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update for March 2025
This commit is contained in:
Natalie Elphick
parent
76aa785337
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2eaaca919e
5 changed files with 66 additions and 48 deletions
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@ -574,7 +574,7 @@ document.addEventListener('DOMContentLoaded', function(e) {
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<h1 class="title">Working on Wynton</h1>
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<h1 class="subtitle">Part 1</h1>
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<h2 class="author">Natalie Elphick</h2>
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<h3 class="date">December 5th, 2024</h3>
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<h3 class="date">March 24th, 2025</h3>
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</section>
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<section id="section" class="slide level2">
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@ -587,12 +587,7 @@ document.addEventListener('DOMContentLoaded', function(e) {
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<h2>Introductions</h2>
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<p>Instructor:</p>
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<p> <strong>Natalie Elphick</strong><br />
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<em>Bioinformatician I</em></p>
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<p>TAs:</p>
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<p> <strong>Alex Pico</strong><br />
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<em>Bioinformatics Core Director</em><br />
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<strong>Michela Traglia</strong><br />
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<em>Senior Statistician</em></p>
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<em>Bioinformatician II</em></p>
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</section>
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<section id="target-audience" class="slide level2">
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<h2>Target Audience</h2>
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@ -645,8 +640,8 @@ research groups</li>
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<p><a href="https://wynton.ucsf.edu" class="uri">https://wynton.ucsf.edu</a></p>
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</section></section>
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<section>
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<section id="node-types-and-logging-in" class="title-slide slide level1">
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<h1>Node Types and Logging in</h1>
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<section id="node-types-logging-in" class="title-slide slide level1">
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<h1>Node Types & Logging in</h1>
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</section>
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<section id="node-types" class="slide level2 small-bullets">
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@ -1094,14 +1089,24 @@ run:</li>
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<h2>Thank You!</h2>
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<ul>
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<li>Please take some time to fill out the workshop survey if you are not
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attending part 2:<br />
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<a href="https://www.surveymonkey.com/r/bioinfo-training" class="uri">https://www.surveymonkey.com/r/bioinfo-training</a></li>
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attending part 2:</li>
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</ul>
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<p><a href="https://www.surveymonkey.com/r/bioinfo-training" class="uri">https://www.surveymonkey.com/r/bioinfo-training</a></p>
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</section>
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<section id="upcoming-data-science-training-program-workshops" class="slide level2">
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<h2>Upcoming Data Science Training Program Workshops</h2>
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<p>This is our last workshop for 2024, please check the link below for
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future workshop dates.</p>
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<p><a href="https://gladstone.org/index.php/events/single-cell-rna-seq-analysis-5">Single
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Cell RNA-Seq Analysis</a><br />
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March 27-March 28, 2025 9:00-12:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-linear-mixed-effects-models-1">Introduction
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to Linear Mixed Effects Models</a><br />
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April 3-April 4, 2025 1:00-3:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-scatac-seq-data-analysis-0">Introduction
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to scATAC-seq Data Analysis</a><br />
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April 17-April 18, 2025 9:00am-12:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-pathway-analysis-3">Introduction
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to Pathway Analysis</a><br />
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April 22, 2025 1:00-4:00pm PDT</p>
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<p><a href="https://gladstone.org/events?series=189">Complete
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Schedule</a></p>
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</section></section>
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@ -637,7 +637,7 @@ document.addEventListener('DOMContentLoaded', function(e) {
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<h1 class="title">Working on Wynton</h1>
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<h1 class="subtitle">Part 2</h1>
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<h2 class="author">Natalie Elphick</h2>
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<h3 class="date">December 6th, 2024</h3>
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<h3 class="date">March 25th, 2025</h3>
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</section>
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<section id="section" class="slide level2">
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@ -650,12 +650,7 @@ document.addEventListener('DOMContentLoaded', function(e) {
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<h2>Introductions</h2>
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<p>Instructor:</p>
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<p> <strong>Natalie Elphick</strong><br />
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<em>Bioinformatician I</em></p>
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<p>TAs:</p>
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<p> <strong>Alex Pico</strong><br />
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<em>Bioinformatics Core Director</em><br />
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<strong>Michela Traglia</strong><br />
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<em>Senior Statistician</em></p>
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<em>Bioinformatician II</em></p>
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</section>
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<section id="target-audience" class="slide level2">
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<h2>Target Audience</h2>
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@ -1303,14 +1298,24 @@ list retrieval and install commands together</li>
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<section id="thank-you" class="slide level2">
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<h2>Thank You!</h2>
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<ul>
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<li>Please take some time to fill out the workshop survey:<br />
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<a href="https://www.surveymonkey.com/r/bioinfo-training" class="uri">https://www.surveymonkey.com/r/bioinfo-training</a></li>
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<li>Please take some time to fill out the workshop survey:</li>
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</ul>
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<p><a href="https://www.surveymonkey.com/r/bioinfo-training" class="uri">https://www.surveymonkey.com/r/bioinfo-training</a></p>
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</section>
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<section id="upcoming-data-science-training-program-workshops" class="slide level2">
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<h2>Upcoming Data Science Training Program Workshops</h2>
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<p>This is our last workshop for 2024, please check the link below for
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future workshop dates.</p>
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<p><a href="https://gladstone.org/index.php/events/single-cell-rna-seq-analysis-5">Single
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Cell RNA-Seq Analysis</a><br />
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March 27-March 28, 2025 9:00-12:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-linear-mixed-effects-models-1">Introduction
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to Linear Mixed Effects Models</a><br />
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April 3-April 4, 2025 1:00-3:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-scatac-seq-data-analysis-0">Introduction
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to scATAC-seq Data Analysis</a><br />
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April 17-April 18, 2025 9:00am-12:00pm PDT</p>
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<p><a href="https://gladstone.org/index.php/events/introduction-pathway-analysis-3">Introduction
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to Pathway Analysis</a><br />
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April 22, 2025 1:00-4:00pm PDT</p>
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<p><a href="https://gladstone.org/events?series=189">Complete
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Schedule</a></p>
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</section></section>
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@ -2,7 +2,7 @@
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title: "Working on Wynton"
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subtitle: "Part 1"
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author: "Natalie Elphick"
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date: "December 5th, 2024"
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date: "March 24th, 2025"
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knit: (function(input, ...) {
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rmarkdown::render(
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input,
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@ -28,16 +28,9 @@ knitr::opts_chunk$set(comment = "")
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Instructor:
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**Natalie Elphick**
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*Bioinformatician I*
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*Bioinformatician II*
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TAs:
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**Alex Pico**
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*Bioinformatics Core Director*
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**Michela Traglia**
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*Senior Statistician*
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## Target Audience
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- Prior experience with UNIX command-line
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@ -75,7 +68,7 @@ TAs:
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<https://wynton.ucsf.edu>
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# Node Types and Logging in
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# Node Types & Logging in
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## Node Types {.small-bullets}
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@ -429,10 +422,21 @@ echo '[alice@dev1 ~]$ apptainer exec hello-world_1.0.sif cat /Dockerfile'
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## Thank You!
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- Please take some time to fill out the workshop survey if you are not attending part 2:
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<https://www.surveymonkey.com/r/bioinfo-training>
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<https://www.surveymonkey.com/r/bioinfo-training>
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## Upcoming Data Science Training Program Workshops
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This is our last workshop for 2024, please check the link below for future workshop dates.
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[Single Cell RNA-Seq Analysis](https://gladstone.org/index.php/events/single-cell-rna-seq-analysis-5)
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March 27-March 28, 2025 9:00-12:00pm PDT
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[Introduction to Linear Mixed Effects Models](https://gladstone.org/index.php/events/introduction-linear-mixed-effects-models-1)
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April 3-April 4, 2025 1:00-3:00pm PDT
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[Introduction to scATAC-seq Data Analysis](https://gladstone.org/index.php/events/introduction-scatac-seq-data-analysis-0)
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April 17-April 18, 2025 9:00am-12:00pm PDT
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[Introduction to Pathway Analysis](https://gladstone.org/index.php/events/introduction-pathway-analysis-3)
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April 22, 2025 1:00-4:00pm PDT
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[Complete Schedule](https://gladstone.org/events?series=189)
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@ -2,7 +2,7 @@
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title: "Working on Wynton"
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subtitle: "Part 2"
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author: "Natalie Elphick"
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date: "December 6th, 2024"
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date: "March 25th, 2025"
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knit: (function(input, ...) {
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rmarkdown::render(
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input,
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@ -28,16 +28,9 @@ knitr::opts_chunk$set(comment = "")
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Instructor:
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**Natalie Elphick**
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*Bioinformatician I*
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*Bioinformatician II*
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TAs:
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**Alex Pico**
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*Bioinformatics Core Director*
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**Michela Traglia**
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*Senior Statistician*
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## Target Audience
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- Prior experience with UNIX command-line
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@ -491,14 +484,24 @@ echo "[alice@dev1 ~]$ apptainer pull docker://docker_hub_user/seurat-harmony:1.0
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- Please take some time to fill out the workshop survey:
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<https://www.surveymonkey.com/r/bioinfo-training>
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<https://www.surveymonkey.com/r/bioinfo-training>
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## Upcoming Data Science Training Program Workshops
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This is our last workshop for 2024, please check the link below for future workshop dates.
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[Single Cell RNA-Seq Analysis](https://gladstone.org/index.php/events/single-cell-rna-seq-analysis-5)
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March 27-March 28, 2025 9:00-12:00pm PDT
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[Introduction to Linear Mixed Effects Models](https://gladstone.org/index.php/events/introduction-linear-mixed-effects-models-1)
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April 3-April 4, 2025 1:00-3:00pm PDT
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[Introduction to scATAC-seq Data Analysis](https://gladstone.org/index.php/events/introduction-scatac-seq-data-analysis-0)
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April 17-April 18, 2025 9:00am-12:00pm PDT
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[Introduction to Pathway Analysis](https://gladstone.org/index.php/events/introduction-pathway-analysis-3)
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April 22, 2025 1:00-4:00pm PDT
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[Complete Schedule](https://gladstone.org/events?series=189)
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@ -1,4 +1,5 @@
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Version: 1.0
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ProjectId: 34071a3d-003e-4263-bd00-68a4cf53c544
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RestoreWorkspace: Default
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SaveWorkspace: Default
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