fork_scRNAseq_analysis/pipelines
veghp 9c72e400ba
Get correct DM1-3 coordinates
Original version took DM0-2.
2019-09-10 12:37:40 +01:00
..
00_integrate_new_pipeline scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
01_seurat_from_count_tables scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
02_make_cell_annotation_template scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
03_split_seurat_by_category scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
04_merge_seurat_objects scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
05_subset_seurat scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
06_add_dr scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
07_compute_DEG scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
08_violin_plots scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
09_gene_heatmap_and_spotplot scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
10_seurat_to_interactive_gene_expression scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
11_plot_dr scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
12_gene_discriminatory_power_analysis scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
13_pseudotime scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
14_fdg_animation_write_input scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
15_train_classifier scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
16_train_doublets_classifier scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
17_pull_data_subset_from_seurat scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
18_clustering_comparison scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
19_batch_correction scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
20_wordclouds scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
21_update_annotation scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
22_cell_comparison scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
23_super_markers scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
24_scanpy_to_seurat scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
25_multiple_AGAs scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
90_web_portal scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
91_interactive_heatmap_dotplot scRNA-seq_analysis 2019-07-08 12:22:01 +01:00
92_pseudotime_webportal Get correct DM1-3 coordinates 2019-09-10 12:37:40 +01:00
93_gene_grouping scRNA-seq_analysis 2019-07-08 12:22:01 +01:00