diff --git a/docs/Working_on_Wynton_Part_1.html b/docs/Working_on_Wynton_Part_1.html
index 98066a3..13f2af2 100644
--- a/docs/Working_on_Wynton_Part_1.html
+++ b/docs/Working_on_Wynton_Part_1.html
@@ -585,10 +585,16 @@ document.addEventListener('DOMContentLoaded', function(e) {
 </section>
 <section id="introductions" class="slide level2">
 <h2>Introductions</h2>
-<p><strong>Natalie Elphick</strong><br />
-Bioinformatician I</p>
-<p><strong>Alex Pico (TA)</strong><br />
-Bioinformatics Core Director</p>
+<p>Instructor:</p>
+<p>      <strong>Natalie Elphick</strong><br />
+      <em>Bioinformatician I</em></p>
+<p>TAs:</p>
+<p>      <strong>Alex Pico</strong><br />
+      <em>Bioinformatics Core Director</em><br />
+      <strong>Ayushi Agrawal</strong><br />
+      <em>Bioinformatician III</em><br />
+      <strong>Min-Gyoung Shin</strong><br />
+      <em>Bioinformatician III</em></p>
 </section>
 <section id="target-audience" class="slide level2">
 <h2>Target Audience</h2>
@@ -634,7 +640,7 @@ specifications</a>)<br />
 <li>Funded and administered cooperatively by UCSF campus IT and key
 research groups</li>
 </ul>
-<p><a href="https://wynton.ucsf.edu">https://wynton.ucsf.edu</a></p>
+<p><a href="https://wynton.ucsf.edu" class="uri">https://wynton.ucsf.edu</a></p>
 </section></section>
 <section>
 <section id="node-types-and-logging-in" class="title-slide slide level1">
@@ -781,8 +787,8 @@ requests</li>
 <li>Certain input/output patterns can be problematic</li>
 </ul>
 </section>
-<section id="beegfs---io-patterns" class="slide level2 small-bullets">
-<h2 class="small-bullets">BeeGFS - I/O patterns</h2>
+<section id="beegfs---io-patterns" class="slide level2">
+<h2>BeeGFS - I/O patterns</h2>
 <ul>
 <li>Anything that requires lots of metadata operations can feel slow
 <ul>
@@ -791,21 +797,18 @@ and directory searches (<strong>conda</strong>)</li>
 </ul></li>
 <li>Keep the number of reads and writes to a single directory to a
 reasonable number</li>
-<li>If using conda, putting the conda application inside a Apptainer
-(formerly singularity) container will result in better performance</li>
 </ul>
 </section>
-<section id="beegfs---tips" class="slide level2">
-<h2>BeeGFS - Tips</h2>
+<section id="beegfs---takehome-message" class="slide level2 small-bullets">
+<h2 class="small-bullets">BeeGFS - Takehome Message</h2>
 <ul>
 <li>Prefer fewer, large files over many small ones</li>
-<li>Distribute reading and writing over several directories
-<ul>
-<li>Including compute job output and error files</li>
-</ul></li>
-<li>Use local scratch (/scratch) when possible</li>
+<li>Distribute reading and writing over several directories</li>
+<li>Use local scratch (<strong>/scratch</strong>) when possible</li>
 <li>Don’t include anything in <strong>/wynton</strong> in your default
 LD_LIBRARY_PATH</li>
+<li>If using conda, putting the conda application inside a Apptainer
+(formerly singularity) container will result in better performance</li>
 </ul>
 </section>
 <section id="storage-1" class="slide level2 small-bullets">
@@ -872,18 +875,22 @@ contacting Gladstone IT<br />
 knowledge base page</a></li>
 </ul>
 </section>
-<section id="storage-advice" class="slide level2">
-<h2>Storage Advice</h2>
+<section id="storage-advice" class="slide level2 small-bullets">
+<h2 class="small-bullets">Storage Advice</h2>
 <ul>
 <li>Always back up anything you store under
 <strong>/wynton</strong></li>
-<li>Back up your data on <strong>/gladstone</strong> if you have access
-to it
+<li>If you have access to it keep all of your data on
+<strong>/gladstone</strong>
 <ul>
-<li>A large number of jobs reading and writing to these directories will
+<li>A large number of jobs reading and writing to these directories may
 be slower since it is NFS mounted not BeeGFS</li>
 </ul></li>
-<li>Use the scratch directories to store temporary files</li>
+<li>Use the scratch directories to store temporary files
+<ul>
+<li>e.g. A large amount of .fastq that you do not need after the
+alignment step</li>
+</ul></li>
 </ul>
 </section></section>
 <section>
@@ -906,6 +913,13 @@ be slower since it is NFS mounted not BeeGFS</li>
 </ul>
 <pre><code>{local}$ scp alice@dt1.wynton.ucsf.edu:/path/to/local_file.tsv /destination/path</code></pre>
 </section>
+<section id="hands-on" class="slide level2">
+<h2>Hands-on</h2>
+<ul>
+<li>Use scp to copy this <a href="https://www.dropbox.com/scl/fi/463ymz88q89d2co90kj30/candidatus_carsonella_ruddii_complete_genome.fasta?rlkey=9x64iek2yy149sh2i1r9sse9y&amp;dl=1">file</a>
+into your home directory on Wynton</li>
+</ul>
+</section>
 <section id="gui-sftp-clients" class="slide level2 small-bullets">
 <h2 class="small-bullets">GUI SFTP Clients</h2>
 <ul>
@@ -955,8 +969,7 @@ UCSF Box</a> instructions</li>
 </section>
 <section id="poll-1" class="slide level2">
 <h2>Poll 1</h2>
-<p>Which of these can you <strong>not</strong> log in to from your
-computer?</p>
+<p>Poll 1 - Which of these can you <strong>not</strong> SSH in to?</p>
 <ol type="1">
 <li>Login Nodes</li>
 <li>Development Nodes</li>
@@ -967,7 +980,7 @@ computer?</p>
 <section id="poll-2" class="slide level2">
 <h2>Poll 2</h2>
 <p>The <strong>/wynton</strong> directory is backed up on a nightly
-basis so do not need to back up the data you store here.</p>
+basis, so there is no need to back up anything stored here.</p>
 <ol type="1">
 <li>True</li>
 <li>False</li>
@@ -1136,7 +1149,7 @@ run:</li>
 <ul>
 <li>Please take some time to fill out the workshop survey if you are not
 attending part 2:<br />
-<a href="https://www.surveymonkey.com/r/F75J6VZ">https://www.surveymonkey.com/r/F75J6VZ</a></li>
+<a href="https://www.surveymonkey.com/r/F75J6VZ" class="uri">https://www.surveymonkey.com/r/F75J6VZ</a></li>
 </ul>
 </section>
 <section id="upcoming-data-science-training-program-workshops" class="slide level2">
diff --git a/docs/Working_on_Wynton_Part_2.html b/docs/Working_on_Wynton_Part_2.html
index 1d5b705..1984afa 100644
--- a/docs/Working_on_Wynton_Part_2.html
+++ b/docs/Working_on_Wynton_Part_2.html
@@ -585,10 +585,14 @@ document.addEventListener('DOMContentLoaded', function(e) {
 </section>
 <section id="introductions" class="slide level2">
 <h2>Introductions</h2>
-<p><strong>Natalie Elphick</strong><br />
-Bioinformatician I</p>
-<p><strong>Alex Pico (TA)</strong><br />
-Bioinformatics Core Director</p>
+<p>Instructor:</p>
+<p>      <strong>Natalie Elphick</strong><br />
+      <em>Bioinformatician I</em></p>
+<p>TAs:</p>
+<p>      <strong>Alex Pico</strong><br />
+      <em>Bioinformatics Core Director</em><br />
+      <strong>Michela Traglia</strong><br />
+      <em>Senior Statistician</em></p>
 </section>
 <section id="target-audience" class="slide level2">
 <h2>Target Audience</h2>
@@ -939,8 +943,8 @@ cancelled</li>
 </section>
 <section id="poll-3" class="slide level2">
 <h2>Poll 3</h2>
-<p>Anything that you can run on a compute node can be run on a
-development node.</p>
+<p>Any submitted job to compute nodes can also be run on development
+nodes.</p>
 <ol type="1">
 <li>True</li>
 <li>False</li>
@@ -1155,6 +1159,8 @@ into Wynton</li>
 </section>
 <section id="bioinformatics-questions" class="slide level2">
 <h2>Bioinformatics Questions</h2>
+<p>For any bioinformatics specific questions feel free to reach out to
+the Gladstone Bioinformatics Core.</p>
 <ul>
 <li>Email
 <ul>
@@ -1174,8 +1180,11 @@ into Wynton</li>
 <section id="thank-you" class="slide level2">
 <h2>Thank You!</h2>
 <ul>
-<li>Please take some time to fill out the workshop survey:<br />
-<a href="https://www.surveymonkey.com/r/F75J6VZ">https://www.surveymonkey.com/r/F75J6VZ</a></li>
+<li><p>Please take some time to fill out the workshop survey:<br />
+<a href="https://www.surveymonkey.com/r/F75J6VZ">https://www.surveymonkey.com/r/F75J6VZ</a></p></li>
+<li><p>Want some additional Wynton training?<br />
+Check out the UCSF library <a href="https://calendars.library.ucsf.edu/event/12197724">Introduction to
+Wynton HPC Cluster</a> Workshop</p></li>
 </ul>
 </section>
 <section id="upcoming-data-science-training-program-workshops" class="slide level2">
diff --git a/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd b/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
index f20e2ac..6d84bd2 100644
--- a/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
+++ b/working-on-wynton-hpc/Working_on_Wynton_Part_1.Rmd
@@ -25,50 +25,50 @@ output:
 <center>*Press the ? key for tips on navigating these slides*</center>
 
 ## Introductions
+Instructor:
 
-**Natalie Elphick**    
-Bioinformatician I   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Natalie Elphick**   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatician I*
 
-**Alex Pico (TA)**     
-Bioinformatics Core Director
 
+TAs:
+
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Alex Pico**    
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatics Core Director*   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Ayushi Agrawal**    
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatician III*   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Min-Gyoung Shin**    
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatician III*
 
 ## Target Audience
--   Prior experience with UNIX command-line 
-
 
+-   Prior experience with UNIX command-line
 
 ## Part 1:
 
-1. What is an HPC cluster? 
-2. Node Types and Logging in
-3. Storage
-4. Data Transfer
-5. Installing Software
-6. Containers
-
-
+1.  What is an HPC cluster?
+2.  Node Types and Logging in
+3.  Storage
+4.  Data Transfer
+5.  Installing Software
+6.  Containers
 
 # What is Wynton HPC?
 
 ## High-performance Computing Cluster {.smaller-picture}
 
--   A collection of specialized computers (nodes) connected together on a fast local network   
+-   A collection of specialized computers (nodes) connected together on a fast local network
 
 ![HPC Diagram](slide_materials/HPC_diagram.png)
 
-
-
 ## Wynton {.small-bullets}
 
--   A HPC Linux environment available to all UCSF researchers for free   
+-   A HPC Linux environment available to all UCSF researchers for free\
 -   Uses the Rocky 8 linux OS
--   Includes several hundred compute nodes and a large shared storage system ([Cluster specifications](https://wynton.ucsf.edu/hpc/about/specs.html))    
--   Funded and administered cooperatively by UCSF campus IT and key research groups   
-
-[https://wynton.ucsf.edu](https://wynton.ucsf.edu)
-
+-   Includes several hundred compute nodes and a large shared storage system ([Cluster specifications](https://wynton.ucsf.edu/hpc/about/specs.html))\
+-   Funded and administered cooperatively by UCSF campus IT and key research groups
 
+<https://wynton.ucsf.edu>
 
 # Node Types and Logging in
 
@@ -86,15 +86,14 @@ Bioinformatics Core Director
 -   The primary method to log in is to use an SSH client application
 -   The Wynton HPC is up to date with information on logging in: [Access Cluster](https://wynton.ucsf.edu/hpc/get-started/access-cluster.html)
 
-<u>Names</u>:   
-    
-    
+<u>Names</u>:
+
 log1, log2 and plog (for PHI users)
 
 ## Login {.small-bullets}
 
--   Connect to the UCSF or Gladstone WiFi networks (or the respective VPN) or using [2FA](https://wynton.ucsf.edu/hpc/get-started/duo-signup.html)   
--   **ssh [your-username]@[node].wynton.ucsf.edu**
+-   Connect to the UCSF or Gladstone WiFi networks (or the respective VPN) or using [2FA](https://wynton.ucsf.edu/hpc/get-started/duo-signup.html)\
+-   **ssh [your-username]\@[node].wynton.ucsf.edu**
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "{local}$ ssh alice@log1.wynton.ucsf.edu
@@ -104,20 +103,20 @@ alice@log1.wynton.ucsf.edu's password:
 
 -   There will not be any visual feedback when typing your password
 
-
 ## The Development Nodes {.small-bullets}
 
 -   Has a set of [core software](https://wynton.ucsf.edu/hpc/software/core-software.html) installed
-    - e.g. git, vim, nano, make and python
+    -   e.g. git, vim, nano, make and python
 -   Also has access to [software repositories](https://wynton.ucsf.edu/hpc/software/software-repositories.html) some which are maintained by other users or research groups
-    - e.g. matlab, R and openjdk
+    -   e.g. matlab, R and openjdk
 -   Cannot be logged in to directly, only from a login node
+
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "ssh dev1" 
 ```
 
-<u>Names</u>:   
-    
+<u>Names</u>:
+
 dev[1-3], gpudev1, pdev1 (PHI) and pgpudev1 (PHI)
 
 ## Data Transfer Nodes {.small-bullets}
@@ -127,88 +126,81 @@ dev[1-3], gpudev1, pdev1 (PHI) and pgpudev1 (PHI)
 -   Limited software
 -   Use for transferring files to and from Wynton
 
-<u>Example</u>: 
+<u>Example</u>:
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "{local}$ scp local_file.tsv alice@dt1.wynton.ucsf.edu:~/" 
 ```
 
-<u>Names</u>:   
-    
+<u>Names</u>:
+
 dt1 and dt2
 
-
-
 ## Compute Nodes {.small-bullets}
 
 -   Can **not** be logged in to directly
--   No internet or UCSF network access   
+-   No internet or UCSF network access\
 -   Used to run non-interactive compute job scripts
 -   The software to run the job script is provided using a container
 
-
 ![Compute Jobs](slide_materials/compute_job_workflow.png)
 
-
-
 # Storage
 
-
 ## The File System {.small-bullets}
 
 -   A file system how information is stored and retrieved on a computer
-      -   Consists of files and directories
+    -   Consists of files and directories
 -   A local file system is function of the operating system and only accessible from a single computer
 -   A shared file system is accessible from multiple computers
 
-
-
 ## BeeGFS {.small-bullets}
 
 -   Wynton uses a *parallel* shared file system called BeeGFS
-    - The files are stored as "chunks" spread across many different servers
+    -   The files are stored as "chunks" spread across many different servers
 -   BeeGFS has multiple services that work together to manage the file system
-    - Storage (stores the chunks)
-    - Metadata (tracks the chunks and information about their file)
-    - Management (tracks all of the services)
-    - Client (provides linux access to the file system)
-    
+    -   Storage (stores the chunks)
+    -   Metadata (tracks the chunks and information about their file)
+    -   Management (tracks all of the services)
+    -   Client (provides linux access to the file system)
+
+## BeeGFS - Advantages
 
-## BeeGFS - Advantages 
 -   High throughput
 -   Redundancy can be built in by mirroring services
 -   Adding new storage is fast and does not require downtime
 
-## BeeGFS - Caveats 
+## BeeGFS - Caveats
+
 -   For any client node, performance is limited by the network bandwidth of that node
 -   Network latency becomes extremely important for all metadata requests
 -   Certain input/output patterns can be problematic
 
-## BeeGFS - I/O patterns {.small-bullets}
--   Anything that requires lots of metadata operations can feel slow 
+## BeeGFS - I/O patterns 
+
+-   Anything that requires lots of metadata operations can feel slow
     -   e.g: lots of writes to the same directory and lots of file lookups and directory searches (**conda**)
 -   Keep the number of reads and writes to a single directory to a reasonable number
--   If using conda, putting the conda application inside a Apptainer (formerly singularity) container will result in better performance
 
-## BeeGFS - Tips 
+
+## BeeGFS - Takehome Message {.small-bullets}
 
 -   Prefer fewer, large files over many small ones
 -   Distribute reading and writing over several directories
-    -   Including compute job output and error files
 -   Use local scratch (**/scratch**) when possible
 -   Don't include anything in **/wynton** in your default LD_LIBRARY_PATH
-
+-   If using conda, putting the conda application inside a Apptainer (formerly singularity) container will result in better performance
 
 ## Storage {.small-bullets}
 
 -   **Wynton storage is not backed up**
 -   /wynton/home/**[group_name]**/**[user]**
-    - PHI users : /wynton/protected/home/**[group_name]**/**[user]**
-    - User home directory - limited to 500 GiB
+    -   PHI users : /wynton/protected/home/**[group_name]**/**[user]**
+    -   User home directory - limited to 500 GiB
 -   /wynton/group/**[group_name]**
-    - PHI users : /wynton/protected/group/**[group_name]**
-    - User group directory - disk quota varies by group
-    - Use this directory for any analysis you want to share with your lab
+    -   PHI users : /wynton/protected/group/**[group_name]**
+    -   User group directory - disk quota varies by group
+    -   Use this directory for any analysis you want to share with your lab
 -   [More information on disk quotas](https://wynton.ucsf.edu/hpc/howto/storage-size.html#file-sizes-and-disk-quotas)
 
 To check your group disk quota run:
@@ -217,76 +209,79 @@ To check your group disk quota run:
 echo 'beegfs-ctl --getquota --storagepoolid=12 --gid "$(id --group)"'
 ```
 
-
-
 ## Scratch - Temporary Storage {.small-bullets}
+
 -   Local **/scratch** - 0.1-1.8 TiB/node storage unique to each compute node
     -   Can only be accessed from the specific compute node
-    -   Use this to store intermediate files only needed for a job  
+    -   Use this to store intermediate files only needed for a job\
 -   **/wynton/scratch** and **/wynton/protected/scratch** (for PHI users)
     -   703 TiB storage accessible from everywhere
 -   No quotas
-    
-<br></br>    
-    
+
+<br></br>
+
 **Files not used for 2 weeks are automatically deleted**
 
-
-
 ## Gladstone HIVE
+
 -   Gladstone's HIVE storage server is mounted directly to Wynton under **/gladstone**
     -   Only certain HIVE folders are accessible directly on Wynton
     -   Files under **/gladstone** are backed up
 -   Naming: **/gladstone/[lab]**
-    -   Directories that are shared between multiple labs can be set up by contacting Gladstone IT   
+    -   Directories that are shared between multiple labs can be set up by contacting Gladstone IT\
 -   For more information visit the [IT knowledge base page](https://help.gladstone.org/support/solutions/articles/14000033963)
 
-
-## Storage Advice
+## Storage Advice {.small-bullets}
 
 -   Always back up anything you store under **/wynton**
--   Back up your data on **/gladstone** if you have access to it
-    -   A large number of jobs reading and writing to these directories will be slower since it is NFS mounted not BeeGFS
+-   If you have access to it keep all of your data on **/gladstone** 
+    -   A large number of jobs reading and writing to these directories may be slower since it is NFS mounted not BeeGFS
 -   Use the scratch directories to store temporary files
-
-
+    -   e.g. A large amount of .fastq that you do not need after the alignment step 
 
 # Data Transfer
 
-
-
 ## Secure Copy - scp
 
 -   Local file to Wynton
+
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "{local}$ scp /path/to/local_file.tsv alice@dt1.wynton.ucsf.edu:/destination/path"
 ```
 
 -   Copy a directory to a folder on Wynton
+
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "{local}$ scp -r local_folder/ alice@dt1.wynton.ucsf.edu:/destination/path"
 ```
 
 -   Copy a single file to Wynton from your local machine
+
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo "{local}$ scp alice@dt1.wynton.ucsf.edu:/path/to/local_file.tsv /destination/path"
 ```
 
 
+## Hands-on
+
+-   Use scp to copy this [file](https://www.dropbox.com/scl/fi/463ymz88q89d2co90kj30/candidatus_carsonella_ruddii_complete_genome.fasta?rlkey=9x64iek2yy149sh2i1r9sse9y&dl=1) into your home directory on Wynton
+
+
+
+
+
 ## GUI SFTP Clients {.small-bullets}
 
 -   These let you transfer files to and from Wynton using a GUI
 -   [2 factor authentication](https://wynton.ucsf.edu/hpc/get-started/duo-signup.html) may be required
--   [Cyberduck](https://cyberduck.io/) 
-    -   Navigate to Preferences -> Transfers -> General
+-   [Cyberduck](https://cyberduck.io/)
+    -   Navigate to Preferences -\> Transfers -\> General
     -   change the Transfer Files setting "Use browser connection" instead of "Open Multiple connections"
-
--   [FileZilla](https://filezilla-project.org/) 
+-   [FileZilla](https://filezilla-project.org/)
     -   In the General tab, select ‘SFTP’ as the Protocol instead of ‘FTP’
     -   For Logon Type, select ‘Interactive’ instead of ‘Ask for Password’
     -   Under the Transfer Settings tab, you might need to click the ‘Limit number of simultaneous connections’ and make sure the ‘Maximum number of connections’ is set to 1
 
-
 ## Globus
 
 -   [Globus](https://wynton.ucsf.edu/hpc/transfers/globus.html) is a service for moving, syncing, and sharing large amounts of data
@@ -300,27 +295,21 @@ echo "{local}$ scp alice@dt1.wynton.ucsf.edu:/path/to/local_file.tsv /destinatio
     -   Do this from a data transfer node using screen/tmux
 -   Do not use rclone for transfers to Box, follow the [Wynton to UCSF Box](https://wynton.ucsf.edu/hpc/transfers/ucsf-box.html) instructions
 
+## Poll 1
 
+Poll 1 - Which of these can you **not** SSH in to?
 
-
-## Poll 1 
-
-Which of these can you **not** log in to from your computer?
-
-1.    Login Nodes
-2.    Development Nodes
-3.    Data transfer Nodes
-4.    Compute Nodes
+1.  Login Nodes
+2.  Development Nodes
+3.  Data transfer Nodes
+4.  Compute Nodes
 
 ## Poll 2
 
-The **/wynton** directory is backed up on a nightly basis so do not need to back up the data you store here.
-
-1.    True
-2.    False
-
-
+The **/wynton** directory is backed up on a nightly basis, so there is no need to back up anything stored here.
 
+1.  True
+2.  False
 
 # Installing Software
 
@@ -331,9 +320,9 @@ The **/wynton** directory is backed up on a nightly basis so do not need to back
 -   <u>Always install software in a development node</u>
 -   Download a precompiled binary or [install from source](https://wynton.ucsf.edu/hpc/howto/install-from-source.html)
 
-## Install Samtools from Source  {.small-list}
+## Install Samtools from Source {.small-list}
 
-1.    Download and extract source code
+1.  Download and extract source code
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo '[alice@dev1 ~]$ mkdir -p "/scratch/$USER"
@@ -342,13 +331,14 @@ echo '[alice@dev1 ~]$ mkdir -p "/scratch/$USER"
 [alice@dev1 alice]$ tar -x -f samtools-1.19.2.tar.bz2'
 ```
 
-2.    Create install location and configure
+2.  Create install location and configure
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo '[alice@dev1 ~]$ mkdir -p $HOME/software/samtools-1.14'
 echo '[alice@dev1 ~]$ ./configure --prefix=$HOME/software/samtools-1.14'
 ```
-3.    Build and install
+
+3.  Build and install
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo '[alice@dev1 ~]$ make'
@@ -358,9 +348,8 @@ echo '[alice@dev1 ~]$ make install'
 ## Install Nextflow
 
 -   Scientific workflow system with a community maintained set of [core bioinformatics analysis](https://nf-co.re/) pipelines
-    -   We will cover an example RNA-seq pipeline in part 2   
--   These can be configured to use the Wynton compute job submission system 
-
+    -   We will cover an example RNA-seq pipeline in part 2\
+-   These can be configured to use the Wynton compute job submission system
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo '[alice@dev1 ~]$ cd ~/software'
@@ -372,11 +361,8 @@ echo '[alice@dev1 ~]$ wget -qO- https://get.nextflow.io | bash'
 echo '[alice@dev1 ~]$ nextflow -v'
 ```
 
-
-
 # Containers
 
-
 ## Motivation {.small-bullets .small-picture}
 
 -   Compute heavy jobs (high RAM, multiple cores) should be run on compute nodes
@@ -386,25 +372,28 @@ echo '[alice@dev1 ~]$ nextflow -v'
 
 ![Compute Jobs](slide_materials/compute_job_workflow.png)
 
-
 ## Definitions {.small-bullets}
 
 -   **Containers:** An isolated environment for running software that is created from an *image* file, preventing conflicts with the host system.
--   **Images:**  An ordered collection of root filesystem changes that contain all necessary dependencies, ensuring software run identically across various computing platforms.
-
+-   **Images:** An ordered collection of root filesystem changes that contain all necessary dependencies, ensuring software run identically across various computing platforms.
 
 ## Apptainer {.small-bullets}
 
--   Wynton supports [Apptainer](https://wynton.ucsf.edu/hpc/software/apptainer.html) (formerly singularity) containers 
+-   Wynton supports [Apptainer](https://wynton.ucsf.edu/hpc/software/apptainer.html) (formerly singularity) containers
+
 -   [Docker](https://docs.docker.com/) is a commonly used image creation software, these can be turned into apptainer image files (.sif) easily
 
 -   apptainer run <image_file>
-    -   Run predefined script within container
--   apptainer exec <image_file> 
-    -   Execute any command within container
--   apptainer shell <image_file>
-    -   Run bash shell within container
 
+    -   Run predefined script within container
+
+-   apptainer exec <image_file>
+
+    -   Execute any command within container
+
+-   apptainer shell <image_file>
+
+    -   Run bash shell within container
 
 ## Example Container - Hello World
 
@@ -414,7 +403,7 @@ echo '[alice@dev1 ~]$ nextflow -v'
 echo '[alice@dev1 ~]$ apptainer pull docker://natalie23gill/hello-world:1.0'
 ```
 
-- Execute the "hi" command in the container
+-   Execute the "hi" command in the container
 
 ```{r, engine='bash', eval=TRUE, results='markup',comment=NA, highlight=TRUE, echo=FALSE}
 echo '[alice@dev1 ~]$ apptainer exec hello-world_1.0.sif hi'
@@ -428,7 +417,6 @@ echo '    __  __     ____         _       __           __    __   __
 /_/ /_/\___/_/_/\____/     |__/|__/\____/_/  /_/\__,_/  (_) '
 ```
 
-
 ## Example Container
 
 -   This container has **figlet** installed which creates ASCII art from text input
@@ -451,28 +439,22 @@ echo '[alice@dev1 ~]$ apptainer exec hello-world_1.0.sif figlet your_text'
 echo '[alice@dev1 ~]$ apptainer exec hello-world_1.0.sif cat /Dockerfile'
 ```
 
-
 # End of Part 1
 
 ## Thank You!
 
--   Please take some time to fill out the workshop survey if you are not attending part 2:   
-[https://www.surveymonkey.com/r/F75J6VZ](https://www.surveymonkey.com/r/F75J6VZ)
-
+-   Please take some time to fill out the workshop survey if you are not attending part 2:\
+    <https://www.surveymonkey.com/r/F75J6VZ>
 
 ## Upcoming Data Science Training Program Workshops
 
-
-[Introduction to Linear Mixed Effects Models](https://gladstone.org/events/introduction-linear-mixed-effects-models)   
+[Introduction to Linear Mixed Effects Models](https://gladstone.org/events/introduction-linear-mixed-effects-models)\
 April 25-April 26, 2024 1-3pm PDT
 
-[Single Cell RNA-Seq Data Analysis](https://gladstone.org/events/single-cell-rna-seq-data-analysis)     
+[Single Cell RNA-Seq Data Analysis](https://gladstone.org/events/single-cell-rna-seq-data-analysis)\
 April 29-April 30, 2024 9am-4pm PDT
 
-[Single Cell ATAC-Seq Data Analysis Part 1](https://gladstone.org/events/single-cell-atac-seq-data-analysis-part-1-1)    
+[Single Cell ATAC-Seq Data Analysis Part 1](https://gladstone.org/events/single-cell-atac-seq-data-analysis-part-1-1)\
 May 6-May 7, 2024 1-4pm PDT
 
-
-[Complete Schedule](https://gladstone.org/events?series=189)     
-
-
+[Complete Schedule](https://gladstone.org/events?series=189)
diff --git a/working-on-wynton-hpc/Working_on_Wynton_Part_2.Rmd b/working-on-wynton-hpc/Working_on_Wynton_Part_2.Rmd
index 523c03c..34fe4bd 100644
--- a/working-on-wynton-hpc/Working_on_Wynton_Part_2.Rmd
+++ b/working-on-wynton-hpc/Working_on_Wynton_Part_2.Rmd
@@ -25,12 +25,18 @@ output:
 <center>*Press the ? key for tips on navigating these slides*</center>
 
 ## Introductions
+Instructor:
 
-**Natalie Elphick**    
-Bioinformatician I   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Natalie Elphick**   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatician I*
 
-**Alex Pico (TA)**     
-Bioinformatics Core Director
+
+TAs:
+
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Alex Pico**    
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Bioinformatics Core Director*   
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**Michela Traglia**    
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*Senior Statistician* 
 
 
 ## Target Audience
@@ -244,7 +250,7 @@ Read the [querying jobs](https://wynton.ucsf.edu/hpc/scheduler/list-jobs.html) W
 
 ## Poll 3
 
-Anything that you can run on a compute node can be run on a development node.
+Any submitted job to compute nodes can also be run on development nodes.
 
 1.    True
 2.    False
@@ -417,6 +423,8 @@ alice1@log1.wynton.ucsf.edu:s password: XXXXXXXXXXXXXXXXXXX
 
 ## Bioinformatics Questions
 
+For any bioinformatics specific questions feel free to reach out to the Gladstone Bioinformatics Core.
+
 -   Email
     -   [bioinformatics@gladstone.ucsf.edu](mailto:bioinformatics@gladstone.ucsf.edu)
 -   Slack channel #questions-about-bioinformatics
@@ -431,6 +439,9 @@ alice1@log1.wynton.ucsf.edu:s password: XXXXXXXXXXXXXXXXXXX
 -   Please take some time to fill out the workshop survey:   
 [https://www.surveymonkey.com/r/F75J6VZ](https://www.surveymonkey.com/r/F75J6VZ)
 
+-   Want some additional Wynton training?    
+Check out the UCSF library [Introduction to Wynton HPC Cluster](https://calendars.library.ucsf.edu/event/12197724) Workshop
+
 
 ## Upcoming Data Science Training Program Workshops