461
+LINC02014
+LUCAT1
+LINC02362
+LINC01234
+LINC00942
+PVT1
+SCARNA13
+BBOX1-AS1
+MEX3A
+LINC00346
+SALL3
+TUBB3
+LINC02544
+VPS9D1-AS1
+LINC01977
+RUNDC3A-AS1
+AFAP1-AS1
+LHX1
+UHRF1
+HIST1H2BF
+NEFL
+RDM1
+HIST1H2AM
+LINC01395
+HELLPAR
+SNHG4