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docs/Intro_to_R_data_analysis_part_1.html
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intro-r-data-analysis/Intro_to_R_data_analysis_part_1.Rmd
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@ -2,7 +2,8 @@
title: "Introduction to R Data Analysis"
subtitle: "Part 1"
author: "Natalie Gill"
date: "May 5th, 2025"
institute: "Gladstone Bioinformatics Core"
date: "August 21st, 2025"
knit: (function(input, ...) {
rmarkdown::render(
input,
@ -487,17 +488,18 @@ packages
## Workshop survey
- Please fill out our [workshop survey](https://www.surveymonkey.com/r/bioinfo-training) so we can continue to improve these workshops
## Upcoming Workshops
[Introduction to RNA-Seq](https://gladstone.org/events/introduction-rna-seq-0)
May 12-May 13, 2025 1:00-4:00pm PDT
[Intermediate RNA-Seq Analysis Using R](https://gladstone.org/events/intermediate-rna-seq-analysis-using-r-7)
May 19, 2025 1:00-4:00pm PDT
- Check [this link](https://gladstone.org/events?series=data-science-training-program) at for the full schedule
## Upcoming Workshops {.small}
**Introduction to Statistics, Experimental Design, and Hypothesis Testing**
August 25 - August 26, 2025 1:00-3:00pm PDT
**Introduction to RNA-Seq Analysis**
September 22-September 23, 2025 1:00-3:00pm PDT
**Introduction to Linear Mixed Effects Models**
September 29-September 30, 2025 1:00-3:00pm PDT
**Working on Wynton**
October 2-October 3, 2025 9:00am-12:00pm PDT

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intro-r-data-analysis/Intro_to_R_data_analysis_part_2.Rmd
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title: "Introduction to R Data Analysis"
subtitle: "Part 2"
author: "Natalie Gill"
date: "May 6th, 2025"
institute: "Gladstone Bioinformatics Core"
date: "August 22nd, 2025"
knit: (function(input, ...) {
rmarkdown::render(
input,
@ -303,17 +304,16 @@ Code templates can be used to avoid typing the same code over and over again.
## Workshop survey
- Please fill out our [workshop survey](https://www.surveymonkey.com/r/bioinfo-training) so we can continue to improve these workshops
## Upcoming Workshops
[Introduction to RNA-Seq](https://gladstone.org/events/introduction-rna-seq-0)
May 12-May 13, 2025 1:00-4:00pm PDT
[Intermediate RNA-Seq Analysis Using R](https://gladstone.org/events/intermediate-rna-seq-analysis-using-r-7)
May 19, 2025 1:00-4:00pm PDT
- Check [this link](https://gladstone.org/events?series=data-science-training-program) at for the full schedule
## Upcoming Workshops {.small}
**Introduction to Statistics, Experimental Design, and Hypothesis Testing**
August 25 - August 26, 2025 1:00-3:00pm PDT
**Introduction to RNA-Seq Analysis**
September 22-September 23, 2025 1:00-3:00pm PDT
**Introduction to Linear Mixed Effects Models**
September 29-September 30, 2025 1:00-3:00pm PDT
**Working on Wynton**
October 2-October 3, 2025 9:00am-12:00pm PDT

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intro-r-data-analysis/lesson_0/lesson_0.Rmd
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@ -33,7 +33,7 @@ Please complete the following steps (must be done in this order). If you already
4. [Install required packages](#install-required-packages)
5. [Run verification test](#run-verification-test)
Please consult the links provided for additional tips, and feel free to reach out for help by email [me](mailto:natalie.elphick@gladstone.ucsf.edu) if you get stuck.
Please consult the links provided for additional tips, and feel free to reach out for help by email [me](mailto:natalie.gill@gladstone.ucsf.edu) if you get stuck.
## Install R

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intro-r-data-analysis/lesson_0/rsconnect/documents/lesson_0.Rmd/shinyapps.io/natalie-elphick/lesson_0.dcf Normal file
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name: lesson_0
title: lesson_0
username: natalie-elphick
account: natalie-elphick
server: shinyapps.io
hostUrl: https://api.shinyapps.io/v1
appId: 10952169
bundleId: 10787256
url: https://natalie-elphick.shinyapps.io/lesson_0/
version: 1
asMultiple: FALSE
asStatic: FALSE

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@ -33,68 +30,109 @@ pre, code, kbd, samp {
font-family: "Courier New", Courier, monospace;
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white-space: pre !important;
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font-weight: normal !important;
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font-weight: bold;
color: #0072B2;
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font-weight: bold !important;
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color: #333;
font-weight: normal !important;
font-size: 1.6em !important; /* Keep consistent with new H2 size */
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text-align: left;
margin-left: 20px !important;
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@ -130,7 +168,7 @@ small {
border: 1px solid black !important;
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font-size: 70%;
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