Delete all_steps.sh

intro-rna-seq/all_steps.sh

@@ -1,28 +0,0 @@
-#!/bin/bash
-
-fastqc Bacteria_GATTACA_L001_R1_001.fastq
-
-cutadapt \
--a file:Adapter_Sequence.fasta \
--o trimmed.fastq \
-Bacteria_GATTACA_L001_R1_001.fastq
-
-fastqc trimmed.fastq
-
-mkdir star_index
-
-STAR \
---runMode genomeGenerate \
---genomeDir ./star_index \
---genomeFastaFiles rDNA_sequence.fasta \
---genomeSAindexNbases 3
-
-STAR \
---genomeDir ./star_index \
---readFilesIn ./trimmed.fastq
-
-featureCounts \
--a rDNA.gtf \
--t CDS \
--o counts.txt \
-Aligned.out.sam